RNA–Protein interactions for RNA: ENST00000488631.1

PDPN-206, Transcript of podoplanin, humanhuman

TSL 3

Gene PDPN, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-206ENST00000488631 CERS5Q8N5B7 392 aa12.09□□□□□ -0.47
PDPN-206ENST00000488631 GMLQ99445 158 aa12.09□□□□□ -0.47
PDPN-206ENST00000488631 ZBTB47Q9UFB7 747 aaPredicted RBP12.09□□□□□ -0.47
PDPN-206ENST00000488631 MKRN1Q9UHC7 482 aaKnown RBP12.09□□□□□ -0.47
PDPN-206ENST00000488631 SCAF8Q9UPN6 1271 aaKnown RBP12.09□□□□□ -0.47
PDPN-206ENST00000488631 SCN4AP35499 1836 aa12.09□□□□□ -0.47
PDPN-206ENST00000488631 ASTN2O75129 1339 aaPredicted RBP12.09□□□□□ -0.47
PDPN-206ENST00000488631 FAM205AQ6ZU69 1335 aa12.09□□□□□ -0.47
PDPN-206ENST00000488631 IRS2Q9Y4H2 1338 aa12.09□□□□□ -0.47
PDPN-206ENST00000488631 LTBP1Q14766 1721 aa12.08□□□□□ -0.47
PDPN-206ENST00000488631 CLRN2A0PK11 232 aa12.08□□□□□ -0.48
PDPN-206ENST00000488631 FKBP1AP62942 108 aaKnown RBP12.08□□□□□ -0.48
PDPN-206ENST00000488631 FMR1Q06787 632 aaKnown RBP eCLIP12.08□□□□□ -0.48
PDPN-206ENST00000488631 TNNI3KQ59H18 835 aa12.08□□□□□ -0.48
PDPN-206ENST00000488631 CCDC8Q9H0W5 538 aaPredicted RBP12.08□□□□□ -0.48
PDPN-206ENST00000488631 TMOD2Q9NZR1 351 aa12.08□□□□□ -0.48
PDPN-206ENST00000488631 FPGT-TNNI3KV9GXZ4 949 aa12.08□□□□□ -0.48
PDPN-206ENST00000488631 WNT10BO00744 389 aa12.07□□□□□ -0.48
PDPN-206ENST00000488631 LDHBP07195 334 aaKnown RBP12.07□□□□□ -0.48
PDPN-206ENST00000488631 IFIT2P09913 472 aaKnown RBP12.07□□□□□ -0.48
PDPN-206ENST00000488631 UQCRFS1P1P0C7P4 283 aa12.07□□□□□ -0.48
PDPN-206ENST00000488631 NF2P35240 595 aa12.07□□□□□ -0.48
PDPN-206ENST00000488631 AACSQ86V21 672 aa12.07□□□□□ -0.48
PDPN-206ENST00000488631 DZIP1Q86YF9 867 aaKnown RBP12.07□□□□□ -0.48
PDPN-206ENST00000488631 ZGPATQ8N5A5 531 aaKnown RBP12.07□□□□□ -0.48
PDPN-206ENST00000488631 C2orf69Q8N8R5 385 aa12.07□□□□□ -0.48
PDPN-206ENST00000488631 TEKT1Q969V4 418 aa12.07□□□□□ -0.48
PDPN-206ENST00000488631 CRBNQ96SW2 442 aa12.07□□□□□ -0.48
PDPN-206ENST00000488631 IL1RAPL2Q9NP60 686 aa12.07□□□□□ -0.48
PDPN-206ENST00000488631 SUPT16HQ9Y5B9 1047 aaKnown RBP12.07□□□□□ -0.48
PDPN-206ENST00000488631 MAST3O60307 1309 aa12.07□□□□□ -0.48
PDPN-206ENST00000488631 SEMA3EO15041 775 aa12.06□□□□□ -0.48
PDPN-206ENST00000488631 CRKP46108 304 aa12.06□□□□□ -0.48
PDPN-206ENST00000488631 SPTY2D1Q68D10 685 aaPredicted RBP12.06□□□□□ -0.48
PDPN-206ENST00000488631 DLK2Q6UY11 383 aa12.06□□□□□ -0.48
PDPN-206ENST00000488631 APOBEC3FQ8IUX4 373 aaKnown RBP12.06□□□□□ -0.48
PDPN-206ENST00000488631 CLASRPQ8N2M8 674 aaKnown RBP12.06□□□□□ -0.48
PDPN-206ENST00000488631 SNRKQ9NRH2 765 aa12.06□□□□□ -0.48
PDPN-206ENST00000488631 RAI14Q9P0K7 980 aa12.06□□□□□ -0.48
PDPN-206ENST00000488631 PASKQ96RG2 1323 aa12.06□□□□□ -0.48
PDPN-206ENST00000488631 RAB11FIP3O75154 756 aa12.05□□□□□ -0.48
PDPN-206ENST00000488631 PRKG1Q13976 671 aa12.05□□□□□ -0.48
PDPN-206ENST00000488631 DEFB115Q30KQ5 88 aa12.05□□□□□ -0.48
PDPN-206ENST00000488631 PRAMEF18Q5VWM3 479 aa12.05□□□□□ -0.48
PDPN-206ENST00000488631 ERICH6Q7L0X2 663 aa12.05□□□□□ -0.48
PDPN-206ENST00000488631 SLF2Q8IX21 1173 aa12.05□□□□□ -0.48
PDPN-206ENST00000488631 ZNF579Q8NAF0 562 aaKnown RBP12.05□□□□□ -0.48
PDPN-206ENST00000488631 SPATA5Q8NB90 893 aa12.05□□□□□ -0.48
PDPN-206ENST00000488631 KIF1BPQ96EK5 621 aa12.05□□□□□ -0.48
PDPN-206ENST00000488631 CDCA5Q96FF9 252 aa12.05□□□□□ -0.48
PDPN-206ENST00000488631 DBNDD2Q9BQY9 259 aa12.05□□□□□ -0.48
PDPN-206ENST00000488631 LRP2BPQ9P2M1 347 aa12.05□□□□□ -0.48
PDPN-206ENST00000488631 PGAP2Q9UHJ9 254 aa12.05□□□□□ -0.48
PDPN-206ENST00000488631 SERPINA10Q9UK55 444 aa12.05□□□□□ -0.48
PDPN-206ENST00000488631 NOP58Q9Y2X3 529 aaKnown RBP12.05□□□□□ -0.48
PDPN-206ENST00000488631 PCDHAC2Q9Y5I4 1007 aa12.05□□□□□ -0.48
PDPN-206ENST00000488631 TCP10L2B9ZVM9 353 aa12.04□□□□□ -0.48
PDPN-206ENST00000488631 TNNI2P48788 182 aa12.04□□□□□ -0.48
PDPN-206ENST00000488631 RASGRF1Q13972 1273 aa12.04□□□□□ -0.48
PDPN-206ENST00000488631 GRIK5Q16478 980 aa12.04□□□□□ -0.48
PDPN-206ENST00000488631 RHPN1Q8TCX5 695 aa12.04□□□□□ -0.48
PDPN-206ENST00000488631 PRMT6Q96LA8 375 aaPredicted RBP12.04□□□□□ -0.48
PDPN-206ENST00000488631 NOL10Q9BSC4 688 aaKnown RBP12.04□□□□□ -0.48
PDPN-206ENST00000488631 TDRD3Q9H7E2 651 aaKnown RBP12.04□□□□□ -0.48
PDPN-206ENST00000488631 GBA2Q9HCG7 927 aaPredicted RBP12.04□□□□□ -0.48
PDPN-206ENST00000488631 GPR108Q9NPR9 543 aa12.04□□□□□ -0.48
PDPN-206ENST00000488631 SUGT1Q9Y2Z0 365 aa12.04□□□□□ -0.48
PDPN-206ENST00000488631 HUNKP57058 714 aa12.03□□□□□ -0.48
PDPN-206ENST00000488631 TNFAIP1Q13829 316 aa12.03□□□□□ -0.48
PDPN-206ENST00000488631 KLRG1Q96E93 195 aa12.03□□□□□ -0.48
PDPN-206ENST00000488631 DEFB129Q9H1M3 183 aa12.03□□□□□ -0.48
PDPN-206ENST00000488631 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.03□□□□□ -0.48
PDPN-206ENST00000488631 SCN9AQ15858 1988 aa12.02□□□□□ -0.49
PDPN-206ENST00000488631 PRDX5P30044 214 aa12.02□□□□□ -0.49
PDPN-206ENST00000488631 ECE1P42892 770 aa12.02□□□□□ -0.49
PDPN-206ENST00000488631 IRX6P78412 446 aaPredicted RBP12.02□□□□□ -0.49
PDPN-206ENST00000488631 GSTO1P78417 241 aa12.02□□□□□ -0.49
PDPN-206ENST00000488631 DIXDC1Q155Q3 683 aa12.02□□□□□ -0.49
PDPN-206ENST00000488631 CST9Q5W186 159 aa12.02□□□□□ -0.49
PDPN-206ENST00000488631 TBC1D9Q6ZT07 1266 aa12.02□□□□□ -0.49
PDPN-206ENST00000488631 MTMR14Q8NCE2 650 aa12.02□□□□□ -0.49
PDPN-206ENST00000488631 EAF2Q96CJ1 260 aaPredicted RBP12.02□□□□□ -0.49
PDPN-206ENST00000488631 LRRCC1Q9C099 1032 aa12.02□□□□□ -0.49
PDPN-206ENST00000488631 HMG20BQ9P0W2 317 aa12.02□□□□□ -0.49
PDPN-206ENST00000488631 ZNF70Q9UC06 446 aaPredicted RBP12.02□□□□□ -0.49
PDPN-206ENST00000488631 PITPNM2Q9BZ72 1349 aa12.02□□□□□ -0.49
PDPN-206ENST00000488631 ZNF609O15014 1411 aa12.02□□□□□ -0.49
PDPN-206ENST00000488631 LDHCP07864 332 aa12.01□□□□□ -0.49
PDPN-206ENST00000488631 CACNB3P54284 484 aa12.01□□□□□ -0.49
PDPN-206ENST00000488631 HDLBPQ00341 1268 aaKnown RBP12.01□□□□□ -0.49
PDPN-206ENST00000488631 SUPT20HL1Q3ZLR7 823 aa12.01□□□□□ -0.49
PDPN-206ENST00000488631 PI16Q6UXB8 463 aa12.01□□□□□ -0.49
PDPN-206ENST00000488631 ARMC9Q7Z3E5 817 aa12.01□□□□□ -0.49
PDPN-206ENST00000488631 SIRT2Q8IXJ6 389 aa12.01□□□□□ -0.49
PDPN-206ENST00000488631 GPATCH3Q96I76 525 aa12.01□□□□□ -0.49
PDPN-206ENST00000488631 DNAJC2Q99543 621 aaKnown RBP12.01□□□□□ -0.49
PDPN-206ENST00000488631 TSPYL2Q9H2G4 693 aaPredicted RBP12.01□□□□□ -0.49
PDPN-206ENST00000488631 USP40Q9NVE5 1235 aa12.01□□□□□ -0.49
PDPN-206ENST00000488631 TLR7Q9NYK1 1049 aaKnown RBP12.01□□□□□ -0.49
PDPN-206ENST00000488631 DBNLQ9UJU6 430 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms