RNA–Protein interactions for RNA: ENST00000488828.1

NUP98-212, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 712 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-212ENST00000488828 MFRPQ9BY79 579 aa13.63□□□□□ -0.23
NUP98-212ENST00000488828 GNL3LQ9NVN8 582 aaKnown RBP13.63□□□□□ -0.23
NUP98-212ENST00000488828 F8W031 263 aaPredicted RBP13.62□□□□□ -0.23
NUP98-212ENST00000488828 HMMRO75330 724 aa13.62□□□□□ -0.23
NUP98-212ENST00000488828 RRP1P56182 461 aaKnown RBP13.62□□□□□ -0.23
NUP98-212ENST00000488828 CEP85Q6P2H3 762 aa13.62□□□□□ -0.23
NUP98-212ENST00000488828 FBXO33Q7Z6M2 555 aa13.62□□□□□ -0.23
NUP98-212ENST00000488828 CNTROBQ8N137 903 aa13.62□□□□□ -0.23
NUP98-212ENST00000488828 SSH3Q8TE77 659 aa13.62□□□□□ -0.23
NUP98-212ENST00000488828 ZBTB40Q9NUA8 1239 aa13.62□□□□□ -0.23
NUP98-212ENST00000488828 HDAC9Q9UKV0 1011 aa13.62□□□□□ -0.23
NUP98-212ENST00000488828 MYO3BQ8WXR4 1341 aa13.62□□□□□ -0.23
NUP98-212ENST00000488828 APBB1O00213 710 aa13.61□□□□□ -0.23
NUP98-212ENST00000488828 HSPA6P17066 643 aa13.61□□□□□ -0.23
NUP98-212ENST00000488828 FGFR2P21802 821 aa13.61□□□□□ -0.23
NUP98-212ENST00000488828 KIF4BQ2VIQ3 1234 aa13.61□□□□□ -0.23
NUP98-212ENST00000488828 RPAP2Q8IXW5 612 aaPredicted RBP13.61□□□□□ -0.23
NUP98-212ENST00000488828 TDRD7Q8NHU6 1098 aaKnown RBP13.61□□□□□ -0.23
NUP98-212ENST00000488828 SCN4AP35499 1836 aa13.61□□□□□ -0.23
NUP98-212ENST00000488828 IRS2Q9Y4H2 1338 aa13.61□□□□□ -0.23
NUP98-212ENST00000488828 RBM5P52756 815 aaKnown RBP eCLIP13.6□□□□□ -0.23
NUP98-212ENST00000488828 HIRAP54198 1017 aaPredicted RBP13.6□□□□□ -0.23
NUP98-212ENST00000488828 FBXO22Q8NEZ5 403 aa13.6□□□□□ -0.23
NUP98-212ENST00000488828 TRPM4Q8TD43 1214 aa13.6□□□□□ -0.23
NUP98-212ENST00000488828 DCPSQ96C86 337 aaKnown RBP13.6□□□□□ -0.23
NUP98-212ENST00000488828 MS4A4AQ96JQ5 239 aa13.6□□□□□ -0.23
NUP98-212ENST00000488828 GMLQ99445 158 aa13.6□□□□□ -0.23
NUP98-212ENST00000488828 MYOZ2Q9NPC6 264 aa13.6□□□□□ -0.23
NUP98-212ENST00000488828 A0A1B0GUL7 405 aa13.59□□□□□ -0.23
NUP98-212ENST00000488828 EGFRP00533 1210 aa13.59□□□□□ -0.23
NUP98-212ENST00000488828 PRKCSHP14314 528 aaPredicted RBP13.59□□□□□ -0.23
NUP98-212ENST00000488828 ADORA1P30542 326 aa13.59□□□□□ -0.23
NUP98-212ENST00000488828 MFSD14BQ5SR56 506 aa13.59□□□□□ -0.23
NUP98-212ENST00000488828 EXOC6BQ9Y2D4 811 aa13.59□□□□□ -0.23
NUP98-212ENST00000488828 APLP1P51693 650 aa13.58□□□□□ -0.24
NUP98-212ENST00000488828 ZNF280AP59817 542 aaPredicted RBP13.58□□□□□ -0.24
NUP98-212ENST00000488828 SCARF1Q14162 830 aa13.58□□□□□ -0.24
NUP98-212ENST00000488828 HSP90AB4PQ58FF6 505 aa13.58□□□□□ -0.24
NUP98-212ENST00000488828 ZC3H15Q8WU90 426 aaKnown RBP13.58□□□□□ -0.24
NUP98-212ENST00000488828 XAGE2Q96GT9 111 aa13.58□□□□□ -0.24
NUP98-212ENST00000488828 SUPT16HQ9Y5B9 1047 aaKnown RBP13.58□□□□□ -0.24
NUP98-212ENST00000488828 PHKA1P46020 1223 aa13.57□□□□□ -0.24
NUP98-212ENST00000488828 DLGAP5Q15398 846 aa13.57□□□□□ -0.24
NUP98-212ENST00000488828 CCDC102BQ68D86 513 aa13.57□□□□□ -0.24
NUP98-212ENST00000488828 CDC37L1Q7L3B6 337 aa13.57□□□□□ -0.24
NUP98-212ENST00000488828 USP48Q86UV5 1035 aa13.57□□□□□ -0.24
NUP98-212ENST00000488828 ERC1Q8IUD2 1116 aa13.57□□□□□ -0.24
NUP98-212ENST00000488828 CERS5Q8N5B7 392 aa13.57□□□□□ -0.24
NUP98-212ENST00000488828 TBC1D22AQ8WUA7 517 aa13.57□□□□□ -0.24
NUP98-212ENST00000488828 WDR70Q9NW82 654 aa13.57□□□□□ -0.24
NUP98-212ENST00000488828 TTF2Q9UNY4 1162 aaKnown RBP13.57□□□□□ -0.24
NUP98-212ENST00000488828 NOP58Q9Y2X3 529 aaKnown RBP13.57□□□□□ -0.24
NUP98-212ENST00000488828 SCN9AQ15858 1988 aa13.57□□□□□ -0.24
NUP98-212ENST00000488828 FAM205AQ6ZU69 1335 aa13.57□□□□□ -0.24
NUP98-212ENST00000488828 TRAF5O00463 557 aa13.56□□□□□ -0.24
NUP98-212ENST00000488828 ITGBL1O95965 494 aaPredicted RBP13.56□□□□□ -0.24
NUP98-212ENST00000488828 MMP14P50281 582 aa13.56□□□□□ -0.24
NUP98-212ENST00000488828 FKBP1AP62942 108 aaKnown RBP13.56□□□□□ -0.24
NUP98-212ENST00000488828 ANGEL2Q5VTE6 544 aaKnown RBP13.56□□□□□ -0.24
NUP98-212ENST00000488828 KRT26Q7Z3Y9 468 aa13.56□□□□□ -0.24
NUP98-212ENST00000488828 SULF1Q8IWU6 871 aa13.56□□□□□ -0.24
NUP98-212ENST00000488828 WDR66Q8TBY9 1149 aa13.56□□□□□ -0.24
NUP98-212ENST00000488828 CRBNQ96SW2 442 aa13.56□□□□□ -0.24
NUP98-212ENST00000488828 GLIS2Q9BZE0 524 aaPredicted RBP13.56□□□□□ -0.24
NUP98-212ENST00000488828 ZNF408Q9H9D4 720 aa13.56□□□□□ -0.24
NUP98-212ENST00000488828 DENND2AQ9ULE3 1009 aa13.56□□□□□ -0.24
NUP98-212ENST00000488828 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.56□□□□□ -0.24
NUP98-212ENST00000488828 MYO1BO43795 1136 aa13.55□□□□□ -0.24
NUP98-212ENST00000488828 HTRA3P83110 453 aa13.55□□□□□ -0.24
NUP98-212ENST00000488828 NBPF9Q3BBW0 867 aa13.55□□□□□ -0.24
NUP98-212ENST00000488828 TNNI3KQ59H18 835 aa13.55□□□□□ -0.24
NUP98-212ENST00000488828 CCDC158Q5M9N0 1113 aa13.55□□□□□ -0.24
NUP98-212ENST00000488828 SIRT2Q8IXJ6 389 aa13.55□□□□□ -0.24
NUP98-212ENST00000488828 GGA3Q9NZ52 723 aa13.55□□□□□ -0.24
NUP98-212ENST00000488828 PGAP2Q9UHJ9 254 aa13.55□□□□□ -0.24
NUP98-212ENST00000488828 FPGT-TNNI3KV9GXZ4 949 aa13.55□□□□□ -0.24
NUP98-212ENST00000488828 SEMA3EO15041 775 aa13.54□□□□□ -0.24
NUP98-212ENST00000488828 FMR1Q06787 632 aaKnown RBP eCLIP13.54□□□□□ -0.24
NUP98-212ENST00000488828 CFAP100Q494V2 611 aa13.54□□□□□ -0.24
NUP98-212ENST00000488828 TTC39AQ5SRH9 613 aa13.54□□□□□ -0.24
NUP98-212ENST00000488828 CCDC8Q9H0W5 538 aaPredicted RBP13.54□□□□□ -0.24
NUP98-212ENST00000488828 IL1RAPL2Q9NP60 686 aa13.54□□□□□ -0.24
NUP98-212ENST00000488828 GPR108Q9NPR9 543 aa13.54□□□□□ -0.24
NUP98-212ENST00000488828 ABCF2Q9UG63 623 aa13.54□□□□□ -0.24
NUP98-212ENST00000488828 ASTN2O75129 1339 aaPredicted RBP13.54□□□□□ -0.24
NUP98-212ENST00000488828 A0A1B0GUL6 1792 aa13.53□□□□□ -0.24
NUP98-212ENST00000488828 TMEM88BA6NKF7 163 aa13.53□□□□□ -0.24
NUP98-212ENST00000488828 WNT10BO00744 389 aa13.53□□□□□ -0.24
NUP98-212ENST00000488828 RAB11FIP3O75154 756 aa13.53□□□□□ -0.24
NUP98-212ENST00000488828 LDHBP07195 334 aaKnown RBP13.53□□□□□ -0.24
NUP98-212ENST00000488828 AACSQ86V21 672 aa13.53□□□□□ -0.24
NUP98-212ENST00000488828 CLASRPQ8N2M8 674 aaKnown RBP13.53□□□□□ -0.24
NUP98-212ENST00000488828 RHPN1Q8TCX5 695 aa13.53□□□□□ -0.24
NUP98-212ENST00000488828 OTUD5Q96G74 571 aa13.53□□□□□ -0.24
NUP98-212ENST00000488828 ABT1Q9ULW3 272 aaKnown RBP13.53□□□□□ -0.24
NUP98-212ENST00000488828 SCAF8Q9UPN6 1271 aaKnown RBP13.53□□□□□ -0.24
NUP98-212ENST00000488828 ADM5C9JUS6 153 aa13.52□□□□□ -0.25
NUP98-212ENST00000488828 CELF2O95319 508 aaKnown RBP13.52□□□□□ -0.25
NUP98-212ENST00000488828 IFIT2P09913 472 aaKnown RBP13.52□□□□□ -0.25
NUP98-212ENST00000488828 UQCRFS1P1P0C7P4 283 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms