RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 LDHBP07195 334 aaKnown RBP21.31■■□□□ 1
MDC1-206ENST00000489540 ARID4AP29374 1257 aaPredicted RBP21.31■■□□□ 1
MDC1-206ENST00000489540 HHIPL2Q6UWX4 724 aa21.31■■□□□ 1
MDC1-206ENST00000489540 RHPN1Q8TCX5 695 aa21.31■■□□□ 1
MDC1-206ENST00000489540 KIF1BPQ96EK5 621 aa21.31■■□□□ 1
MDC1-206ENST00000489540 DBNDD2Q9BQY9 259 aa21.31■■□□□ 1
MDC1-206ENST00000489540 MKRN1Q9UHC7 482 aaKnown RBP21.31■■□□□ 1
MDC1-206ENST00000489540 SPTY2D1Q68D10 685 aaPredicted RBP21.3■■□□□ 1
MDC1-206ENST00000489540 C2orf69Q8N8R5 385 aa21.3■■□□□ 1
MDC1-206ENST00000489540 EAF2Q96CJ1 260 aaPredicted RBP21.3■■□□□ 1
MDC1-206ENST00000489540 ZDHHC15Q96MV8 337 aa21.3■■□□□ 1
MDC1-206ENST00000489540 COL1A1P02452 1464 aaPredicted RBP21.3■■□□□ 1
MDC1-206ENST00000489540 CNTNAP1P78357 1384 aa21.3■■□□□ 1
MDC1-206ENST00000489540 TTC39AQ5SRH9 613 aa21.29■■□□□ 1
MDC1-206ENST00000489540 SAPCD2Q86UD0 394 aa21.29■■□□□ 1
MDC1-206ENST00000489540 SPATA5Q8NB90 893 aa21.29■■□□□ 1
MDC1-206ENST00000489540 ZNF512BQ96KM6 892 aaPredicted RBP21.29■■□□□ 1
MDC1-206ENST00000489540 GBA2Q9HCG7 927 aaPredicted RBP21.29■■□□□ 1
MDC1-206ENST00000489540 HMG20BQ9P0W2 317 aa21.29■■□□□ 1
MDC1-206ENST00000489540 CLRN2A0PK11 232 aa21.29■■□□□ 1
MDC1-206ENST00000489540 PRDX5P30044 214 aa21.29■■□□□ 1
MDC1-206ENST00000489540 SPDYE2Q495Y8 402 aa21.29■■□□□ 1
MDC1-206ENST00000489540 CLASRPQ8N2M8 674 aaKnown RBP21.29■■□□□ 1
MDC1-206ENST00000489540 HHIPL1Q96JK4 782 aa21.29■■□□□ 1
MDC1-206ENST00000489540 CCDC8Q9H0W5 538 aaPredicted RBP21.29■■□□□ 1
MDC1-206ENST00000489540 DEFB129Q9H1M3 183 aa21.29■■□□□ 1
MDC1-206ENST00000489540 TDRD3Q9H7E2 651 aaKnown RBP21.29■■□□□ 1
MDC1-206ENST00000489540 ZNF70Q9UC06 446 aaPredicted RBP21.29■■□□□ 1
MDC1-206ENST00000489540 ABCF2Q9UG63 623 aa21.29■■□□□ 1
MDC1-206ENST00000489540 SCAF8Q9UPN6 1271 aaKnown RBP21.29■■□□□ 1
MDC1-206ENST00000489540 PPP2R3BQ9Y5P8 575 aa21.29■■□□□ 1
MDC1-206ENST00000489540 NF2P35240 595 aa21.28■■□□□ 1
MDC1-206ENST00000489540 TNFAIP1Q13829 316 aa21.28■■□□□ 1
MDC1-206ENST00000489540 AACSQ86V21 672 aa21.28■■□□□ 1
MDC1-206ENST00000489540 JMYQ8N9B5 988 aa21.28■■□□□ 1
MDC1-206ENST00000489540 VEZTQ9HBM0 779 aa21.28■■□□□ 1
MDC1-206ENST00000489540 DBNLQ9UJU6 430 aaKnown RBP21.28■■□□□ 1
MDC1-206ENST00000489540 FKBP1BP68106 108 aa21.27■■□□□ 1
MDC1-206ENST00000489540 APOBEC3HQ6NTF7 200 aaKnown RBP21.27■■□□□ 1
MDC1-206ENST00000489540 SLF2Q8IX21 1173 aa21.27■■□□□ 1
MDC1-206ENST00000489540 CRBNQ96SW2 442 aa21.27■■□□□ 1
MDC1-206ENST00000489540 IL1RAPL2Q9NP60 686 aa21.27■■□□□ 1
MDC1-206ENST00000489540 APBB1O00213 710 aa21.26■□□□□ 0.99
MDC1-206ENST00000489540 ECE1P42892 770 aa21.26■□□□□ 0.99
MDC1-206ENST00000489540 MCAMP43121 646 aa21.26■□□□□ 0.99
MDC1-206ENST00000489540 PRAMEF18Q5VWM3 479 aa21.26■□□□□ 0.99
MDC1-206ENST00000489540 ERICH6Q7L0X2 663 aa21.26■□□□□ 0.99
MDC1-206ENST00000489540 VEGFBP49765 207 aa21.25■□□□□ 0.99
MDC1-206ENST00000489540 AAMPQ13685 434 aa21.25■□□□□ 0.99
MDC1-206ENST00000489540 DZIP1Q86YF9 867 aaKnown RBP21.25■□□□□ 0.99
MDC1-206ENST00000489540 TLR7Q9NYK1 1049 aaKnown RBP21.25■□□□□ 0.99
MDC1-206ENST00000489540 AOX1Q06278 1338 aa21.25■□□□□ 0.99
MDC1-206ENST00000489540 TNNI2P48788 182 aa21.24■□□□□ 0.99
MDC1-206ENST00000489540 HUNKP57058 714 aa21.24■□□□□ 0.99
MDC1-206ENST00000489540 DIXDC1Q155Q3 683 aa21.24■□□□□ 0.99
MDC1-206ENST00000489540 SUPT20HL1Q3ZLR7 823 aa21.24■□□□□ 0.99
MDC1-206ENST00000489540 DCTPP1Q9H773 170 aa21.24■□□□□ 0.99
MDC1-206ENST00000489540 TMOD2Q9NZR1 351 aa21.24■□□□□ 0.99
MDC1-206ENST00000489540 PCDHB15Q9Y5E8 787 aa21.24■□□□□ 0.99
MDC1-206ENST00000489540 ARAP2Q8WZ64 1704 aa21.24■□□□□ 0.99
MDC1-206ENST00000489540 IFIT2P09913 472 aaKnown RBP21.23■□□□□ 0.99
MDC1-206ENST00000489540 RASA3Q14644 834 aa21.23■□□□□ 0.99
MDC1-206ENST00000489540 FKBP1CQ5VVH2 108 aa21.23■□□□□ 0.99
MDC1-206ENST00000489540 PI16Q6UXB8 463 aa21.23■□□□□ 0.99
MDC1-206ENST00000489540 PAXIP1Q6ZW49 1069 aaPredicted RBP21.23■□□□□ 0.99
MDC1-206ENST00000489540 FAM163AQ96GL9 167 aaPredicted RBP21.23■□□□□ 0.99
MDC1-206ENST00000489540 LRRCC1Q9C099 1032 aa21.23■□□□□ 0.99
MDC1-206ENST00000489540 DAGLAQ9Y4D2 1042 aa21.23■□□□□ 0.99
MDC1-206ENST00000489540 CEP350Q5VT06 3117 aa21.23■□□□□ 0.99
MDC1-206ENST00000489540 IGSF3O75054 1194 aa21.22■□□□□ 0.99
MDC1-206ENST00000489540 TBC1D9Q6ZT07 1266 aa21.22■□□□□ 0.99
MDC1-206ENST00000489540 CAPNS2Q96L46 248 aa21.22■□□□□ 0.99
MDC1-206ENST00000489540 SNRKQ9NRH2 765 aa21.22■□□□□ 0.99
MDC1-206ENST00000489540 LRP2BPQ9P2M1 347 aa21.22■□□□□ 0.99
MDC1-206ENST00000489540 SUPT16HQ9Y5B9 1047 aaKnown RBP21.22■□□□□ 0.99
MDC1-206ENST00000489540 WDR33Q9C0J8 1336 aaKnown RBP21.22■□□□□ 0.99
MDC1-206ENST00000489540 TCP10L2B9ZVM9 353 aa21.21■□□□□ 0.99
MDC1-206ENST00000489540 GSTO1P78417 241 aa21.21■□□□□ 0.99
MDC1-206ENST00000489540 RAI14Q9P0K7 980 aa21.21■□□□□ 0.99
MDC1-206ENST00000489540 POLR2AP24928 1970 aaKnown RBP21.21■□□□□ 0.99
MDC1-206ENST00000489540 LDHCP07864 332 aa21.21■□□□□ 0.99
MDC1-206ENST00000489540 MECOMQ03112 1051 aa21.21■□□□□ 0.99
MDC1-206ENST00000489540 TTLL12Q14166 644 aaPredicted RBP21.21■□□□□ 0.99
MDC1-206ENST00000489540 CYP4F22Q6NT55 531 aa21.21■□□□□ 0.99
MDC1-206ENST00000489540 RGMBQ6NW40 437 aa21.21■□□□□ 0.99
MDC1-206ENST00000489540 ARMC9Q7Z3E5 817 aa21.21■□□□□ 0.99
MDC1-206ENST00000489540 TRPM7Q96QT4 1865 aa21.2■□□□□ 0.98
MDC1-206ENST00000489540 GAKO14976 1311 aa21.2■□□□□ 0.98
MDC1-206ENST00000489540 ZAP70P43403 619 aa21.2■□□□□ 0.98
MDC1-206ENST00000489540 CDC42EP5Q6NZY7 148 aa21.2■□□□□ 0.98
MDC1-206ENST00000489540 FAM83AQ86UY5 434 aa21.2■□□□□ 0.98
MDC1-206ENST00000489540 NSUN4Q96CB9 384 aaKnown RBP21.2■□□□□ 0.98
MDC1-206ENST00000489540 PPP1R12BO60237 982 aaPredicted RBP21.19■□□□□ 0.98
MDC1-206ENST00000489540 CYP2E1P05181 493 aaPredicted RBP21.19■□□□□ 0.98
MDC1-206ENST00000489540 CCDC102AQ96A19 550 aa21.19■□□□□ 0.98
MDC1-206ENST00000489540 USP40Q9NVE5 1235 aa21.19■□□□□ 0.98
MDC1-206ENST00000489540 MAP2K2P36507 400 aa21.18■□□□□ 0.98
MDC1-206ENST00000489540 ZNF157P51786 506 aaPredicted RBP21.18■□□□□ 0.98
MDC1-206ENST00000489540 CACNB3P54284 484 aa21.18■□□□□ 0.98
MDC1-206ENST00000489540 GRM1Q13255 1194 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms