RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 PCDHAC2Q9Y5I4 1007 aa12□□□□□ -0.49
SSBP1-212ENST00000489378 OTOFQ9HC10 1997 aa11.99□□□□□ -0.49
SSBP1-212ENST00000489378 UNCXA6NJT0 531 aa11.99□□□□□ -0.49
SSBP1-212ENST00000489378 USP2O75604 605 aaPredicted RBP11.99□□□□□ -0.49
SSBP1-212ENST00000489378 TRIM28Q13263 835 aaKnown RBP11.99□□□□□ -0.49
SSBP1-212ENST00000489378 TAF1CQ15572 869 aaPredicted RBP11.99□□□□□ -0.49
SSBP1-212ENST00000489378 CCDC152Q4G0S7 254 aa11.99□□□□□ -0.49
SSBP1-212ENST00000489378 NBPF12Q5TAG4 269 aaPredicted RBP11.99□□□□□ -0.49
SSBP1-212ENST00000489378 TXNRD3Q86VQ6 643 aa11.99□□□□□ -0.49
SSBP1-212ENST00000489378 BRI3BPQ8WY22 251 aa11.99□□□□□ -0.49
SSBP1-212ENST00000489378 JARID2Q92833 1246 aaPredicted RBP11.99□□□□□ -0.49
SSBP1-212ENST00000489378 COL25A1Q9BXS0 654 aaPredicted RBP11.99□□□□□ -0.49
SSBP1-212ENST00000489378 ZNF316A6NFI3 1004 aaPredicted RBP11.98□□□□□ -0.49
SSBP1-212ENST00000489378 ANKRD18AQ8IVF6 992 aa11.98□□□□□ -0.49
SSBP1-212ENST00000489378 ZBTB38Q8NAP3 1195 aaPredicted RBP11.98□□□□□ -0.49
SSBP1-212ENST00000489378 OPTNQ96CV9 577 aa11.98□□□□□ -0.49
SSBP1-212ENST00000489378 COA1Q9GZY4 146 aa11.98□□□□□ -0.49
SSBP1-212ENST00000489378 ELP3Q9H9T3 547 aa11.98□□□□□ -0.49
SSBP1-212ENST00000489378 ZFYVE28Q9HCC9 887 aa11.98□□□□□ -0.49
SSBP1-212ENST00000489378 AOX1Q06278 1338 aa11.98□□□□□ -0.49
SSBP1-212ENST00000489378 CLSPNQ9HAW4 1339 aa11.98□□□□□ -0.49
SSBP1-212ENST00000489378 A0A1W2PPC1 479 aa11.97□□□□□ -0.49
SSBP1-212ENST00000489378 CLRN2A0PK11 232 aa11.97□□□□□ -0.49
SSBP1-212ENST00000489378 IREB2P48200 963 aaKnown RBP11.97□□□□□ -0.49
SSBP1-212ENST00000489378 MMP14P50281 582 aa11.97□□□□□ -0.49
SSBP1-212ENST00000489378 DLGAP5Q15398 846 aa11.97□□□□□ -0.49
SSBP1-212ENST00000489378 SUPT20HL1Q3ZLR7 823 aa11.97□□□□□ -0.49
SSBP1-212ENST00000489378 TTLL5Q6EMB2 1281 aa11.97□□□□□ -0.49
SSBP1-212ENST00000489378 ANKRD13AQ8IZ07 590 aa11.97□□□□□ -0.49
SSBP1-212ENST00000489378 FAM43AQ8N2R8 423 aa11.97□□□□□ -0.49
SSBP1-212ENST00000489378 HTATIP2Q9BUP3 242 aa11.97□□□□□ -0.49
SSBP1-212ENST00000489378 PPP2R3BQ9Y5P8 575 aa11.97□□□□□ -0.49
SSBP1-212ENST00000489378 NR2E3Q9Y5X4 410 aa11.97□□□□□ -0.49
SSBP1-212ENST00000489378 SPEF2Q9C093 1822 aa11.97□□□□□ -0.49
SSBP1-212ENST00000489378 ECM29Q5VYK3 1845 aa11.96□□□□□ -0.49
SSBP1-212ENST00000489378 CCL15-CCL14A0A0B4J2E2 113 aa11.96□□□□□ -0.49
SSBP1-212ENST00000489378 PDE8AO60658 829 aa11.96□□□□□ -0.49
SSBP1-212ENST00000489378 KLRK1P26718 216 aa11.96□□□□□ -0.49
SSBP1-212ENST00000489378 LACTBP83111 547 aaPredicted RBP11.96□□□□□ -0.49
SSBP1-212ENST00000489378 CCL15Q16663 113 aa11.96□□□□□ -0.49
SSBP1-212ENST00000489378 BABAM1Q9NWV8 329 aa11.96□□□□□ -0.49
SSBP1-212ENST00000489378 STAP2Q9UGK3 403 aa11.96□□□□□ -0.49
SSBP1-212ENST00000489378 MINPP1Q9UNW1 487 aa11.96□□□□□ -0.49
SSBP1-212ENST00000489378 ZNF804BA4D1E1 1349 aa11.96□□□□□ -0.5
SSBP1-212ENST00000489378 GJA8P48165 433 aa11.95□□□□□ -0.5
SSBP1-212ENST00000489378 CCT4P50991 539 aaKnown RBP11.95□□□□□ -0.5
SSBP1-212ENST00000489378 GTF2IP78347 998 aa11.95□□□□□ -0.5
SSBP1-212ENST00000489378 HDGFL1Q5TGJ6 251 aa11.95□□□□□ -0.5
SSBP1-212ENST00000489378 Q7L0L9 218 aa11.95□□□□□ -0.5
SSBP1-212ENST00000489378 CERS5Q8N5B7 392 aa11.95□□□□□ -0.5
SSBP1-212ENST00000489378 VCANP13611 3396 aa11.95□□□□□ -0.5
SSBP1-212ENST00000489378 MAPK8IP3Q9UPT6 1336 aa11.95□□□□□ -0.5
SSBP1-212ENST00000489378 PCCAP05165 728 aaPredicted RBP11.94□□□□□ -0.5
SSBP1-212ENST00000489378 CTGFP29279 349 aa11.94□□□□□ -0.5
SSBP1-212ENST00000489378 DEFB123Q8N688 67 aa11.94□□□□□ -0.5
SSBP1-212ENST00000489378 NKX2-3Q8TAU0 364 aa11.94□□□□□ -0.5
SSBP1-212ENST00000489378 PCGF6Q9BYE7 350 aa11.94□□□□□ -0.5
SSBP1-212ENST00000489378 VEZTQ9HBM0 779 aa11.94□□□□□ -0.5
SSBP1-212ENST00000489378 STXBP5LQ9Y2K9 1186 aa11.94□□□□□ -0.5
SSBP1-212ENST00000489378 TLR2O60603 784 aa11.94□□□□□ -0.5
SSBP1-212ENST00000489378 GJB1P08034 283 aa11.94□□□□□ -0.5
SSBP1-212ENST00000489378 CCL5P13501 91 aa11.94□□□□□ -0.5
SSBP1-212ENST00000489378 HSP90B1P14625 803 aaKnown RBP11.94□□□□□ -0.5
SSBP1-212ENST00000489378 RIPK4P57078 832 aa11.94□□□□□ -0.5
SSBP1-212ENST00000489378 RASA3Q14644 834 aa11.94□□□□□ -0.5
SSBP1-212ENST00000489378 KIF22Q14807 665 aa11.94□□□□□ -0.5
SSBP1-212ENST00000489378 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.94□□□□□ -0.5
SSBP1-212ENST00000489378 MTMR14Q8NCE2 650 aa11.94□□□□□ -0.5
SSBP1-212ENST00000489378 PRMT6Q96LA8 375 aaPredicted RBP11.94□□□□□ -0.5
SSBP1-212ENST00000489378 BSDC1Q9NW68 430 aaPredicted RBP11.94□□□□□ -0.5
SSBP1-212ENST00000489378 DBF4Q9UBU7 674 aaPredicted RBP11.94□□□□□ -0.5
SSBP1-212ENST00000489378 F8W031 263 aaPredicted RBP11.93□□□□□ -0.5
SSBP1-212ENST00000489378 FARP2O94887 1054 aaPredicted RBP11.93□□□□□ -0.5
SSBP1-212ENST00000489378 GTF2A2P52657 109 aa11.93□□□□□ -0.5
SSBP1-212ENST00000489378 PRMT2P55345 433 aa11.93□□□□□ -0.5
SSBP1-212ENST00000489378 CFAP100Q494V2 611 aa11.93□□□□□ -0.5
SSBP1-212ENST00000489378 RIC3Q7Z5B4 369 aa11.93□□□□□ -0.5
SSBP1-212ENST00000489378 CDC5LQ99459 802 aaKnown RBP11.93□□□□□ -0.5
SSBP1-212ENST00000489378 MYD88Q99836 296 aa11.93□□□□□ -0.5
SSBP1-212ENST00000489378 EVI5O60447 810 aa11.92□□□□□ -0.5
SSBP1-212ENST00000489378 GNRH1P01148 92 aa11.92□□□□□ -0.5
SSBP1-212ENST00000489378 GRK4P32298 578 aa11.92□□□□□ -0.5
SSBP1-212ENST00000489378 VGLL4Q14135 290 aa11.92□□□□□ -0.5
SSBP1-212ENST00000489378 HS6ST3Q8IZP7 471 aa11.92□□□□□ -0.5
SSBP1-212ENST00000489378 RNF208Q9H0X6 261 aa11.92□□□□□ -0.5
SSBP1-212ENST00000489378 HYPKQ9NX55 129 aa11.92□□□□□ -0.5
SSBP1-212ENST00000489378 MTMR10Q9NXD2 777 aa11.92□□□□□ -0.5
SSBP1-212ENST00000489378 SRRDQ9UH36 339 aa11.92□□□□□ -0.5
SSBP1-212ENST00000489378 CHL1O00533 1208 aa11.91□□□□□ -0.5
SSBP1-212ENST00000489378 MYO1BO43795 1136 aa11.91□□□□□ -0.5
SSBP1-212ENST00000489378 NUDT7P0C024 238 aa11.91□□□□□ -0.5
SSBP1-212ENST00000489378 CTSWP56202 376 aa11.91□□□□□ -0.5
SSBP1-212ENST00000489378 CCDC191Q8NCU4 936 aa11.91□□□□□ -0.5
SSBP1-212ENST00000489378 TRIM47Q96LD4 638 aa11.91□□□□□ -0.5
SSBP1-212ENST00000489378 GREM2Q9H772 168 aa11.91□□□□□ -0.5
SSBP1-212ENST00000489378 CWC25Q9NXE8 425 aaPredicted RBP11.91□□□□□ -0.5
SSBP1-212ENST00000489378 LEMD3Q9Y2U8 911 aa11.91□□□□□ -0.5
SSBP1-212ENST00000489378 RIPOR2Q9Y4F9 1068 aa11.91□□□□□ -0.5
SSBP1-212ENST00000489378 PCDHGA4Q9Y5G9 962 aa11.91□□□□□ -0.5
SSBP1-212ENST00000489378 ALPK3Q96L96 1907 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 175.5 ms