RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 ADCK5Q3MIX3 580 aa13.06□□□□□ -0.32
COL21A1-211ENST00000488912 RNF20Q5VTR2 975 aa13.06□□□□□ -0.32
COL21A1-211ENST00000488912 HSCBQ8IWL3 235 aa13.06□□□□□ -0.32
COL21A1-211ENST00000488912 MIGA1Q8NAN2 632 aa13.06□□□□□ -0.32
COL21A1-211ENST00000488912 NSUN4Q96CB9 384 aaKnown RBP13.06□□□□□ -0.32
COL21A1-211ENST00000488912 RTFDC1Q9BY42 306 aaPredicted RBP13.06□□□□□ -0.32
COL21A1-211ENST00000488912 UPF3BQ9BZI7 483 aaKnown RBP13.06□□□□□ -0.32
COL21A1-211ENST00000488912 COA1Q9GZY4 146 aa13.06□□□□□ -0.32
COL21A1-211ENST00000488912 PPP1R1BQ9UD71 204 aaPredicted RBP13.06□□□□□ -0.32
COL21A1-211ENST00000488912 DAXXQ9UER7 740 aaPredicted RBP13.06□□□□□ -0.32
COL21A1-211ENST00000488912 MYH2Q9UKX2 1941 aa13.05□□□□□ -0.32
COL21A1-211ENST00000488912 LAMA4Q16363 1823 aa13.05□□□□□ -0.32
COL21A1-211ENST00000488912 NEK4P51957 841 aa13.05□□□□□ -0.32
COL21A1-211ENST00000488912 NAA16Q6N069 864 aaPredicted RBP13.05□□□□□ -0.32
COL21A1-211ENST00000488912 ILDR2Q71H61 639 aa13.05□□□□□ -0.32
COL21A1-211ENST00000488912 ZGPATQ8N5A5 531 aaKnown RBP13.05□□□□□ -0.32
COL21A1-211ENST00000488912 STRBPQ96SI9 672 aaKnown RBP13.05□□□□□ -0.32
COL21A1-211ENST00000488912 EYA3Q99504 573 aa13.05□□□□□ -0.32
COL21A1-211ENST00000488912 ARMT1Q9H993 441 aa13.05□□□□□ -0.32
COL21A1-211ENST00000488912 SCN9AQ15858 1988 aa13.05□□□□□ -0.32
COL21A1-211ENST00000488912 CYP21A2P08686 494 aa13.05□□□□□ -0.32
COL21A1-211ENST00000488912 GRIK5Q16478 980 aa13.05□□□□□ -0.32
COL21A1-211ENST00000488912 DOK7Q18PE1 504 aa13.05□□□□□ -0.32
COL21A1-211ENST00000488912 CC2D2BQ6DHV5 1058 aa13.05□□□□□ -0.32
COL21A1-211ENST00000488912 LCORLQ8N3X6 602 aa13.05□□□□□ -0.32
COL21A1-211ENST00000488912 ST18O60284 1047 aa13.04□□□□□ -0.32
COL21A1-211ENST00000488912 SPTY2D1Q68D10 685 aaPredicted RBP13.04□□□□□ -0.32
COL21A1-211ENST00000488912 TTLL5Q6EMB2 1281 aa13.04□□□□□ -0.32
COL21A1-211ENST00000488912 KLHL34Q8N239 644 aa13.04□□□□□ -0.32
COL21A1-211ENST00000488912 JAKMIP1Q96N16 626 aaKnown RBP13.04□□□□□ -0.32
COL21A1-211ENST00000488912 RTN4Q9NQC3 1192 aaKnown RBP13.04□□□□□ -0.32
COL21A1-211ENST00000488912 RPAP1Q9BWH6 1393 aaPredicted RBP13.04□□□□□ -0.32
COL21A1-211ENST00000488912 ZNF646O15015 1829 aaPredicted RBP13.04□□□□□ -0.32
COL21A1-211ENST00000488912 LDHBP07195 334 aaKnown RBP13.04□□□□□ -0.32
COL21A1-211ENST00000488912 CASTP20810 708 aaKnown RBP13.04□□□□□ -0.32
COL21A1-211ENST00000488912 DZIP1Q86YF9 867 aaKnown RBP13.04□□□□□ -0.32
COL21A1-211ENST00000488912 FGAP02671 866 aa13.03□□□□□ -0.32
COL21A1-211ENST00000488912 CPA1P15085 419 aa13.03□□□□□ -0.32
COL21A1-211ENST00000488912 GTF2IP78347 998 aa13.03□□□□□ -0.32
COL21A1-211ENST00000488912 COL9A3Q14050 684 aaPredicted RBP13.03□□□□□ -0.32
COL21A1-211ENST00000488912 TSGA10IPQ3SY00 556 aa13.03□□□□□ -0.32
COL21A1-211ENST00000488912 CCDC93Q567U6 631 aa13.03□□□□□ -0.32
COL21A1-211ENST00000488912 MFSD14BQ5SR56 506 aa13.03□□□□□ -0.32
COL21A1-211ENST00000488912 DBNDD1Q9H9R9 158 aa13.03□□□□□ -0.32
COL21A1-211ENST00000488912 PIM2Q9P1W9 311 aa13.03□□□□□ -0.32
COL21A1-211ENST00000488912 FAM205AQ6ZU69 1335 aa13.03□□□□□ -0.32
COL21A1-211ENST00000488912 BAZ2AQ9UIF9 1905 aaKnown RBP13.03□□□□□ -0.32
COL21A1-211ENST00000488912 MAGEB6P1A0A0J9YX57 407 aa13.02□□□□□ -0.32
COL21A1-211ENST00000488912 AOC3Q16853 763 aa13.02□□□□□ -0.32
COL21A1-211ENST00000488912 RIOK1Q9BRS2 568 aaKnown RBP13.02□□□□□ -0.32
COL21A1-211ENST00000488912 CD2APQ9Y5K6 639 aa13.02□□□□□ -0.32
COL21A1-211ENST00000488912 G3V3G9 751 aa13.02□□□□□ -0.33
COL21A1-211ENST00000488912 K7ELQ4 463 aaPredicted RBP13.02□□□□□ -0.33
COL21A1-211ENST00000488912 PRKAB2O43741 272 aa13.02□□□□□ -0.33
COL21A1-211ENST00000488912 APPP05067 770 aa13.02□□□□□ -0.33
COL21A1-211ENST00000488912 DCAF8Q5TAQ9 597 aa13.02□□□□□ -0.33
COL21A1-211ENST00000488912 TM6SF1Q9BZW5 370 aa13.02□□□□□ -0.33
COL21A1-211ENST00000488912 EPB41L4AQ9HCS5 686 aaPredicted RBP13.02□□□□□ -0.33
COL21A1-211ENST00000488912 FER1L6Q2WGJ9 1857 aa13.01□□□□□ -0.33
COL21A1-211ENST00000488912 DYNLL1P63167 89 aaKnown RBP13.01□□□□□ -0.33
COL21A1-211ENST00000488912 DIXDC1Q155Q3 683 aa13.01□□□□□ -0.33
COL21A1-211ENST00000488912 STOX1Q6ZVD7 989 aa13.01□□□□□ -0.33
COL21A1-211ENST00000488912 RTKN2Q8IZC4 609 aa13.01□□□□□ -0.33
COL21A1-211ENST00000488912 TBC1D22AQ8WUA7 517 aa13.01□□□□□ -0.33
COL21A1-211ENST00000488912 FBXW7Q969H0 707 aa13.01□□□□□ -0.33
COL21A1-211ENST00000488912 ZSWIM6Q9HCJ5 1215 aa13.01□□□□□ -0.33
COL21A1-211ENST00000488912 CTNNA3Q9UI47 895 aa13.01□□□□□ -0.33
COL21A1-211ENST00000488912 SLC4A4Q9Y6R1 1079 aa13.01□□□□□ -0.33
COL21A1-211ENST00000488912 GSG1L2A8MUP6 293 aa13.01□□□□□ -0.33
COL21A1-211ENST00000488912 ECE2O60344 883 aa13.01□□□□□ -0.33
COL21A1-211ENST00000488912 GNAT2P19087 354 aa13.01□□□□□ -0.33
COL21A1-211ENST00000488912 HAND2P61296 217 aa13.01□□□□□ -0.33
COL21A1-211ENST00000488912 KIAA2012Q0VF49 1180 aa13.01□□□□□ -0.33
COL21A1-211ENST00000488912 GRIPAP1Q4V328 841 aa13.01□□□□□ -0.33
COL21A1-211ENST00000488912 TMED8Q6PL24 325 aaPredicted RBP13.01□□□□□ -0.33
COL21A1-211ENST00000488912 PODNQ7Z5L7 613 aa13.01□□□□□ -0.33
COL21A1-211ENST00000488912 SUPT20HQ8NEM7 779 aa13.01□□□□□ -0.33
COL21A1-211ENST00000488912 TTC14Q96N46 770 aa13.01□□□□□ -0.33
COL21A1-211ENST00000488912 AATFQ9NY61 560 aaKnown RBP eCLIP13.01□□□□□ -0.33
COL21A1-211ENST00000488912 CDK5RAP2Q96SN8 1893 aa13□□□□□ -0.33
COL21A1-211ENST00000488912 PSME4Q14997 1843 aa13□□□□□ -0.33
COL21A1-211ENST00000488912 PATL2C9JE40 543 aaKnown RBP13□□□□□ -0.33
COL21A1-211ENST00000488912 KRT32Q14532 448 aa13□□□□□ -0.33
COL21A1-211ENST00000488912 DALRD3Q5D0E6 543 aaKnown RBP13□□□□□ -0.33
COL21A1-211ENST00000488912 RUFY3Q7L099 469 aa13□□□□□ -0.33
COL21A1-211ENST00000488912 IFNL3Q8IZI9 196 aa13□□□□□ -0.33
COL21A1-211ENST00000488912 CERS5Q8N5B7 392 aa13□□□□□ -0.33
COL21A1-211ENST00000488912 SPRYD3Q8NCJ5 442 aa13□□□□□ -0.33
COL21A1-211ENST00000488912 PSMD1Q99460 953 aa13□□□□□ -0.33
COL21A1-211ENST00000488912 KCNQ5Q9NR82 932 aa13□□□□□ -0.33
COL21A1-211ENST00000488912 CYP46A1Q9Y6A2 500 aa13□□□□□ -0.33
COL21A1-211ENST00000488912 ZMYM6O95789 1325 aa13□□□□□ -0.33
COL21A1-211ENST00000488912 PPIP5K2O43314 1243 aa13□□□□□ -0.33
COL21A1-211ENST00000488912 IGSF3O75054 1194 aa13□□□□□ -0.33
COL21A1-211ENST00000488912 PSMA5P28066 241 aa13□□□□□ -0.33
COL21A1-211ENST00000488912 IMMTQ16891 758 aaKnown RBP13□□□□□ -0.33
COL21A1-211ENST00000488912 SDR42E1Q8WUS8 393 aa13□□□□□ -0.33
COL21A1-211ENST00000488912 MXD3Q9BW11 206 aa13□□□□□ -0.33
COL21A1-211ENST00000488912 E7EWF7 191 aa12.99□□□□□ -0.33
COL21A1-211ENST00000488912 GSTO1P78417 241 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms