RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 ERO1AQ96HE7 468 aa11.8□□□□□ -0.52
SNX17-207ENST00000489402 ZNF70Q9UC06 446 aaPredicted RBP11.8□□□□□ -0.52
SNX17-207ENST00000489402 TRIM17Q9Y577 477 aa11.8□□□□□ -0.52
SNX17-207ENST00000489402 IGF2BP3O00425 579 aaKnown RBP eCLIP11.79□□□□□ -0.52
SNX17-207ENST00000489402 FRAT2O75474 233 aaPredicted RBP11.79□□□□□ -0.52
SNX17-207ENST00000489402 USP2O75604 605 aaPredicted RBP11.79□□□□□ -0.52
SNX17-207ENST00000489402 ZEB1P37275 1124 aaPredicted RBP11.79□□□□□ -0.52
SNX17-207ENST00000489402 DZIP1LQ8IYY4 767 aaKnown RBP11.79□□□□□ -0.52
SNX17-207ENST00000489402 FAM84BQ96KN1 310 aaPredicted RBP11.79□□□□□ -0.52
SNX17-207ENST00000489402 TDRD3Q9H7E2 651 aaKnown RBP11.79□□□□□ -0.52
SNX17-207ENST00000489402 ZNF316A6NFI3 1004 aaPredicted RBP11.78□□□□□ -0.52
SNX17-207ENST00000489402 CRKP46108 304 aa11.78□□□□□ -0.52
SNX17-207ENST00000489402 LRRC24Q50LG9 513 aa11.78□□□□□ -0.52
SNX17-207ENST00000489402 CAVIN4Q5BKX8 364 aa11.78□□□□□ -0.52
SNX17-207ENST00000489402 METTL24Q5JXM2 366 aa11.78□□□□□ -0.52
SNX17-207ENST00000489402 OTOP1Q7RTM1 612 aa11.78□□□□□ -0.52
SNX17-207ENST00000489402 KLHDC4Q8TBB5 520 aa11.78□□□□□ -0.52
SNX17-207ENST00000489402 TBC1D22AQ8WUA7 517 aa11.78□□□□□ -0.52
SNX17-207ENST00000489402 BICC1Q9H694 974 aaKnown RBP11.78□□□□□ -0.52
SNX17-207ENST00000489402 IQSEC3Q9UPP2 1182 aaPredicted RBP11.78□□□□□ -0.52
SNX17-207ENST00000489402 RIPOR2Q9Y4F9 1068 aa11.78□□□□□ -0.52
SNX17-207ENST00000489402 PDE4DIPQ5VU43 2346 aa11.78□□□□□ -0.52
SNX17-207ENST00000489402 UTYO14607 1347 aa11.78□□□□□ -0.52
SNX17-207ENST00000489402 TCP10L2B9ZVM9 353 aa11.77□□□□□ -0.53
SNX17-207ENST00000489402 CHAF1AQ13111 956 aaPredicted RBP11.77□□□□□ -0.53
SNX17-207ENST00000489402 CRHR2Q13324 411 aa11.77□□□□□ -0.53
SNX17-207ENST00000489402 ANKRD44Q8N8A2 993 aa11.77□□□□□ -0.53
SNX17-207ENST00000489402 OPTNQ96CV9 577 aa11.77□□□□□ -0.53
SNX17-207ENST00000489402 ELP3Q9H9T3 547 aa11.77□□□□□ -0.53
SNX17-207ENST00000489402 TMOD2Q9NZR1 351 aa11.77□□□□□ -0.53
SNX17-207ENST00000489402 CSADQ9Y600 493 aa11.77□□□□□ -0.53
SNX17-207ENST00000489402 PTPRCP08575 1304 aa11.77□□□□□ -0.53
SNX17-207ENST00000489402 ZNF521Q96K83 1311 aa11.77□□□□□ -0.53
SNX17-207ENST00000489402 HDLBPQ00341 1268 aaKnown RBP11.76□□□□□ -0.53
SNX17-207ENST00000489402 RABL6Q3YEC7 729 aaPredicted RBP11.76□□□□□ -0.53
SNX17-207ENST00000489402 INTS3Q68E01 1043 aaKnown RBP11.76□□□□□ -0.53
SNX17-207ENST00000489402 FBXO33Q7Z6M2 555 aa11.76□□□□□ -0.53
SNX17-207ENST00000489402 MRPL50Q8N5N7 158 aaKnown RBP11.76□□□□□ -0.53
SNX17-207ENST00000489402 CD99L2Q8TCZ2 262 aa11.76□□□□□ -0.53
SNX17-207ENST00000489402 TEKT1Q969V4 418 aa11.76□□□□□ -0.53
SNX17-207ENST00000489402 PTPN18Q99952 460 aa11.76□□□□□ -0.53
SNX17-207ENST00000489402 TMEM39BQ9GZU3 492 aa11.76□□□□□ -0.53
SNX17-207ENST00000489402 MAST3O60307 1309 aa11.76□□□□□ -0.53
SNX17-207ENST00000489402 MYH13Q9UKX3 1938 aa11.76□□□□□ -0.53
SNX17-207ENST00000489402 TESPA1A2RU30 521 aaPredicted RBP11.75□□□□□ -0.53
SNX17-207ENST00000489402 WDHD1O75717 1129 aaPredicted RBP11.75□□□□□ -0.53
SNX17-207ENST00000489402 PDE8BO95263 885 aa11.75□□□□□ -0.53
SNX17-207ENST00000489402 GTF2A2P52657 109 aa11.75□□□□□ -0.53
SNX17-207ENST00000489402 MAP3K9P80192 1104 aa11.75□□□□□ -0.53
SNX17-207ENST00000489402 SP3Q02447 781 aa11.75□□□□□ -0.53
SNX17-207ENST00000489402 ARHGEF6Q15052 776 aa11.75□□□□□ -0.53
SNX17-207ENST00000489402 HOOK2Q96ED9 719 aa11.75□□□□□ -0.53
SNX17-207ENST00000489402 TEPSINQ96N21 525 aa11.75□□□□□ -0.53
SNX17-207ENST00000489402 EFCC1Q9HA90 598 aa11.75□□□□□ -0.53
SNX17-207ENST00000489402 PTPN22Q9Y2R2 807 aa11.75□□□□□ -0.53
SNX17-207ENST00000489402 RBBP6Q7Z6E9 1792 aaKnown RBP11.74□□□□□ -0.53
SNX17-207ENST00000489402 CCL15-CCL14A0A0B4J2E2 113 aa11.74□□□□□ -0.53
SNX17-207ENST00000489402 IFIT1P09914 478 aaKnown RBP11.74□□□□□ -0.53
SNX17-207ENST00000489402 CACNB3P54284 484 aa11.74□□□□□ -0.53
SNX17-207ENST00000489402 VGLL4Q14135 290 aa11.74□□□□□ -0.53
SNX17-207ENST00000489402 TAF1CQ15572 869 aaPredicted RBP11.74□□□□□ -0.53
SNX17-207ENST00000489402 CCL15Q16663 113 aa11.74□□□□□ -0.53
SNX17-207ENST00000489402 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.74□□□□□ -0.53
SNX17-207ENST00000489402 CDCA7LQ96GN5 454 aa11.74□□□□□ -0.53
SNX17-207ENST00000489402 ZFYVE28Q9HCC9 887 aa11.74□□□□□ -0.53
SNX17-207ENST00000489402 SUGT1Q9Y2Z0 365 aa11.74□□□□□ -0.53
SNX17-207ENST00000489402 BCAMP50895 628 aa11.73□□□□□ -0.53
SNX17-207ENST00000489402 PUM3Q15397 648 aaKnown RBP11.73□□□□□ -0.53
SNX17-207ENST00000489402 VGLL2Q8N8G2 317 aa11.73□□□□□ -0.53
SNX17-207ENST00000489402 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.73□□□□□ -0.53
SNX17-207ENST00000489402 OTUD5Q96G74 571 aa11.73□□□□□ -0.53
SNX17-207ENST00000489402 MS4A4AQ96JQ5 239 aa11.73□□□□□ -0.53
SNX17-207ENST00000489402 KIF16BQ96L93 1317 aa11.73□□□□□ -0.53
SNX17-207ENST00000489402 ZDHHC15Q96MV8 337 aa11.73□□□□□ -0.53
SNX17-207ENST00000489402 RNF39Q9H2S5 420 aa11.73□□□□□ -0.53
SNX17-207ENST00000489402 ZSWIM8A7E2V4 1837 aa11.72□□□□□ -0.53
SNX17-207ENST00000489402 E9PSI1 815 aa11.72□□□□□ -0.53
SNX17-207ENST00000489402 SLC5A1P13866 664 aa11.72□□□□□ -0.53
SNX17-207ENST00000489402 FKBP1CQ5VVH2 108 aa11.72□□□□□ -0.53
SNX17-207ENST00000489402 DCAF15Q66K64 600 aa11.72□□□□□ -0.53
SNX17-207ENST00000489402 FAM83AQ86UY5 434 aa11.72□□□□□ -0.53
SNX17-207ENST00000489402 BRI3BPQ8WY22 251 aa11.72□□□□□ -0.53
SNX17-207ENST00000489402 SSH1Q8WYL5 1049 aa11.72□□□□□ -0.53
SNX17-207ENST00000489402 GCC1Q96CN9 775 aa11.72□□□□□ -0.53
SNX17-207ENST00000489402 WRNIP1Q96S55 665 aa11.72□□□□□ -0.53
SNX17-207ENST00000489402 MRIQ9BWK5 157 aa11.72□□□□□ -0.53
SNX17-207ENST00000489402 RPAP1Q9BWH6 1393 aaPredicted RBP11.71□□□□□ -0.53
SNX17-207ENST00000489402 POTEFA5A3E0 1075 aa11.71□□□□□ -0.53
SNX17-207ENST00000489402 SPDYE5A6NIY4 337 aa11.71□□□□□ -0.53
SNX17-207ENST00000489402 CETPP11597 493 aa11.71□□□□□ -0.53
SNX17-207ENST00000489402 HHIPL2Q6UWX4 724 aa11.71□□□□□ -0.53
SNX17-207ENST00000489402 ERO1BQ86YB8 467 aa11.71□□□□□ -0.53
SNX17-207ENST00000489402 WDR66Q8TBY9 1149 aa11.71□□□□□ -0.53
SNX17-207ENST00000489402 ARMC5Q96C12 935 aa11.71□□□□□ -0.53
SNX17-207ENST00000489402 USP44Q9H0E7 712 aa11.71□□□□□ -0.53
SNX17-207ENST00000489402 EYA2O00167 538 aa11.7□□□□□ -0.54
SNX17-207ENST00000489402 FGFR2P21802 821 aa11.7□□□□□ -0.54
SNX17-207ENST00000489402 RFX5P48382 616 aaPredicted RBP11.7□□□□□ -0.54
SNX17-207ENST00000489402 SNAPC2Q13487 334 aa11.7□□□□□ -0.54
SNX17-207ENST00000489402 KIF22Q14807 665 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms