RNA–Protein interactions for RNA: ENST00000488848.1

USP11-209, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 904 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-209ENST00000488848 GNAT2P19087 354 aa12.85□□□□□ -0.35
USP11-209ENST00000488848 PPP4CP60510 307 aa12.85□□□□□ -0.35
USP11-209ENST00000488848 GSTO1P78417 241 aa12.85□□□□□ -0.35
USP11-209ENST00000488848 NECTIN1Q15223 517 aa12.85□□□□□ -0.35
USP11-209ENST00000488848 DACT2Q5SW24 774 aa12.85□□□□□ -0.35
USP11-209ENST00000488848 KIF2CQ99661 725 aa12.85□□□□□ -0.35
USP11-209ENST00000488848 RIOK1Q9BRS2 568 aaKnown RBP12.85□□□□□ -0.35
USP11-209ENST00000488848 FHDC1Q9C0D6 1143 aaPredicted RBP12.85□□□□□ -0.35
USP11-209ENST00000488848 PUS7LQ9H0K6 701 aaKnown RBP12.85□□□□□ -0.35
USP11-209ENST00000488848 ANO2Q9NQ90 1003 aa12.85□□□□□ -0.35
USP11-209ENST00000488848 LRP2BPQ9P2M1 347 aa12.85□□□□□ -0.35
USP11-209ENST00000488848 RBM19Q9Y4C8 960 aaKnown RBP12.85□□□□□ -0.35
USP11-209ENST00000488848 MYH2Q9UKX2 1941 aa12.85□□□□□ -0.35
USP11-209ENST00000488848 M0R2C6 588 aa12.84□□□□□ -0.35
USP11-209ENST00000488848 GPAA1O43292 621 aa12.84□□□□□ -0.35
USP11-209ENST00000488848 ECE2O60344 883 aa12.84□□□□□ -0.35
USP11-209ENST00000488848 FRAT2O75474 233 aaPredicted RBP12.84□□□□□ -0.35
USP11-209ENST00000488848 CHGBP05060 677 aa12.84□□□□□ -0.35
USP11-209ENST00000488848 LDHBP07195 334 aaKnown RBP12.84□□□□□ -0.35
USP11-209ENST00000488848 PRDX5P30044 214 aa12.84□□□□□ -0.35
USP11-209ENST00000488848 IARSP41252 1262 aaKnown RBP12.84□□□□□ -0.35
USP11-209ENST00000488848 MECOMQ03112 1051 aa12.84□□□□□ -0.35
USP11-209ENST00000488848 MFSD14BQ5SR56 506 aa12.84□□□□□ -0.35
USP11-209ENST00000488848 GIMAP6Q6P9H5 292 aa12.84□□□□□ -0.35
USP11-209ENST00000488848 KIAA1211Q6ZU35 1233 aa12.84□□□□□ -0.35
USP11-209ENST00000488848 MAGEB6Q8N7X4 407 aa12.84□□□□□ -0.35
USP11-209ENST00000488848 STRBPQ96SI9 672 aaKnown RBP12.84□□□□□ -0.35
USP11-209ENST00000488848 SYT17Q9BSW7 474 aa12.84□□□□□ -0.35
USP11-209ENST00000488848 IQSEC3Q9UPP2 1182 aaPredicted RBP12.84□□□□□ -0.35
USP11-209ENST00000488848 SBF1O95248 1867 aa12.84□□□□□ -0.35
USP11-209ENST00000488848 CDK5RAP2Q96SN8 1893 aa12.83□□□□□ -0.36
USP11-209ENST00000488848 PPIP5K2O43314 1243 aa12.83□□□□□ -0.36
USP11-209ENST00000488848 HSPD1P10809 573 aaKnown RBP12.83□□□□□ -0.36
USP11-209ENST00000488848 MCCP23508 829 aa12.83□□□□□ -0.36
USP11-209ENST00000488848 AOC3Q16853 763 aa12.83□□□□□ -0.36
USP11-209ENST00000488848 NAA16Q6N069 864 aaPredicted RBP12.83□□□□□ -0.36
USP11-209ENST00000488848 SLF2Q8IX21 1173 aa12.83□□□□□ -0.36
USP11-209ENST00000488848 CERS5Q8N5B7 392 aa12.83□□□□□ -0.36
USP11-209ENST00000488848 SEC62Q99442 399 aaKnown RBP12.83□□□□□ -0.36
USP11-209ENST00000488848 GMLQ99445 158 aa12.83□□□□□ -0.36
USP11-209ENST00000488848 U3KPZ7 1027 aaPredicted RBP12.83□□□□□ -0.36
USP11-209ENST00000488848 MROH7-TTC4A0A0A0MT08 1334 aa12.83□□□□□ -0.36
USP11-209ENST00000488848 UTRNP46939 3433 aa12.82□□□□□ -0.36
USP11-209ENST00000488848 GPR75-ASB3A0A0A6YYF3 556 aa12.82□□□□□ -0.36
USP11-209ENST00000488848 USP17L3A6NCW0 530 aa12.82□□□□□ -0.36
USP11-209ENST00000488848 USP17L4A6NCW7 530 aa12.82□□□□□ -0.36
USP11-209ENST00000488848 YDJCA8MPS7 323 aa12.82□□□□□ -0.36
USP11-209ENST00000488848 LDHCP07864 332 aa12.82□□□□□ -0.36
USP11-209ENST00000488848 VIL1P09327 827 aaKnown RBP12.82□□□□□ -0.36
USP11-209ENST00000488848 NT5C2P49902 561 aa12.82□□□□□ -0.36
USP11-209ENST00000488848 PTH1RQ03431 593 aa12.82□□□□□ -0.36
USP11-209ENST00000488848 TTLL5Q6EMB2 1281 aa12.82□□□□□ -0.36
USP11-209ENST00000488848 HHIPL2Q6UWX4 724 aa12.82□□□□□ -0.36
USP11-209ENST00000488848 USP17L1Q7RTZ2 530 aa12.82□□□□□ -0.36
USP11-209ENST00000488848 ADGRA1Q86SQ6 560 aa12.82□□□□□ -0.36
USP11-209ENST00000488848 TM6SF1Q9BZW5 370 aa12.82□□□□□ -0.36
USP11-209ENST00000488848 RAI14Q9P0K7 980 aa12.82□□□□□ -0.36
USP11-209ENST00000488848 ABCF2Q9UG63 623 aa12.82□□□□□ -0.36
USP11-209ENST00000488848 ZNRF3Q9ULT6 936 aa12.82□□□□□ -0.36
USP11-209ENST00000488848 RIMBP2O15034 1052 aa12.81□□□□□ -0.36
USP11-209ENST00000488848 CYP7A1P22680 504 aa12.81□□□□□ -0.36
USP11-209ENST00000488848 GTF2IP78347 998 aa12.81□□□□□ -0.36
USP11-209ENST00000488848 CHAF1AQ13111 956 aaPredicted RBP12.81□□□□□ -0.36
USP11-209ENST00000488848 AIDAQ96BJ3 306 aa12.81□□□□□ -0.36
USP11-209ENST00000488848 DBNDD1Q9H9R9 158 aa12.81□□□□□ -0.36
USP11-209ENST00000488848 TAOK2Q9UL54 1235 aa12.81□□□□□ -0.36
USP11-209ENST00000488848 BCS1LQ9Y276 419 aa12.81□□□□□ -0.36
USP11-209ENST00000488848 RBM8AQ9Y5S9 174 aaKnown RBP12.81□□□□□ -0.36
USP11-209ENST00000488848 LAMB1P07942 1786 aa12.81□□□□□ -0.36
USP11-209ENST00000488848 COL2A1P02458 1487 aaPredicted RBP12.8□□□□□ -0.36
USP11-209ENST00000488848 FZD9O00144 591 aa12.8□□□□□ -0.36
USP11-209ENST00000488848 NPM3O75607 178 aaKnown RBP12.8□□□□□ -0.36
USP11-209ENST00000488848 MBD4O95243 580 aa12.8□□□□□ -0.36
USP11-209ENST00000488848 PLCG2P16885 1265 aa12.8□□□□□ -0.36
USP11-209ENST00000488848 RABEP1Q15276 862 aa12.8□□□□□ -0.36
USP11-209ENST00000488848 GRIK5Q16478 980 aa12.8□□□□□ -0.36
USP11-209ENST00000488848 DOK7Q18PE1 504 aa12.8□□□□□ -0.36
USP11-209ENST00000488848 SLFNL1Q499Z3 407 aa12.8□□□□□ -0.36
USP11-209ENST00000488848 RNF20Q5VTR2 975 aa12.8□□□□□ -0.36
USP11-209ENST00000488848 DZIP1Q86YF9 867 aaKnown RBP12.8□□□□□ -0.36
USP11-209ENST00000488848 LARGE2Q8N3Y3 721 aa12.8□□□□□ -0.36
USP11-209ENST00000488848 AGBL3Q8NEM8 1001 aa12.8□□□□□ -0.36
USP11-209ENST00000488848 ZNF277Q9NRM2 450 aaPredicted RBP12.8□□□□□ -0.36
USP11-209ENST00000488848 MKRN1Q9UHC7 482 aaKnown RBP12.8□□□□□ -0.36
USP11-209ENST00000488848 CTNNA3Q9UI47 895 aa12.8□□□□□ -0.36
USP11-209ENST00000488848 SERPINA10Q9UK55 444 aa12.8□□□□□ -0.36
USP11-209ENST00000488848 ECM29Q5VYK3 1845 aa12.8□□□□□ -0.36
USP11-209ENST00000488848 ZC3H4Q9UPT8 1303 aaKnown RBP12.8□□□□□ -0.36
USP11-209ENST00000488848 MAGEB6P1A0A0J9YX57 407 aa12.79□□□□□ -0.36
USP11-209ENST00000488848 GSG1L2A8MUP6 293 aa12.79□□□□□ -0.36
USP11-209ENST00000488848 PATL2C9JE40 543 aaKnown RBP12.79□□□□□ -0.36
USP11-209ENST00000488848 RPS12P25398 132 aaKnown RBP12.79□□□□□ -0.36
USP11-209ENST00000488848 KRT32Q14532 448 aa12.79□□□□□ -0.36
USP11-209ENST00000488848 VPS53Q5VIR6 699 aa12.79□□□□□ -0.36
USP11-209ENST00000488848 CREB3L3Q68CJ9 461 aa12.79□□□□□ -0.36
USP11-209ENST00000488848 RSBN1LQ6PCB5 846 aaPredicted RBP12.79□□□□□ -0.36
USP11-209ENST00000488848 CCDC129Q6ZRS4 1044 aa12.79□□□□□ -0.36
USP11-209ENST00000488848 NIM1KQ8IY84 436 aa12.79□□□□□ -0.36
USP11-209ENST00000488848 LCORLQ8N3X6 602 aa12.79□□□□□ -0.36
USP11-209ENST00000488848 MTMR14Q8NCE2 650 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms