RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 RCOR1Q9UKL0 485 aa17.53■□□□□ 0.4
COL9A1-208ENST00000489611 CARMIL3Q8ND23 1372 aa17.52■□□□□ 0.4
COL9A1-208ENST00000489611 FAM177BA6PVY3 158 aa17.52■□□□□ 0.4
COL9A1-208ENST00000489611 CTAGE5O15320 804 aa17.52■□□□□ 0.4
COL9A1-208ENST00000489611 HCLS1P14317 486 aaPredicted RBP17.52■□□□□ 0.4
COL9A1-208ENST00000489611 SPATA5Q8NB90 893 aa17.52■□□□□ 0.4
COL9A1-208ENST00000489611 KDM4AO75164 1064 aa17.51■□□□□ 0.39
COL9A1-208ENST00000489611 IDH1O75874 414 aaKnown RBP17.51■□□□□ 0.39
COL9A1-208ENST00000489611 PDE6AP16499 860 aa17.51■□□□□ 0.39
COL9A1-208ENST00000489611 GNAT2P19087 354 aa17.51■□□□□ 0.39
COL9A1-208ENST00000489611 GIMAP6Q6P9H5 292 aa17.51■□□□□ 0.39
COL9A1-208ENST00000489611 TMEM87BQ96K49 555 aa17.51■□□□□ 0.39
COL9A1-208ENST00000489611 CDC5LQ99459 802 aaKnown RBP17.51■□□□□ 0.39
COL9A1-208ENST00000489611 CLSTN2Q9H4D0 955 aa17.51■□□□□ 0.39
COL9A1-208ENST00000489611 TFIP11Q9UBB9 837 aaKnown RBP17.51■□□□□ 0.39
COL9A1-208ENST00000489611 RTCBQ9Y3I0 505 aaKnown RBP17.51■□□□□ 0.39
COL9A1-208ENST00000489611 CDKL5O76039 1030 aa17.51■□□□□ 0.39
COL9A1-208ENST00000489611 TPM3P06753 285 aa17.51■□□□□ 0.39
COL9A1-208ENST00000489611 PHKA1P46020 1223 aa17.51■□□□□ 0.39
COL9A1-208ENST00000489611 CCT2P78371 535 aaKnown RBP17.51■□□□□ 0.39
COL9A1-208ENST00000489611 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.51■□□□□ 0.39
COL9A1-208ENST00000489611 BICD2Q8TD16 824 aa17.51■□□□□ 0.39
COL9A1-208ENST00000489611 AIDAQ96BJ3 306 aa17.51■□□□□ 0.39
COL9A1-208ENST00000489611 DACT1Q9NYF0 836 aa17.51■□□□□ 0.39
COL9A1-208ENST00000489611 ZNF532Q9HCE3 1301 aa17.5■□□□□ 0.39
COL9A1-208ENST00000489611 TCRBV5S4A2TA0A5A2 114 aa17.5■□□□□ 0.39
COL9A1-208ENST00000489611 PTMAP06454 111 aaKnown RBP17.5■□□□□ 0.39
COL9A1-208ENST00000489611 FAM173BQ6P4H8 233 aa17.5■□□□□ 0.39
COL9A1-208ENST00000489611 PI16Q6UXB8 463 aa17.5■□□□□ 0.39
COL9A1-208ENST00000489611 BRAPQ7Z569 592 aa17.5■□□□□ 0.39
COL9A1-208ENST00000489611 PROM2Q8N271 834 aa17.5■□□□□ 0.39
COL9A1-208ENST00000489611 FAM200AQ8TCP9 573 aa17.5■□□□□ 0.39
COL9A1-208ENST00000489611 CNNM2Q9H8M5 875 aa17.5■□□□□ 0.39
COL9A1-208ENST00000489611 PIH1D3Q9NQM4 214 aaKnown RBP17.5■□□□□ 0.39
COL9A1-208ENST00000489611 SRP68Q9UHB9 627 aaKnown RBP17.5■□□□□ 0.39
COL9A1-208ENST00000489611 NAP1L2Q9ULW6 460 aaPredicted RBP17.5■□□□□ 0.39
COL9A1-208ENST00000489611 ANGEL1Q9UNK9 670 aaKnown RBP17.5■□□□□ 0.39
COL9A1-208ENST00000489611 NIP7Q9Y221 180 aaKnown RBP eCLIP17.5■□□□□ 0.39
COL9A1-208ENST00000489611 CPLX1O14810 134 aa17.49■□□□□ 0.39
COL9A1-208ENST00000489611 NTSR2O95665 410 aa17.49■□□□□ 0.39
COL9A1-208ENST00000489611 CPLX2Q6PUV4 134 aaKnown RBP17.49■□□□□ 0.39
COL9A1-208ENST00000489611 MTA3Q9BTC8 594 aa17.49■□□□□ 0.39
COL9A1-208ENST00000489611 KLF18A0A0U1RQI7 1052 aa17.49■□□□□ 0.39
COL9A1-208ENST00000489611 PATL2C9JE40 543 aaKnown RBP17.49■□□□□ 0.39
COL9A1-208ENST00000489611 APBA3O96018 575 aa17.49■□□□□ 0.39
COL9A1-208ENST00000489611 LIG1P18858 919 aa17.49■□□□□ 0.39
COL9A1-208ENST00000489611 ADD1P35611 737 aaKnown RBP17.49■□□□□ 0.39
COL9A1-208ENST00000489611 HAND2P61296 217 aa17.49■□□□□ 0.39
COL9A1-208ENST00000489611 ARHGEF1Q92888 912 aaKnown RBP17.49■□□□□ 0.39
COL9A1-208ENST00000489611 STRBPQ96SI9 672 aaKnown RBP17.49■□□□□ 0.39
COL9A1-208ENST00000489611 BCL2L12Q9HB09 334 aa17.49■□□□□ 0.39
COL9A1-208ENST00000489611 GOLGA8BA8MQT2 603 aa17.48■□□□□ 0.39
COL9A1-208ENST00000489611 TERF1P54274 439 aa17.48■□□□□ 0.39
COL9A1-208ENST00000489611 TXNRD1Q16881 649 aa17.48■□□□□ 0.39
COL9A1-208ENST00000489611 SLC27A3Q5K4L6 730 aa17.48■□□□□ 0.39
COL9A1-208ENST00000489611 USP25Q9UHP3 1055 aa17.48■□□□□ 0.39
COL9A1-208ENST00000489611 MYO5AQ9Y4I1 1855 aaKnown RBP17.48■□□□□ 0.39
COL9A1-208ENST00000489611 A0A0G2JLW4 131 aa17.47■□□□□ 0.39
COL9A1-208ENST00000489611 OFD1O75665 1012 aa17.47■□□□□ 0.39
COL9A1-208ENST00000489611 APPP05067 770 aa17.47■□□□□ 0.39
COL9A1-208ENST00000489611 SASS6Q6UVJ0 657 aa17.47■□□□□ 0.39
COL9A1-208ENST00000489611 PGBD1Q96JS3 809 aa17.47■□□□□ 0.39
COL9A1-208ENST00000489611 NACAP1Q9BZK3 213 aa17.47■□□□□ 0.39
COL9A1-208ENST00000489611 NCOA5Q9HCD5 579 aaKnown RBP17.47■□□□□ 0.39
COL9A1-208ENST00000489611 NARFQ9UHQ1 456 aa17.47■□□□□ 0.39
COL9A1-208ENST00000489611 C4BP0C0L5 1744 aa17.47■□□□□ 0.39
COL9A1-208ENST00000489611 PNPLA7Q6ZV29 1317 aa17.47■□□□□ 0.39
COL9A1-208ENST00000489611 TIAM2Q8IVF5 1701 aa17.47■□□□□ 0.39
COL9A1-208ENST00000489611 ADCY5O95622 1261 aa17.47■□□□□ 0.39
COL9A1-208ENST00000489611 ANTXR2P58335 489 aa17.47■□□□□ 0.39
COL9A1-208ENST00000489611 TYRO3Q06418 890 aa17.47■□□□□ 0.39
COL9A1-208ENST00000489611 BICDL1Q6ZP65 573 aa17.47■□□□□ 0.39
COL9A1-208ENST00000489611 CHST3Q7LGC8 479 aa17.47■□□□□ 0.39
COL9A1-208ENST00000489611 FBXO18Q8NFZ0 1043 aa17.47■□□□□ 0.39
COL9A1-208ENST00000489611 C8orf76Q96K31 380 aa17.47■□□□□ 0.39
COL9A1-208ENST00000489611 CHD4Q14839 1912 aa17.46■□□□□ 0.39
COL9A1-208ENST00000489611 TAF1LQ8IZX4 1826 aa17.46■□□□□ 0.39
COL9A1-208ENST00000489611 GOLGA6L6A8MZA4 724 aa17.46■□□□□ 0.39
COL9A1-208ENST00000489611 DTNBO60941 627 aa17.46■□□□□ 0.39
COL9A1-208ENST00000489611 FDPSP14324 419 aaKnown RBP17.46■□□□□ 0.39
COL9A1-208ENST00000489611 RASGRF1Q13972 1273 aa17.46■□□□□ 0.39
COL9A1-208ENST00000489611 CCDC73Q6ZRK6 1079 aa17.46■□□□□ 0.39
COL9A1-208ENST00000489611 KRT23Q9C075 422 aa17.46■□□□□ 0.39
COL9A1-208ENST00000489611 GNL3LQ9NVN8 582 aaKnown RBP17.46■□□□□ 0.39
COL9A1-208ENST00000489611 RTEL1Q9NZ71 1219 aa17.46■□□□□ 0.39
COL9A1-208ENST00000489611 HPS5Q9UPZ3 1129 aa17.46■□□□□ 0.39
COL9A1-208ENST00000489611 ZPR1O75312 459 aa17.45■□□□□ 0.38
COL9A1-208ENST00000489611 C4AP0C0L4 1744 aa17.45■□□□□ 0.38
COL9A1-208ENST00000489611 LIFRP42702 1097 aa17.45■□□□□ 0.38
COL9A1-208ENST00000489611 TRAPPC3LQ5T215 181 aa17.45■□□□□ 0.38
COL9A1-208ENST00000489611 TBC1D9BQ66K14 1250 aa17.45■□□□□ 0.38
COL9A1-208ENST00000489611 TMED8Q6PL24 325 aaPredicted RBP17.45■□□□□ 0.38
COL9A1-208ENST00000489611 SGMS1Q86VZ5 419 aa17.45■□□□□ 0.38
COL9A1-208ENST00000489611 KCNG4Q8TDN1 519 aa17.45■□□□□ 0.38
COL9A1-208ENST00000489611 ORC3Q9UBD5 711 aaPredicted RBP17.45■□□□□ 0.38
COL9A1-208ENST00000489611 YEATS4O95619 227 aa17.45■□□□□ 0.38
COL9A1-208ENST00000489611 SF3B3Q15393 1217 aaKnown RBP17.45■□□□□ 0.38
COL9A1-208ENST00000489611 NAPBQ9H115 298 aa17.45■□□□□ 0.38
COL9A1-208ENST00000489611 POLR3EQ9NVU0 708 aa17.45■□□□□ 0.38
COL9A1-208ENST00000489611 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms