RNA–Protein interactions for RNA: ENST00000488958.5

PHF11-215, Transcript of PHD finger protein 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHF11, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF11-215ENST00000488958 COPRSQ9NQ92 184 aa9.68□□□□□ -0.86
PHF11-215ENST00000488958 SAMM50Q9Y512 469 aa9.68□□□□□ -0.86
PHF11-215ENST00000488958 SPDYE3A6NKU9 549 aa9.67□□□□□ -0.86
PHF11-215ENST00000488958 F6X3S4 739 aa9.67□□□□□ -0.86
PHF11-215ENST00000488958 RLBP1P12271 317 aa9.67□□□□□ -0.86
PHF11-215ENST00000488958 NME2P22392 152 aa9.67□□□□□ -0.86
PHF11-215ENST00000488958 TRIM28Q13263 835 aaKnown RBP9.67□□□□□ -0.86
PHF11-215ENST00000488958 SUZ12Q15022 739 aaKnown RBP9.67□□□□□ -0.86
PHF11-215ENST00000488958 ERMP1Q7Z2K6 904 aa9.67□□□□□ -0.86
PHF11-215ENST00000488958 FBXO11Q86XK2 927 aa9.67□□□□□ -0.86
PHF11-215ENST00000488958 SULF2Q8IWU5 870 aa9.67□□□□□ -0.86
PHF11-215ENST00000488958 RSRP1Q9BUV0 290 aa9.67□□□□□ -0.86
PHF11-215ENST00000488958 FAM229AH3BQW9 127 aa9.66□□□□□ -0.86
PHF11-215ENST00000488958 ARNTP27540 789 aa9.66□□□□□ -0.86
PHF11-215ENST00000488958 ERCC5P28715 1186 aaPredicted RBP9.66□□□□□ -0.86
PHF11-215ENST00000488958 LIG3P49916 1009 aa9.66□□□□□ -0.86
PHF11-215ENST00000488958 PCNX4Q63HM2 1172 aa9.66□□□□□ -0.86
PHF11-215ENST00000488958 TTBK2Q6IQ55 1244 aa9.66□□□□□ -0.86
PHF11-215ENST00000488958 FMR1NBQ8N0W7 255 aaPredicted RBP9.66□□□□□ -0.86
PHF11-215ENST00000488958 STK35Q8TDR2 534 aa9.66□□□□□ -0.86
PHF11-215ENST00000488958 KBTBD4Q9NVX7 518 aa9.66□□□□□ -0.86
PHF11-215ENST00000488958 TM4SF5O14894 197 aa9.65□□□□□ -0.86
PHF11-215ENST00000488958 DDX3YO15523 660 aaKnown RBP9.65□□□□□ -0.86
PHF11-215ENST00000488958 EIF4EBP3O60516 100 aaPredicted RBP9.65□□□□□ -0.86
PHF11-215ENST00000488958 BMP6P22004 513 aa9.65□□□□□ -0.86
PHF11-215ENST00000488958 GBP2P32456 591 aaPredicted RBP9.65□□□□□ -0.86
PHF11-215ENST00000488958 CD68P34810 354 aaPredicted RBP9.65□□□□□ -0.86
PHF11-215ENST00000488958 NLRP12P59046 1061 aa9.65□□□□□ -0.86
PHF11-215ENST00000488958 AP3B2Q13367 1082 aa9.65□□□□□ -0.86
PHF11-215ENST00000488958 PWP1Q13610 501 aa9.65□□□□□ -0.86
PHF11-215ENST00000488958 ZNF394Q53GI3 561 aa9.65□□□□□ -0.86
PHF11-215ENST00000488958 USP48Q86UV5 1035 aa9.65□□□□□ -0.86
PHF11-215ENST00000488958 CBX8Q9HC52 389 aa9.65□□□□□ -0.86
PHF11-215ENST00000488958 MINDY4BA8MYZ0 360 aa9.64□□□□□ -0.87
PHF11-215ENST00000488958 CYP11A1P05108 521 aa9.64□□□□□ -0.87
PHF11-215ENST00000488958 DCAF11Q8TEB1 546 aa9.64□□□□□ -0.87
PHF11-215ENST00000488958 TMEM74Q96NL1 305 aa9.64□□□□□ -0.87
PHF11-215ENST00000488958 EMILIN2Q9BXX0 1053 aa9.64□□□□□ -0.87
PHF11-215ENST00000488958 KCNK4Q9NYG8 393 aa9.64□□□□□ -0.87
PHF11-215ENST00000488958 NOP53Q9NZM5 478 aaKnown RBP9.64□□□□□ -0.87
PHF11-215ENST00000488958 TLR6Q9Y2C9 796 aa9.64□□□□□ -0.87
PHF11-215ENST00000488958 PCDHGB7Q9Y5F8 929 aa9.64□□□□□ -0.87
PHF11-215ENST00000488958 POU4F3Q15319 338 aa9.63□□□□□ -0.87
PHF11-215ENST00000488958 FOXD4L6Q3SYB3 417 aaPredicted RBP9.63□□□□□ -0.87
PHF11-215ENST00000488958 PRRT3Q5FWE3 981 aa9.63□□□□□ -0.87
PHF11-215ENST00000488958 RASIP1Q5U651 963 aa9.63□□□□□ -0.87
PHF11-215ENST00000488958 FOXD4L3Q6VB84 417 aaPredicted RBP9.63□□□□□ -0.87
PHF11-215ENST00000488958 PHC3Q8NDX5 983 aa9.63□□□□□ -0.87
PHF11-215ENST00000488958 SCARF2Q96GP6 870 aaPredicted RBP9.63□□□□□ -0.87
PHF11-215ENST00000488958 CORO1BQ9BR76 489 aa9.63□□□□□ -0.87
PHF11-215ENST00000488958 USP26Q9BXU7 913 aa9.63□□□□□ -0.87
PHF11-215ENST00000488958 DDX41Q9UJV9 622 aaKnown RBP9.63□□□□□ -0.87
PHF11-215ENST00000488958 DLL1O00548 723 aa9.62□□□□□ -0.87
PHF11-215ENST00000488958 ADAM11O75078 769 aa9.62□□□□□ -0.87
PHF11-215ENST00000488958 MAOBP27338 520 aa9.62□□□□□ -0.87
PHF11-215ENST00000488958 RAD51AP2Q09MP3 1159 aa9.62□□□□□ -0.87
PHF11-215ENST00000488958 LRRC14Q15048 493 aa9.62□□□□□ -0.87
PHF11-215ENST00000488958 AGMOQ6ZNB7 445 aa9.62□□□□□ -0.87
PHF11-215ENST00000488958 GRIN3AQ8TCU5 1115 aa9.62□□□□□ -0.87
PHF11-215ENST00000488958 ZC3H12CQ9C0D7 883 aaKnown RBP9.62□□□□□ -0.87
PHF11-215ENST00000488958 NRSN2Q9GZP1 204 aa9.62□□□□□ -0.87
PHF11-215ENST00000488958 CYP8B1Q9UNU6 501 aa9.62□□□□□ -0.87
PHF11-215ENST00000488958 ECEL1O95672 775 aa9.61□□□□□ -0.87
PHF11-215ENST00000488958 GSTP1P09211 210 aaKnown RBP9.61□□□□□ -0.87
PHF11-215ENST00000488958 LMNB1P20700 586 aa9.61□□□□□ -0.87
PHF11-215ENST00000488958 RPS26P62854 115 aaKnown RBP9.61□□□□□ -0.87
PHF11-215ENST00000488958 RACK1P63244 317 aaKnown RBP9.61□□□□□ -0.87
PHF11-215ENST00000488958 ZNF654Q8IZM8 581 aa9.61□□□□□ -0.87
PHF11-215ENST00000488958 KCNB2Q92953 911 aa9.61□□□□□ -0.87
PHF11-215ENST00000488958 TGIF2Q9GZN2 237 aa9.61□□□□□ -0.87
PHF11-215ENST00000488958 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.61□□□□□ -0.87
PHF11-215ENST00000488958 ELNP15502 786 aa9.6□□□□□ -0.87
PHF11-215ENST00000488958 TFE3P19532 575 aaPredicted RBP9.6□□□□□ -0.87
PHF11-215ENST00000488958 LLGL2Q6P1M3 1020 aa9.6□□□□□ -0.87
PHF11-215ENST00000488958 PDZD3Q86UT5 571 aa9.6□□□□□ -0.87
PHF11-215ENST00000488958 LOC100289279A0A1B0GTE1 492 aa9.59□□□□□ -0.87
PHF11-215ENST00000488958 FAM181BA6NEQ2 426 aa9.59□□□□□ -0.87
PHF11-215ENST00000488958 PF4P02776 101 aa9.59□□□□□ -0.87
PHF11-215ENST00000488958 CTSBP07858 339 aa9.59□□□□□ -0.87
PHF11-215ENST00000488958 ZNF252P-AS1Q0IIN9 211 aa9.59□□□□□ -0.87
PHF11-215ENST00000488958 DUOXA2Q1HG44 320 aa9.59□□□□□ -0.87
PHF11-215ENST00000488958 MAP1SQ66K74 1059 aaPredicted RBP9.59□□□□□ -0.87
PHF11-215ENST00000488958 UBASH3BQ8TF42 649 aa9.59□□□□□ -0.87
PHF11-215ENST00000488958 CCSER2Q9H7U1 834 aa9.59□□□□□ -0.87
PHF11-215ENST00000488958 PCDHB5Q9Y5E4 795 aa9.59□□□□□ -0.87
PHF11-215ENST00000488958 EIF4A3P38919 411 aaKnown RBP9.58□□□□□ -0.88
PHF11-215ENST00000488958 FAM160A1Q05DH4 1040 aa9.58□□□□□ -0.88
PHF11-215ENST00000488958 CAMK2GQ13555 558 aaPredicted RBP9.58□□□□□ -0.88
PHF11-215ENST00000488958 GRIK4Q16099 956 aa9.58□□□□□ -0.88
PHF11-215ENST00000488958 IGF2-ASQ6U949 168 aa9.58□□□□□ -0.88
PHF11-215ENST00000488958 MPRIPQ6WCQ1 1025 aa9.58□□□□□ -0.88
PHF11-215ENST00000488958 RHOVQ96L33 236 aa9.58□□□□□ -0.88
PHF11-215ENST00000488958 ACBD3Q9H3P7 528 aa9.58□□□□□ -0.88
PHF11-215ENST00000488958 COL8A1P27658 744 aa9.57□□□□□ -0.88
PHF11-215ENST00000488958 LMNB2Q03252 620 aa9.57□□□□□ -0.88
PHF11-215ENST00000488958 PDE3AQ14432 1141 aa9.57□□□□□ -0.88
PHF11-215ENST00000488958 MIR1-1HGQ9H1L0 117 aa9.57□□□□□ -0.88
PHF11-215ENST00000488958 CCDC86Q9H6F5 360 aaKnown RBP9.57□□□□□ -0.88
PHF11-215ENST00000488958 ADAMTS1Q9UHI8 967 aa9.57□□□□□ -0.88
PHF11-215ENST00000488958 WISP1O95388 367 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms