RNA–Protein interactions for RNA: ENST00000489215.5

PTPN18-213, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 460 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-213ENST00000489215 DEFB129Q9H1M3 183 aa29.65■■■□□ 2.34
PTPN18-213ENST00000489215 CCDC102BQ68D86 513 aa29.64■■■□□ 2.34
PTPN18-213ENST00000489215 WBP1LQ9NX94 342 aa29.64■■■□□ 2.34
PTPN18-213ENST00000489215 PAPPA2Q9BXP8 1791 aa29.64■■■□□ 2.34
PTPN18-213ENST00000489215 OS9Q13438 667 aaPredicted RBP29.63■■■□□ 2.33
PTPN18-213ENST00000489215 NEUROD6Q96NK8 337 aa29.63■■■□□ 2.33
PTPN18-213ENST00000489215 SALL1Q9NSC2 1324 aa29.63■■■□□ 2.33
PTPN18-213ENST00000489215 SURF6O75683 361 aaKnown RBP29.62■■■□□ 2.33
PTPN18-213ENST00000489215 PHKA1P46020 1223 aa29.62■■■□□ 2.33
PTPN18-213ENST00000489215 ZNF157P51786 506 aaPredicted RBP29.62■■■□□ 2.33
PTPN18-213ENST00000489215 SUPT20HL1Q3ZLR7 823 aa29.62■■■□□ 2.33
PTPN18-213ENST00000489215 GORABQ5T7V8 394 aa29.62■■■□□ 2.33
PTPN18-213ENST00000489215 HHIPL2Q6UWX4 724 aa29.62■■■□□ 2.33
PTPN18-213ENST00000489215 XAGE2Q96GT9 111 aa29.62■■■□□ 2.33
PTPN18-213ENST00000489215 C1orf115Q9H7X2 142 aa29.62■■■□□ 2.33
PTPN18-213ENST00000489215 VEZTQ9HBM0 779 aa29.62■■■□□ 2.33
PTPN18-213ENST00000489215 GPR108Q9NPR9 543 aa29.62■■■□□ 2.33
PTPN18-213ENST00000489215 PDS5AQ29RF7 1337 aaKnown RBP29.62■■■□□ 2.33
PTPN18-213ENST00000489215 THSD7BQ9C0I4 1608 aa29.61■■■□□ 2.33
PTPN18-213ENST00000489215 TNNI2P48788 182 aa29.61■■■□□ 2.33
PTPN18-213ENST00000489215 TTLL12Q14166 644 aaPredicted RBP29.61■■■□□ 2.33
PTPN18-213ENST00000489215 PDE3AQ14432 1141 aa29.61■■■□□ 2.33
PTPN18-213ENST00000489215 SPDYE2Q495Y8 402 aa29.61■■■□□ 2.33
PTPN18-213ENST00000489215 ARMC9Q7Z3E5 817 aa29.61■■■□□ 2.33
PTPN18-213ENST00000489215 SCAF8Q9UPN6 1271 aaKnown RBP29.61■■■□□ 2.33
PTPN18-213ENST00000489215 NOP58Q9Y2X3 529 aaKnown RBP29.61■■■□□ 2.33
PTPN18-213ENST00000489215 CLRN2A0PK11 232 aa29.6■■■□□ 2.33
PTPN18-213ENST00000489215 PRAMEF18Q5VWM3 479 aa29.6■■■□□ 2.33
PTPN18-213ENST00000489215 ZDHHC15Q96MV8 337 aa29.6■■■□□ 2.33
PTPN18-213ENST00000489215 ZNF70Q9UC06 446 aaPredicted RBP29.6■■■□□ 2.33
PTPN18-213ENST00000489215 PCDHAC2Q9Y5I4 1007 aa29.6■■■□□ 2.33
PTPN18-213ENST00000489215 LDHBP07195 334 aaKnown RBP29.59■■■□□ 2.33
PTPN18-213ENST00000489215 TDRD3Q9H7E2 651 aaKnown RBP29.59■■■□□ 2.33
PTPN18-213ENST00000489215 PPP1R12BO60237 982 aaPredicted RBP29.58■■■□□ 2.33
PTPN18-213ENST00000489215 PCNTO95613 3336 aa29.58■■■□□ 2.33
PTPN18-213ENST00000489215 ADORA1P30542 326 aa29.58■■■□□ 2.33
PTPN18-213ENST00000489215 CEP85Q6P2H3 762 aa29.58■■■□□ 2.33
PTPN18-213ENST00000489215 RPAP2Q8IXW5 612 aaPredicted RBP29.58■■■□□ 2.33
PTPN18-213ENST00000489215 REM2Q8IYK8 340 aaPredicted RBP29.58■■■□□ 2.33
PTPN18-213ENST00000489215 TMOD2Q9NZR1 351 aa29.58■■■□□ 2.33
PTPN18-213ENST00000489215 CTCFP49711 727 aaPredicted RBP29.57■■■□□ 2.32
PTPN18-213ENST00000489215 GRIK5Q16478 980 aa29.57■■■□□ 2.32
PTPN18-213ENST00000489215 HSP90AB4PQ58FF6 505 aa29.57■■■□□ 2.32
PTPN18-213ENST00000489215 SPTY2D1Q68D10 685 aaPredicted RBP29.57■■■□□ 2.32
PTPN18-213ENST00000489215 COG6Q9Y2V7 657 aa29.57■■■□□ 2.32
PTPN18-213ENST00000489215 CA12O43570 354 aa29.56■■■□□ 2.32
PTPN18-213ENST00000489215 AOC2O75106 756 aa29.56■■■□□ 2.32
PTPN18-213ENST00000489215 RASA3Q14644 834 aa29.56■■■□□ 2.32
PTPN18-213ENST00000489215 SLF2Q8IX21 1173 aa29.56■■■□□ 2.32
PTPN18-213ENST00000489215 UNCXA6NJT0 531 aa29.55■■■□□ 2.32
PTPN18-213ENST00000489215 HMMRO75330 724 aa29.55■■■□□ 2.32
PTPN18-213ENST00000489215 UQCRFS1P1P0C7P4 283 aa29.55■■■□□ 2.32
PTPN18-213ENST00000489215 FKBP1CQ5VVH2 108 aa29.55■■■□□ 2.32
PTPN18-213ENST00000489215 ERC1Q8IUD2 1116 aa29.55■■■□□ 2.32
PTPN18-213ENST00000489215 SLC10A3P09131 477 aa29.54■■■□□ 2.32
PTPN18-213ENST00000489215 RASGRF1Q13972 1273 aa29.54■■■□□ 2.32
PTPN18-213ENST00000489215 ZBTB40Q9NUA8 1239 aa29.54■■■□□ 2.32
PTPN18-213ENST00000489215 FAM155AB1AL88 458 aaPredicted RBP29.53■■■□□ 2.32
PTPN18-213ENST00000489215 UBE2Q2LH0YL09 131 aa29.53■■■□□ 2.32
PTPN18-213ENST00000489215 FOXN1O15353 648 aa29.53■■■□□ 2.32
PTPN18-213ENST00000489215 TNNI3KQ59H18 835 aa29.53■■■□□ 2.32
PTPN18-213ENST00000489215 CCDC158Q5M9N0 1113 aa29.53■■■□□ 2.32
PTPN18-213ENST00000489215 FPGT-TNNI3KV9GXZ4 949 aa29.53■■■□□ 2.32
PTPN18-213ENST00000489215 MAP3K11Q16584 847 aa29.52■■■□□ 2.32
PTPN18-213ENST00000489215 ARID4AP29374 1257 aaPredicted RBP29.51■■■□□ 2.31
PTPN18-213ENST00000489215 PRDX5P30044 214 aa29.51■■■□□ 2.31
PTPN18-213ENST00000489215 APOBEC3HQ6NTF7 200 aaKnown RBP29.51■■■□□ 2.31
PTPN18-213ENST00000489215 FAM83AQ86UY5 434 aa29.51■■■□□ 2.31
PTPN18-213ENST00000489215 HOOK2Q96ED9 719 aa29.51■■■□□ 2.31
PTPN18-213ENST00000489215 PRDM10Q9NQV6 1147 aa29.51■■■□□ 2.31
PTPN18-213ENST00000489215 ANGEL1Q9UNK9 670 aaKnown RBP29.51■■■□□ 2.31
PTPN18-213ENST00000489215 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP29.51■■■□□ 2.31
PTPN18-213ENST00000489215 TCP10L2B9ZVM9 353 aa29.5■■■□□ 2.31
PTPN18-213ENST00000489215 SPATA5Q8NB90 893 aa29.5■■■□□ 2.31
PTPN18-213ENST00000489215 ABCF2Q9UG63 623 aa29.5■■■□□ 2.31
PTPN18-213ENST00000489215 AOX1Q06278 1338 aa29.49■■■□□ 2.31
PTPN18-213ENST00000489215 IREB2P48200 963 aaKnown RBP29.49■■■□□ 2.31
PTPN18-213ENST00000489215 LDLRAD1Q5T700 205 aa29.49■■■□□ 2.31
PTPN18-213ENST00000489215 MOB2Q70IA6 237 aa29.49■■■□□ 2.31
PTPN18-213ENST00000489215 DZIP1Q86YF9 867 aaKnown RBP29.49■■■□□ 2.31
PTPN18-213ENST00000489215 RASAL3Q86YV0 1011 aa29.49■■■□□ 2.31
PTPN18-213ENST00000489215 KIF23Q02241 960 aaPredicted RBP29.48■■■□□ 2.31
PTPN18-213ENST00000489215 PRKG1Q13976 671 aa29.48■■■□□ 2.31
PTPN18-213ENST00000489215 NBPF12Q5TAG4 269 aaPredicted RBP29.48■■■□□ 2.31
PTPN18-213ENST00000489215 ERICH6Q7L0X2 663 aa29.48■■■□□ 2.31
PTPN18-213ENST00000489215 HMG20BQ9P0W2 317 aa29.48■■■□□ 2.31
PTPN18-213ENST00000489215 IGSF3O75054 1194 aa29.47■■■□□ 2.31
PTPN18-213ENST00000489215 TTC39AQ5SRH9 613 aa29.47■■■□□ 2.31
PTPN18-213ENST00000489215 ZNF512BQ96KM6 892 aaPredicted RBP29.47■■■□□ 2.31
PTPN18-213ENST00000489215 DAGLAQ9Y4D2 1042 aa29.47■■■□□ 2.31
PTPN18-213ENST00000489215 FAM163AQ96GL9 167 aaPredicted RBP29.46■■■□□ 2.31
PTPN18-213ENST00000489215 GSTO1P78417 241 aa29.45■■■□□ 2.31
PTPN18-213ENST00000489215 DIXDC1Q155Q3 683 aa29.45■■■□□ 2.31
PTPN18-213ENST00000489215 SLC10A4Q96EP9 437 aa29.45■■■□□ 2.31
PTPN18-213ENST00000489215 LDHCP07864 332 aa29.44■■■□□ 2.3
PTPN18-213ENST00000489215 TEPSINQ96N21 525 aa29.44■■■□□ 2.3
PTPN18-213ENST00000489215 EXOC6BQ9Y2D4 811 aa29.44■■■□□ 2.3
PTPN18-213ENST00000489215 MYH2Q9UKX2 1941 aa29.43■■■□□ 2.3
PTPN18-213ENST00000489215 HSPA8P11142 646 aaKnown RBP29.43■■■□□ 2.3
PTPN18-213ENST00000489215 LBX1P52954 281 aa29.43■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms