RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 AKAP2Q9Y2D5 859 aa9.3□□□□□ -0.92
CCDC39-206ENST00000489868 USP17L7P0C7H9 530 aa9.29□□□□□ -0.92
CCDC39-206ENST00000489868 SRCIN1Q9C0H9 1055 aa9.29□□□□□ -0.92
CCDC39-206ENST00000489868 GIPC1O14908 333 aa9.28□□□□□ -0.92
CCDC39-206ENST00000489868 FBXO24O75426 580 aa9.28□□□□□ -0.92
CCDC39-206ENST00000489868 XRCC5P13010 732 aaKnown RBP9.28□□□□□ -0.92
CCDC39-206ENST00000489868 GSTT1P30711 240 aa9.28□□□□□ -0.92
CCDC39-206ENST00000489868 PPP4R2Q9NY27 417 aa9.28□□□□□ -0.92
CCDC39-206ENST00000489868 AK5Q9Y6K8 562 aa9.28□□□□□ -0.92
CCDC39-206ENST00000489868 MAOBP27338 520 aa9.27□□□□□ -0.93
CCDC39-206ENST00000489868 DAB2P98082 770 aa9.27□□□□□ -0.93
CCDC39-206ENST00000489868 DZIP1LQ8IYY4 767 aaKnown RBP9.27□□□□□ -0.93
CCDC39-206ENST00000489868 STK35Q8TDR2 534 aa9.27□□□□□ -0.93
CCDC39-206ENST00000489868 UBL7Q96S82 380 aaPredicted RBP9.27□□□□□ -0.93
CCDC39-206ENST00000489868 FAM8A1Q9UBU6 413 aa9.27□□□□□ -0.93
CCDC39-206ENST00000489868 TPTE2Q6XPS3 522 aa9.26□□□□□ -0.93
CCDC39-206ENST00000489868 FRMD6Q96NE9 622 aa9.26□□□□□ -0.93
CCDC39-206ENST00000489868 BCL2L13Q9BXK5 485 aa9.26□□□□□ -0.93
CCDC39-206ENST00000489868 TMPRSS13Q9BYE2 586 aa9.26□□□□□ -0.93
CCDC39-206ENST00000489868 GPN3Q9UHW5 284 aaPredicted RBP9.26□□□□□ -0.93
CCDC39-206ENST00000489868 ENC1O14682 589 aa9.25□□□□□ -0.93
CCDC39-206ENST00000489868 PAGE1O75459 146 aa9.25□□□□□ -0.93
CCDC39-206ENST00000489868 CTSHP09668 335 aa9.25□□□□□ -0.93
CCDC39-206ENST00000489868 GLB1P16278 677 aa9.25□□□□□ -0.93
CCDC39-206ENST00000489868 EIF4BP23588 611 aaKnown RBP9.25□□□□□ -0.93
CCDC39-206ENST00000489868 TMC4Q7Z404 712 aa9.25□□□□□ -0.93
CCDC39-206ENST00000489868 GIPC2Q8TF65 315 aa9.25□□□□□ -0.93
CCDC39-206ENST00000489868 RUSC1Q9BVN2 902 aa9.25□□□□□ -0.93
CCDC39-206ENST00000489868 TMEM39AQ9NV64 488 aa9.25□□□□□ -0.93
CCDC39-206ENST00000489868 POU4F3Q15319 338 aa9.24□□□□□ -0.93
CCDC39-206ENST00000489868 NECAB3Q96P71 396 aaPredicted RBP9.24□□□□□ -0.93
CCDC39-206ENST00000489868 MEGF11A6BM72 1044 aa9.23□□□□□ -0.93
CCDC39-206ENST00000489868 CYP11A1P05108 521 aa9.23□□□□□ -0.93
CCDC39-206ENST00000489868 FURINP09958 794 aa9.23□□□□□ -0.93
CCDC39-206ENST00000489868 FGD1P98174 961 aa9.23□□□□□ -0.93
CCDC39-206ENST00000489868 PSMD2Q13200 908 aa9.23□□□□□ -0.93
CCDC39-206ENST00000489868 RSPO4Q2I0M5 234 aaPredicted RBP9.23□□□□□ -0.93
CCDC39-206ENST00000489868 NKAPLQ5M9Q1 402 aa9.23□□□□□ -0.93
CCDC39-206ENST00000489868 PDZD3Q86UT5 571 aa9.23□□□□□ -0.93
CCDC39-206ENST00000489868 RNF208Q9H0X6 261 aa9.23□□□□□ -0.93
CCDC39-206ENST00000489868 ZFYVE1Q9HBF4 777 aa9.23□□□□□ -0.93
CCDC39-206ENST00000489868 PPM1HQ9ULR3 514 aa9.23□□□□□ -0.93
CCDC39-206ENST00000489868 CELA3AP09093 270 aa9.22□□□□□ -0.93
CCDC39-206ENST00000489868 PREPP48147 710 aa9.22□□□□□ -0.93
CCDC39-206ENST00000489868 MEI1Q5TIA1 1274 aa9.22□□□□□ -0.93
CCDC39-206ENST00000489868 RASIP1Q5U651 963 aa9.22□□□□□ -0.93
CCDC39-206ENST00000489868 ARMC10Q8N2F6 343 aa9.22□□□□□ -0.93
CCDC39-206ENST00000489868 ANKRD24Q8TF21 1146 aa9.22□□□□□ -0.93
CCDC39-206ENST00000489868 TP53INP1Q96A56 240 aa9.22□□□□□ -0.93
CCDC39-206ENST00000489868 XPCQ01831 940 aaPredicted RBP9.21□□□□□ -0.94
CCDC39-206ENST00000489868 AP3B2Q13367 1082 aa9.21□□□□□ -0.94
CCDC39-206ENST00000489868 WDR89Q96FK6 387 aaPredicted RBP9.21□□□□□ -0.94
CCDC39-206ENST00000489868 FAM46AQ96IP4 442 aaKnown RBP9.21□□□□□ -0.94
CCDC39-206ENST00000489868 CORO1BQ9BR76 489 aa9.21□□□□□ -0.94
CCDC39-206ENST00000489868 ZC3H12CQ9C0D7 883 aaKnown RBP9.21□□□□□ -0.94
CCDC39-206ENST00000489868 TIAF1O95411 115 aa9.2□□□□□ -0.94
CCDC39-206ENST00000489868 DRD2P14416 443 aa9.2□□□□□ -0.94
CCDC39-206ENST00000489868 ZNF16P17020 682 aaPredicted RBP9.2□□□□□ -0.94
CCDC39-206ENST00000489868 PPP2R3AQ06190 1150 aa9.2□□□□□ -0.94
CCDC39-206ENST00000489868 EXOSC6Q5RKV6 272 aaKnown RBP9.2□□□□□ -0.94
CCDC39-206ENST00000489868 MPRIPQ6WCQ1 1025 aa9.2□□□□□ -0.94
CCDC39-206ENST00000489868 SULF2Q8IWU5 870 aa9.2□□□□□ -0.94
CCDC39-206ENST00000489868 CCDC86Q9H6F5 360 aaKnown RBP9.2□□□□□ -0.94
CCDC39-206ENST00000489868 SUGCTQ9HAC7 445 aa9.2□□□□□ -0.94
CCDC39-206ENST00000489868 GSTP1P09211 210 aaKnown RBP9.19□□□□□ -0.94
CCDC39-206ENST00000489868 BMP6P22004 513 aa9.19□□□□□ -0.94
CCDC39-206ENST00000489868 ITGB7P26010 798 aa9.19□□□□□ -0.94
CCDC39-206ENST00000489868 NUTM2GQ5VZR2 741 aa9.19□□□□□ -0.94
CCDC39-206ENST00000489868 SMG8Q8ND04 991 aaKnown RBP9.19□□□□□ -0.94
CCDC39-206ENST00000489868 DDX54Q8TDD1 881 aaKnown RBP9.19□□□□□ -0.94
CCDC39-206ENST00000489868 TTF2Q9UNY4 1162 aaKnown RBP9.19□□□□□ -0.94
CCDC39-206ENST00000489868 ZNF862O60290 1169 aa9.18□□□□□ -0.94
CCDC39-206ENST00000489868 SORBS3O60504 671 aa9.18□□□□□ -0.94
CCDC39-206ENST00000489868 NME2P22392 152 aa9.18□□□□□ -0.94
CCDC39-206ENST00000489868 ANKRD34AQ69YU3 496 aa9.18□□□□□ -0.94
CCDC39-206ENST00000489868 GRIN3AQ8TCU5 1115 aa9.18□□□□□ -0.94
CCDC39-206ENST00000489868 CEP41Q9BYV8 373 aa9.18□□□□□ -0.94
CCDC39-206ENST00000489868 CEP44Q9C0F1 390 aa9.18□□□□□ -0.94
CCDC39-206ENST00000489868 EIF4EBP3O60516 100 aaPredicted RBP9.17□□□□□ -0.94
CCDC39-206ENST00000489868 ARNTP27540 789 aa9.17□□□□□ -0.94
CCDC39-206ENST00000489868 ZNF252P-AS1Q0IIN9 211 aa9.17□□□□□ -0.94
CCDC39-206ENST00000489868 FDX2Q6P4F2 183 aa9.17□□□□□ -0.94
CCDC39-206ENST00000489868 RGS22Q8NE09 1264 aa9.17□□□□□ -0.94
CCDC39-206ENST00000489868 WDR18Q9BV38 432 aa9.17□□□□□ -0.94
CCDC39-206ENST00000489868 DYRK3O43781 588 aa9.16□□□□□ -0.94
CCDC39-206ENST00000489868 AOC2O75106 756 aa9.16□□□□□ -0.94
CCDC39-206ENST00000489868 LIG1P18858 919 aa9.16□□□□□ -0.94
CCDC39-206ENST00000489868 MRPL58Q14197 206 aaKnown RBP9.16□□□□□ -0.94
CCDC39-206ENST00000489868 PDE3AQ14432 1141 aa9.16□□□□□ -0.94
CCDC39-206ENST00000489868 C12orf50Q8NA57 414 aaPredicted RBP9.16□□□□□ -0.94
CCDC39-206ENST00000489868 C2CD4AQ8NCU7 369 aaPredicted RBP9.16□□□□□ -0.94
CCDC39-206ENST00000489868 VTI1BQ9UEU0 232 aa9.16□□□□□ -0.94
CCDC39-206ENST00000489868 ADH5P11766 374 aa9.15□□□□□ -0.94
CCDC39-206ENST00000489868 ZNF326Q5BKZ1 582 aaKnown RBP9.15□□□□□ -0.94
CCDC39-206ENST00000489868 PCNX4Q63HM2 1172 aa9.15□□□□□ -0.94
CCDC39-206ENST00000489868 MAP1SQ66K74 1059 aaPredicted RBP9.15□□□□□ -0.94
CCDC39-206ENST00000489868 PRR23CQ6ZRP0 262 aa9.15□□□□□ -0.94
CCDC39-206ENST00000489868 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.15□□□□□ -0.94
CCDC39-206ENST00000489868 UTP4Q969X6 686 aaKnown RBP9.15□□□□□ -0.94
CCDC39-206ENST00000489868 CRELD1Q96HD1 420 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms