RNA–Protein interactions for RNA: ENST00000489452.1

LINC00173-204, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 543 nt, Biotype lincRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-204ENST00000489452 CDCA7LQ96GN5 454 aa16.8■□□□□ 0.28
LINC00173-204ENST00000489452 TMEM39BQ9GZU3 492 aa16.8■□□□□ 0.28
LINC00173-204ENST00000489452 ELP3Q9H9T3 547 aa16.8■□□□□ 0.28
LINC00173-204ENST00000489452 PTPRCP08575 1304 aa16.79■□□□□ 0.28
LINC00173-204ENST00000489452 ZBTB48P10074 688 aaPredicted RBP16.79■□□□□ 0.28
LINC00173-204ENST00000489452 CACNB3P54284 484 aa16.79■□□□□ 0.28
LINC00173-204ENST00000489452 SLFN5Q08AF3 891 aa16.79■□□□□ 0.28
LINC00173-204ENST00000489452 TNFAIP1Q13829 316 aa16.79■□□□□ 0.28
LINC00173-204ENST00000489452 ANKRD13AQ8IZ07 590 aa16.79■□□□□ 0.28
LINC00173-204ENST00000489452 A0A1B0GUL6 1792 aa16.79■□□□□ 0.28
LINC00173-204ENST00000489452 NOM1Q5C9Z4 860 aaKnown RBP16.78■□□□□ 0.28
LINC00173-204ENST00000489452 FBXO46Q6PJ61 603 aaPredicted RBP16.78■□□□□ 0.28
LINC00173-204ENST00000489452 CFHR5Q9BXR6 569 aa16.78■□□□□ 0.28
LINC00173-204ENST00000489452 UNCXA6NJT0 531 aa16.77■□□□□ 0.28
LINC00173-204ENST00000489452 TNNI2P48788 182 aa16.77■□□□□ 0.28
LINC00173-204ENST00000489452 VGLL2Q8N8G2 317 aa16.77■□□□□ 0.28
LINC00173-204ENST00000489452 CNKSR2Q8WXI2 1034 aa16.77■□□□□ 0.28
LINC00173-204ENST00000489452 OPTNQ96CV9 577 aa16.77■□□□□ 0.28
LINC00173-204ENST00000489452 TEPSINQ96N21 525 aa16.77■□□□□ 0.28
LINC00173-204ENST00000489452 PTPN18Q99952 460 aa16.77■□□□□ 0.28
LINC00173-204ENST00000489452 TRIM17Q9Y577 477 aa16.77■□□□□ 0.28
LINC00173-204ENST00000489452 IFIT1P09914 478 aaKnown RBP16.76■□□□□ 0.27
LINC00173-204ENST00000489452 OTUD7BQ6GQQ9 843 aa16.76■□□□□ 0.27
LINC00173-204ENST00000489452 TBC1D22AQ8WUA7 517 aa16.76■□□□□ 0.27
LINC00173-204ENST00000489452 TEKT1Q969V4 418 aa16.76■□□□□ 0.27
LINC00173-204ENST00000489452 SMC4Q9NTJ3 1288 aa16.76■□□□□ 0.27
LINC00173-204ENST00000489452 MAP3K9P80192 1104 aa16.75■□□□□ 0.27
LINC00173-204ENST00000489452 CRHR2Q13324 411 aa16.75■□□□□ 0.27
LINC00173-204ENST00000489452 PUM3Q15397 648 aaKnown RBP16.75■□□□□ 0.27
LINC00173-204ENST00000489452 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.75■□□□□ 0.27
LINC00173-204ENST00000489452 EYA2O00167 538 aa16.74■□□□□ 0.27
LINC00173-204ENST00000489452 HDLBPQ00341 1268 aaKnown RBP16.74■□□□□ 0.27
LINC00173-204ENST00000489452 OTOP1Q7RTM1 612 aa16.74■□□□□ 0.27
LINC00173-204ENST00000489452 CD99L2Q8TCZ2 262 aa16.74■□□□□ 0.27
LINC00173-204ENST00000489452 SIL1Q9H173 461 aa16.74■□□□□ 0.27
LINC00173-204ENST00000489452 CENPFP49454 3210 aa16.73■□□□□ 0.27
LINC00173-204ENST00000489452 FGFR2P21802 821 aa16.73■□□□□ 0.27
LINC00173-204ENST00000489452 RFX5P48382 616 aaPredicted RBP16.73■□□□□ 0.27
LINC00173-204ENST00000489452 VGLL4Q14135 290 aa16.73■□□□□ 0.27
LINC00173-204ENST00000489452 ALDH1L2Q3SY69 923 aa16.73■□□□□ 0.27
LINC00173-204ENST00000489452 TMOD2Q9NZR1 351 aa16.73■□□□□ 0.27
LINC00173-204ENST00000489452 NOB1Q9ULX3 412 aaKnown RBP16.73■□□□□ 0.27
LINC00173-204ENST00000489452 CSADQ9Y600 493 aa16.73■□□□□ 0.27
LINC00173-204ENST00000489452 HTTP42858 3142 aa16.73■□□□□ 0.27
LINC00173-204ENST00000489452 ECM29Q5VYK3 1845 aa16.73■□□□□ 0.27
LINC00173-204ENST00000489452 SLC5A1P13866 664 aa16.72■□□□□ 0.27
LINC00173-204ENST00000489452 APOBEC3HQ6NTF7 200 aaKnown RBP16.72■□□□□ 0.27
LINC00173-204ENST00000489452 OTUD5Q96G74 571 aa16.72■□□□□ 0.27
LINC00173-204ENST00000489452 MS4A4AQ96JQ5 239 aa16.72■□□□□ 0.27
LINC00173-204ENST00000489452 ZDHHC15Q96MV8 337 aa16.72■□□□□ 0.27
LINC00173-204ENST00000489452 CCL15-CCL14A0A0B4J2E2 113 aa16.71■□□□□ 0.27
LINC00173-204ENST00000489452 TESPA1A2RU30 521 aaPredicted RBP16.71■□□□□ 0.27
LINC00173-204ENST00000489452 UBTFL1P0CB47 393 aaPredicted RBP16.71■□□□□ 0.27
LINC00173-204ENST00000489452 SP3Q02447 781 aa16.71■□□□□ 0.27
LINC00173-204ENST00000489452 CCL15Q16663 113 aa16.71■□□□□ 0.27
LINC00173-204ENST00000489452 ATG9AQ7Z3C6 839 aa16.71■□□□□ 0.27
LINC00173-204ENST00000489452 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.71■□□□□ 0.27
LINC00173-204ENST00000489452 BRI3BPQ8WY22 251 aa16.71■□□□□ 0.27
LINC00173-204ENST00000489452 LPIN2Q92539 896 aa16.71■□□□□ 0.27
LINC00173-204ENST00000489452 ZKSCAN4Q969J2 545 aaPredicted RBP16.71■□□□□ 0.27
LINC00173-204ENST00000489452 ERO1AQ96HE7 468 aa16.71■□□□□ 0.27
LINC00173-204ENST00000489452 MRIQ9BWK5 157 aa16.71■□□□□ 0.27
LINC00173-204ENST00000489452 EFCC1Q9HA90 598 aa16.71■□□□□ 0.27
LINC00173-204ENST00000489452 GTF2A2P52657 109 aa16.7■□□□□ 0.26
LINC00173-204ENST00000489452 MIGA2Q7L4E1 593 aa16.7■□□□□ 0.26
LINC00173-204ENST00000489452 WDR66Q8TBY9 1149 aa16.7■□□□□ 0.26
LINC00173-204ENST00000489452 CEP126Q9P2H0 1117 aa16.7■□□□□ 0.26
LINC00173-204ENST00000489452 SLC34A2O95436 690 aa16.69■□□□□ 0.26
LINC00173-204ENST00000489452 TAF1CQ15572 869 aaPredicted RBP16.69■□□□□ 0.26
LINC00173-204ENST00000489452 ATP2B3Q16720 1220 aa16.69■□□□□ 0.26
LINC00173-204ENST00000489452 HHIPL2Q6UWX4 724 aa16.69■□□□□ 0.26
LINC00173-204ENST00000489452 WRNIP1Q96S55 665 aa16.69■□□□□ 0.26
LINC00173-204ENST00000489452 PA2G4Q9UQ80 394 aaKnown RBP16.69■□□□□ 0.26
LINC00173-204ENST00000489452 PTPN22Q9Y2R2 807 aa16.69■□□□□ 0.26
LINC00173-204ENST00000489452 SUGT1Q9Y2Z0 365 aa16.69■□□□□ 0.26
LINC00173-204ENST00000489452 LRRFIP2Q9Y608 721 aaKnown RBP16.69■□□□□ 0.26
LINC00173-204ENST00000489452 MAST3O60307 1309 aa16.69■□□□□ 0.26
LINC00173-204ENST00000489452 CAP1Q01518 475 aa16.68■□□□□ 0.26
LINC00173-204ENST00000489452 TCP10Q12799 353 aa16.68■□□□□ 0.26
LINC00173-204ENST00000489452 DIXDC1Q155Q3 683 aa16.68■□□□□ 0.26
LINC00173-204ENST00000489452 FAM83AQ86UY5 434 aa16.68■□□□□ 0.26
LINC00173-204ENST00000489452 TRMT2AQ8IZ69 625 aaKnown RBP16.68■□□□□ 0.26
LINC00173-204ENST00000489452 FAM43AQ8N2R8 423 aa16.68■□□□□ 0.26
LINC00173-204ENST00000489452 ZFYVE28Q9HCC9 887 aa16.68■□□□□ 0.26
LINC00173-204ENST00000489452 SNCAIPQ9Y6H5 919 aa16.68■□□□□ 0.26
LINC00173-204ENST00000489452 FKBP1CQ5VVH2 108 aa16.67■□□□□ 0.26
LINC00173-204ENST00000489452 GNL3LQ9NVN8 582 aaKnown RBP16.67■□□□□ 0.26
LINC00173-204ENST00000489452 MKI67P46013 3256 aaKnown RBP16.67■□□□□ 0.26
LINC00173-204ENST00000489452 KIF16BQ96L93 1317 aa16.67■□□□□ 0.26
LINC00173-204ENST00000489452 POTEFA5A3E0 1075 aa16.66■□□□□ 0.26
LINC00173-204ENST00000489452 SPDYE5A6NIY4 337 aa16.66■□□□□ 0.26
LINC00173-204ENST00000489452 ECM2O94769 699 aaPredicted RBP16.66■□□□□ 0.26
LINC00173-204ENST00000489452 PRDX5P30044 214 aa16.66■□□□□ 0.26
LINC00173-204ENST00000489452 DCAF15Q66K64 600 aa16.66■□□□□ 0.26
LINC00173-204ENST00000489452 CDC42EP5Q6NZY7 148 aa16.66■□□□□ 0.26
LINC00173-204ENST00000489452 ERO1BQ86YB8 467 aa16.66■□□□□ 0.26
LINC00173-204ENST00000489452 HOOK2Q96ED9 719 aa16.66■□□□□ 0.26
LINC00173-204ENST00000489452 API5Q9BZZ5 524 aaKnown RBP16.66■□□□□ 0.26
LINC00173-204ENST00000489452 USP40Q9NVE5 1235 aa16.66■□□□□ 0.26
LINC00173-204ENST00000489452 DAGLAQ9Y4D2 1042 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms