RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 SUPT20HL1Q3ZLR7 823 aa14.88□□□□□ -0.03
CCHCR1-215ENST00000488920 SPDYE2Q495Y8 402 aa14.88□□□□□ -0.03
CCHCR1-215ENST00000488920 TCP10L2B9ZVM9 353 aa14.87□□□□□ -0.03
CCHCR1-215ENST00000488920 PPP1R12BO60237 982 aaPredicted RBP14.87□□□□□ -0.03
CCHCR1-215ENST00000488920 GNAI3P08754 354 aa14.87□□□□□ -0.03
CCHCR1-215ENST00000488920 TRIM27P14373 513 aa14.87□□□□□ -0.03
CCHCR1-215ENST00000488920 CLUAP1Q96AJ1 413 aa14.87□□□□□ -0.03
CCHCR1-215ENST00000488920 SLC10A4Q96EP9 437 aa14.87□□□□□ -0.03
CCHCR1-215ENST00000488920 FBXO3Q9UK99 471 aa14.87□□□□□ -0.03
CCHCR1-215ENST00000488920 IL15P40933 162 aaPredicted RBP14.86□□□□□ -0.03
CCHCR1-215ENST00000488920 ATP2B3Q16720 1220 aa14.86□□□□□ -0.03
CCHCR1-215ENST00000488920 ATF7IPQ6VMQ6 1270 aa14.86□□□□□ -0.03
CCHCR1-215ENST00000488920 TEKT1Q969V4 418 aa14.86□□□□□ -0.03
CCHCR1-215ENST00000488920 CLMNQ96JQ2 1002 aa14.86□□□□□ -0.03
CCHCR1-215ENST00000488920 MCOLN1Q9GZU1 580 aa14.86□□□□□ -0.03
CCHCR1-215ENST00000488920 COPRSQ9NQ92 184 aa14.86□□□□□ -0.03
CCHCR1-215ENST00000488920 COL1A1P02452 1464 aaPredicted RBP14.86□□□□□ -0.03
CCHCR1-215ENST00000488920 SRGAP3O43295 1099 aa14.85□□□□□ -0.03
CCHCR1-215ENST00000488920 USP2O75604 605 aaPredicted RBP14.85□□□□□ -0.03
CCHCR1-215ENST00000488920 TM4SF4P48230 202 aa14.85□□□□□ -0.03
CCHCR1-215ENST00000488920 HDLBPQ00341 1268 aaKnown RBP14.85□□□□□ -0.03
CCHCR1-215ENST00000488920 DGKZQ13574 1117 aa14.85□□□□□ -0.03
CCHCR1-215ENST00000488920 TNFAIP1Q13829 316 aa14.85□□□□□ -0.03
CCHCR1-215ENST00000488920 MAP3K11Q16584 847 aa14.85□□□□□ -0.03
CCHCR1-215ENST00000488920 SPRYD7Q5W111 196 aa14.85□□□□□ -0.03
CCHCR1-215ENST00000488920 CDAN1Q8IWY9 1227 aa14.85□□□□□ -0.03
CCHCR1-215ENST00000488920 SSC5DA1L4H1 1573 aa14.85□□□□□ -0.03
CCHCR1-215ENST00000488920 CCDC85CA6NKD9 419 aa14.84□□□□□ -0.03
CCHCR1-215ENST00000488920 TBC1D8O95759 1140 aa14.84□□□□□ -0.03
CCHCR1-215ENST00000488920 CACNB3P54284 484 aa14.84□□□□□ -0.03
CCHCR1-215ENST00000488920 WDR66Q8TBY9 1149 aa14.84□□□□□ -0.03
CCHCR1-215ENST00000488920 ZDHHC15Q96MV8 337 aa14.84□□□□□ -0.03
CCHCR1-215ENST00000488920 MRIQ9BWK5 157 aa14.84□□□□□ -0.03
CCHCR1-215ENST00000488920 TMEM39BQ9GZU3 492 aa14.84□□□□□ -0.03
CCHCR1-215ENST00000488920 SUGT1Q9Y2Z0 365 aa14.84□□□□□ -0.03
CCHCR1-215ENST00000488920 ADORA1P30542 326 aa14.83□□□□□ -0.04
CCHCR1-215ENST00000488920 PHKA1P46020 1223 aa14.83□□□□□ -0.04
CCHCR1-215ENST00000488920 IREB2P48200 963 aaKnown RBP14.83□□□□□ -0.04
CCHCR1-215ENST00000488920 TIMM10P62072 90 aa14.83□□□□□ -0.04
CCHCR1-215ENST00000488920 APOBEC3HQ6NTF7 200 aaKnown RBP14.83□□□□□ -0.04
CCHCR1-215ENST00000488920 TEPSINQ96N21 525 aa14.83□□□□□ -0.04
CCHCR1-215ENST00000488920 GNL3LQ9NVN8 582 aaKnown RBP14.83□□□□□ -0.04
CCHCR1-215ENST00000488920 GNAI2P04899 355 aa14.82□□□□□ -0.04
CCHCR1-215ENST00000488920 TNNI2P48788 182 aa14.82□□□□□ -0.04
CCHCR1-215ENST00000488920 SREBF2Q12772 1141 aa14.82□□□□□ -0.04
CCHCR1-215ENST00000488920 TFCP2Q12800 502 aa14.82□□□□□ -0.04
CCHCR1-215ENST00000488920 ZKSCAN2Q63HK3 967 aa14.82□□□□□ -0.04
CCHCR1-215ENST00000488920 TMEM57Q8N5G2 664 aa14.82□□□□□ -0.04
CCHCR1-215ENST00000488920 WNK4Q96J92 1243 aa14.82□□□□□ -0.04
CCHCR1-215ENST00000488920 MAST3O60307 1309 aa14.82□□□□□ -0.04
CCHCR1-215ENST00000488920 UNCXA6NJT0 531 aa14.81□□□□□ -0.04
CCHCR1-215ENST00000488920 MTX1Q13505 466 aa14.81□□□□□ -0.04
CCHCR1-215ENST00000488920 HHIPL2Q6UWX4 724 aa14.81□□□□□ -0.04
CCHCR1-215ENST00000488920 ANKRD13AQ8IZ07 590 aa14.81□□□□□ -0.04
CCHCR1-215ENST00000488920 TMOD2Q9NZR1 351 aa14.81□□□□□ -0.04
CCHCR1-215ENST00000488920 CASP8AP2Q9UKL3 1982 aa14.81□□□□□ -0.04
CCHCR1-215ENST00000488920 MANSC4A6NHS7 340 aaPredicted RBP14.8□□□□□ -0.04
CCHCR1-215ENST00000488920 LDHBP07195 334 aaKnown RBP14.8□□□□□ -0.04
CCHCR1-215ENST00000488920 PRDX5P30044 214 aa14.8□□□□□ -0.04
CCHCR1-215ENST00000488920 GJA5P36382 358 aa14.8□□□□□ -0.04
CCHCR1-215ENST00000488920 DIXDC1Q155Q3 683 aa14.8□□□□□ -0.04
CCHCR1-215ENST00000488920 CCDC102BQ68D86 513 aa14.8□□□□□ -0.04
CCHCR1-215ENST00000488920 R3HDMLQ9H3Y0 253 aa14.8□□□□□ -0.04
CCHCR1-215ENST00000488920 ELP3Q9H9T3 547 aa14.8□□□□□ -0.04
CCHCR1-215ENST00000488920 DENND2AQ9ULE3 1009 aa14.8□□□□□ -0.04
CCHCR1-215ENST00000488920 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.8□□□□□ -0.04
CCHCR1-215ENST00000488920 PNMA6EA0A0J9YXQ4 647 aa14.79□□□□□ -0.04
CCHCR1-215ENST00000488920 A0A1B0GUL7 405 aa14.79□□□□□ -0.04
CCHCR1-215ENST00000488920 SEMA3EO15041 775 aa14.79□□□□□ -0.04
CCHCR1-215ENST00000488920 ZBTB48P10074 688 aaPredicted RBP14.79□□□□□ -0.04
CCHCR1-215ENST00000488920 INHBEP58166 350 aa14.79□□□□□ -0.04
CCHCR1-215ENST00000488920 ZNF296Q8WUU4 475 aaPredicted RBP14.79□□□□□ -0.04
CCHCR1-215ENST00000488920 XAGE2Q96GT9 111 aa14.79□□□□□ -0.04
CCHCR1-215ENST00000488920 NEUROD6Q96NK8 337 aa14.79□□□□□ -0.04
CCHCR1-215ENST00000488920 AKAP2Q9Y2D5 859 aa14.79□□□□□ -0.04
CCHCR1-215ENST00000488920 DAGLAQ9Y4D2 1042 aa14.79□□□□□ -0.04
CCHCR1-215ENST00000488920 GPR25O00155 361 aa14.78□□□□□ -0.04
CCHCR1-215ENST00000488920 MAP3K9P80192 1104 aa14.78□□□□□ -0.04
CCHCR1-215ENST00000488920 FKBP1CQ5VVH2 108 aa14.78□□□□□ -0.04
CCHCR1-215ENST00000488920 CDC42EP5Q6NZY7 148 aa14.78□□□□□ -0.04
CCHCR1-215ENST00000488920 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.78□□□□□ -0.04
CCHCR1-215ENST00000488920 CTU1Q7Z7A3 348 aaKnown RBP14.78□□□□□ -0.04
CCHCR1-215ENST00000488920 FAM83AQ86UY5 434 aa14.78□□□□□ -0.04
CCHCR1-215ENST00000488920 IFNL1Q8IU54 200 aa14.78□□□□□ -0.04
CCHCR1-215ENST00000488920 OPTNQ96CV9 577 aa14.78□□□□□ -0.04
CCHCR1-215ENST00000488920 SALL1Q9NSC2 1324 aa14.77□□□□□ -0.04
CCHCR1-215ENST00000488920 IGF2BP3O00425 579 aaKnown RBP eCLIP14.77□□□□□ -0.05
CCHCR1-215ENST00000488920 ALDH1A1P00352 501 aa14.77□□□□□ -0.05
CCHCR1-215ENST00000488920 TCP10Q12799 353 aa14.77□□□□□ -0.05
CCHCR1-215ENST00000488920 G3BP1Q13283 466 aaKnown RBP eCLIP14.77□□□□□ -0.05
CCHCR1-215ENST00000488920 RASGRF1Q13972 1273 aa14.77□□□□□ -0.05
CCHCR1-215ENST00000488920 VGLL4Q14135 290 aa14.77□□□□□ -0.05
CCHCR1-215ENST00000488920 FTSJ3Q8IY81 847 aaKnown RBP14.77□□□□□ -0.05
CCHCR1-215ENST00000488920 CNKSR2Q8WXI2 1034 aa14.77□□□□□ -0.05
CCHCR1-215ENST00000488920 USP40Q9NVE5 1235 aa14.77□□□□□ -0.05
CCHCR1-215ENST00000488920 RLBP1P12271 317 aa14.76□□□□□ -0.05
CCHCR1-215ENST00000488920 MVPQ14764 893 aaKnown RBP14.76□□□□□ -0.05
CCHCR1-215ENST00000488920 MIGA2Q7L4E1 593 aa14.76□□□□□ -0.05
CCHCR1-215ENST00000488920 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.76□□□□□ -0.05
CCHCR1-215ENST00000488920 C1orf115Q9H7X2 142 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms