RNA–Protein interactions for RNA: ENST00000489430.1

MRPL55-230, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-230ENST00000489430 PDS5AQ29RF7 1337 aaKnown RBP23.52■■□□□ 1.36
MRPL55-230ENST00000489430 SALL1Q9NSC2 1324 aa23.52■■□□□ 1.36
MRPL55-230ENST00000489430 AOC2O75106 756 aa23.51■■□□□ 1.35
MRPL55-230ENST00000489430 TFCP2Q12800 502 aa23.51■■□□□ 1.35
MRPL55-230ENST00000489430 MVPQ14764 893 aaKnown RBP23.51■■□□□ 1.35
MRPL55-230ENST00000489430 SUPT20HL1Q3ZLR7 823 aa23.51■■□□□ 1.35
MRPL55-230ENST00000489430 PRAMEF18Q5VWM3 479 aa23.51■■□□□ 1.35
MRPL55-230ENST00000489430 REM2Q8IYK8 340 aaPredicted RBP23.51■■□□□ 1.35
MRPL55-230ENST00000489430 ZDHHC15Q96MV8 337 aa23.51■■□□□ 1.35
MRPL55-230ENST00000489430 RCAN3Q9UKA8 241 aa23.51■■□□□ 1.35
MRPL55-230ENST00000489430 PCDHAC2Q9Y5I4 1007 aa23.51■■□□□ 1.35
MRPL55-230ENST00000489430 A0A1B0GUL7 405 aa23.5■■□□□ 1.35
MRPL55-230ENST00000489430 UNCXA6NJT0 531 aa23.5■■□□□ 1.35
MRPL55-230ENST00000489430 SLC10A3P09131 477 aa23.5■■□□□ 1.35
MRPL55-230ENST00000489430 CCDC102BQ68D86 513 aa23.5■■□□□ 1.35
MRPL55-230ENST00000489430 HHIPL2Q6UWX4 724 aa23.5■■□□□ 1.35
MRPL55-230ENST00000489430 ARMC9Q7Z3E5 817 aa23.5■■□□□ 1.35
MRPL55-230ENST00000489430 ARAP2Q8WZ64 1704 aa23.5■■□□□ 1.35
MRPL55-230ENST00000489430 CLRN2A0PK11 232 aa23.49■■□□□ 1.35
MRPL55-230ENST00000489430 PHKA1P46020 1223 aa23.49■■□□□ 1.35
MRPL55-230ENST00000489430 TIMM10P62072 90 aa23.49■■□□□ 1.35
MRPL55-230ENST00000489430 GRIK5Q16478 980 aa23.49■■□□□ 1.35
MRPL55-230ENST00000489430 ZGPATQ8N5A5 531 aaKnown RBP23.49■■□□□ 1.35
MRPL55-230ENST00000489430 CHMP4BQ9H444 224 aaKnown RBP23.49■■□□□ 1.35
MRPL55-230ENST00000489430 VEZTQ9HBM0 779 aa23.49■■□□□ 1.35
MRPL55-230ENST00000489430 ZNF70Q9UC06 446 aaPredicted RBP23.49■■□□□ 1.35
MRPL55-230ENST00000489430 MAP3K11Q16584 847 aa23.48■■□□□ 1.35
MRPL55-230ENST00000489430 COL13A1Q5TAT6 717 aaPredicted RBP23.48■■□□□ 1.35
MRPL55-230ENST00000489430 XAGE2Q96GT9 111 aa23.48■■□□□ 1.35
MRPL55-230ENST00000489430 GPR108Q9NPR9 543 aa23.48■■□□□ 1.35
MRPL55-230ENST00000489430 NOP58Q9Y2X3 529 aaKnown RBP23.48■■□□□ 1.35
MRPL55-230ENST00000489430 PPP1R12BO60237 982 aaPredicted RBP23.47■■□□□ 1.35
MRPL55-230ENST00000489430 TNNI2P48788 182 aa23.47■■□□□ 1.35
MRPL55-230ENST00000489430 TTLL12Q14166 644 aaPredicted RBP23.47■■□□□ 1.35
MRPL55-230ENST00000489430 RASA3Q14644 834 aa23.47■■□□□ 1.35
MRPL55-230ENST00000489430 FKBP1CQ5VVH2 108 aa23.47■■□□□ 1.35
MRPL55-230ENST00000489430 PANK1Q8TE04 598 aa23.47■■□□□ 1.35
MRPL55-230ENST00000489430 TDRD3Q9H7E2 651 aaKnown RBP23.47■■□□□ 1.35
MRPL55-230ENST00000489430 UBE2Q2LH0YL09 131 aa23.46■■□□□ 1.35
MRPL55-230ENST00000489430 ADORA1P30542 326 aa23.46■■□□□ 1.35
MRPL55-230ENST00000489430 LDLRAD1Q5T700 205 aa23.46■■□□□ 1.35
MRPL55-230ENST00000489430 RASAL3Q86YV0 1011 aa23.46■■□□□ 1.35
MRPL55-230ENST00000489430 DDX19BQ9UMR2 479 aa23.46■■□□□ 1.35
MRPL55-230ENST00000489430 AOX1Q06278 1338 aa23.45■■□□□ 1.34
MRPL55-230ENST00000489430 LDHBP07195 334 aaKnown RBP23.45■■□□□ 1.34
MRPL55-230ENST00000489430 APOBEC3HQ6NTF7 200 aaKnown RBP23.45■■□□□ 1.34
MRPL55-230ENST00000489430 HSPA8P11142 646 aaKnown RBP23.44■■□□□ 1.34
MRPL55-230ENST00000489430 RASGRF1Q13972 1273 aa23.44■■□□□ 1.34
MRPL55-230ENST00000489430 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.44■■□□□ 1.34
MRPL55-230ENST00000489430 NEUROD6Q96NK8 337 aa23.44■■□□□ 1.34
MRPL55-230ENST00000489430 C1orf115Q9H7X2 142 aa23.44■■□□□ 1.34
MRPL55-230ENST00000489430 TMOD2Q9NZR1 351 aa23.44■■□□□ 1.34
MRPL55-230ENST00000489430 ECM29Q5VYK3 1845 aa23.43■■□□□ 1.34
MRPL55-230ENST00000489430 SURF6O75683 361 aaKnown RBP23.43■■□□□ 1.34
MRPL55-230ENST00000489430 KIF23Q02241 960 aaPredicted RBP23.43■■□□□ 1.34
MRPL55-230ENST00000489430 IFFO2Q5TF58 517 aa23.43■■□□□ 1.34
MRPL55-230ENST00000489430 CEP85Q6P2H3 762 aa23.43■■□□□ 1.34
MRPL55-230ENST00000489430 MOB2Q70IA6 237 aa23.43■■□□□ 1.34
MRPL55-230ENST00000489430 FAM83AQ86UY5 434 aa23.43■■□□□ 1.34
MRPL55-230ENST00000489430 SAGE1Q9NXZ1 904 aa23.43■■□□□ 1.34
MRPL55-230ENST00000489430 PRDX5P30044 214 aa23.42■■□□□ 1.34
MRPL55-230ENST00000489430 LBX1P52954 281 aa23.42■■□□□ 1.34
MRPL55-230ENST00000489430 OS9Q13438 667 aaPredicted RBP23.42■■□□□ 1.34
MRPL55-230ENST00000489430 PDE3AQ14432 1141 aa23.42■■□□□ 1.34
MRPL55-230ENST00000489430 GORABQ5T7V8 394 aa23.42■■□□□ 1.34
MRPL55-230ENST00000489430 SPTY2D1Q68D10 685 aaPredicted RBP23.42■■□□□ 1.34
MRPL55-230ENST00000489430 ZIC5Q96T25 663 aa23.42■■□□□ 1.34
MRPL55-230ENST00000489430 ANGEL1Q9UNK9 670 aaKnown RBP23.42■■□□□ 1.34
MRPL55-230ENST00000489430 NBPF12Q5TAG4 269 aaPredicted RBP23.41■■□□□ 1.34
MRPL55-230ENST00000489430 SLF2Q8IX21 1173 aa23.41■■□□□ 1.34
MRPL55-230ENST00000489430 HOOK2Q96ED9 719 aa23.41■■□□□ 1.34
MRPL55-230ENST00000489430 TEPSINQ96N21 525 aa23.41■■□□□ 1.34
MRPL55-230ENST00000489430 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.41■■□□□ 1.34
MRPL55-230ENST00000489430 UQCRFS1P1P0C7P4 283 aa23.4■■□□□ 1.34
MRPL55-230ENST00000489430 ARID4AP29374 1257 aaPredicted RBP23.4■■□□□ 1.34
MRPL55-230ENST00000489430 IREB2P48200 963 aaKnown RBP23.4■■□□□ 1.34
MRPL55-230ENST00000489430 TNNI3KQ59H18 835 aa23.4■■□□□ 1.34
MRPL55-230ENST00000489430 RPAP2Q8IXW5 612 aaPredicted RBP23.4■■□□□ 1.34
MRPL55-230ENST00000489430 FAM163AQ96GL9 167 aaPredicted RBP23.4■■□□□ 1.34
MRPL55-230ENST00000489430 ZBTB40Q9NUA8 1239 aa23.4■■□□□ 1.34
MRPL55-230ENST00000489430 FPGT-TNNI3KV9GXZ4 949 aa23.4■■□□□ 1.34
MRPL55-230ENST00000489430 SSC5DA1L4H1 1573 aa23.4■■□□□ 1.34
MRPL55-230ENST00000489430 TCP10L2B9ZVM9 353 aa23.39■■□□□ 1.33
MRPL55-230ENST00000489430 IGSF3O75054 1194 aa23.39■■□□□ 1.33
MRPL55-230ENST00000489430 HSP90AB4PQ58FF6 505 aa23.39■■□□□ 1.33
MRPL55-230ENST00000489430 ERC1Q8IUD2 1116 aa23.39■■□□□ 1.33
MRPL55-230ENST00000489430 CSRNP1Q96S65 589 aa23.39■■□□□ 1.33
MRPL55-230ENST00000489430 DAGLAQ9Y4D2 1042 aa23.39■■□□□ 1.33
MRPL55-230ENST00000489430 PRKG1Q13976 671 aa23.38■■□□□ 1.33
MRPL55-230ENST00000489430 TNS4Q8IZW8 715 aa23.38■■□□□ 1.33
MRPL55-230ENST00000489430 SPATA5Q8NB90 893 aa23.38■■□□□ 1.33
MRPL55-230ENST00000489430 ZNF512BQ96KM6 892 aaPredicted RBP23.38■■□□□ 1.33
MRPL55-230ENST00000489430 COG6Q9Y2V7 657 aa23.38■■□□□ 1.33
MRPL55-230ENST00000489430 RPAP1Q9BWH6 1393 aaPredicted RBP23.38■■□□□ 1.33
MRPL55-230ENST00000489430 HMMRO75330 724 aa23.37■■□□□ 1.33
MRPL55-230ENST00000489430 USP2O75604 605 aaPredicted RBP23.37■■□□□ 1.33
MRPL55-230ENST00000489430 DIXDC1Q155Q3 683 aa23.37■■□□□ 1.33
MRPL55-230ENST00000489430 CCDC158Q5M9N0 1113 aa23.37■■□□□ 1.33
MRPL55-230ENST00000489430 ANKRD13AQ8IZ07 590 aa23.37■■□□□ 1.33
MRPL55-230ENST00000489430 TMEM39BQ9GZU3 492 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms