RNA–Protein interactions for RNA: ENST00000488623.5

CTNS-206, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-206ENST00000488623 ZNF589Q86UQ0 364 aaPredicted RBP18.22■□□□□ 0.51
CTNS-206ENST00000488623 ZGPATQ8N5A5 531 aaKnown RBP18.22■□□□□ 0.51
CTNS-206ENST00000488623 PUS7LQ9H0K6 701 aaKnown RBP18.22■□□□□ 0.51
CTNS-206ENST00000488623 GPBP1L1Q9HC44 474 aaPredicted RBP18.22■□□□□ 0.51
CTNS-206ENST00000488623 SCN9AQ15858 1988 aa18.22■□□□□ 0.51
CTNS-206ENST00000488623 LTBP3Q9NS15 1303 aa18.22■□□□□ 0.51
CTNS-206ENST00000488623 COL4A5P29400 1685 aa18.22■□□□□ 0.51
CTNS-206ENST00000488623 REC8O95072 547 aa18.21■□□□□ 0.51
CTNS-206ENST00000488623 MECOMQ03112 1051 aa18.21■□□□□ 0.51
CTNS-206ENST00000488623 MFSD14BQ5SR56 506 aa18.21■□□□□ 0.51
CTNS-206ENST00000488623 TBC1D22AQ8WUA7 517 aa18.21■□□□□ 0.51
CTNS-206ENST00000488623 FBXW7Q969H0 707 aa18.21■□□□□ 0.51
CTNS-206ENST00000488623 NSUN4Q96CB9 384 aaKnown RBP18.21■□□□□ 0.51
CTNS-206ENST00000488623 LSG1Q9H089 658 aaKnown RBP18.21■□□□□ 0.51
CTNS-206ENST00000488623 MAST3O60307 1309 aa18.21■□□□□ 0.51
CTNS-206ENST00000488623 LDHBP07195 334 aaKnown RBP18.2■□□□□ 0.5
CTNS-206ENST00000488623 CYP7A1P22680 504 aa18.2■□□□□ 0.5
CTNS-206ENST00000488623 PRELPP51888 382 aa18.2■□□□□ 0.5
CTNS-206ENST00000488623 RASSF7Q02833 373 aa18.2■□□□□ 0.5
CTNS-206ENST00000488623 PTH1RQ03431 593 aa18.2■□□□□ 0.5
CTNS-206ENST00000488623 CERS5Q8N5B7 392 aa18.2■□□□□ 0.5
CTNS-206ENST00000488623 MXD3Q9BW11 206 aa18.2■□□□□ 0.5
CTNS-206ENST00000488623 ANO2Q9NQ90 1003 aa18.2■□□□□ 0.5
CTNS-206ENST00000488623 USP17L3A6NCW0 530 aa18.19■□□□□ 0.5
CTNS-206ENST00000488623 USP17L4A6NCW7 530 aa18.19■□□□□ 0.5
CTNS-206ENST00000488623 IGSF3O75054 1194 aa18.19■□□□□ 0.5
CTNS-206ENST00000488623 DACT2Q5SW24 774 aa18.19■□□□□ 0.5
CTNS-206ENST00000488623 STRIP1Q5VSL9 837 aa18.19■□□□□ 0.5
CTNS-206ENST00000488623 NAA16Q6N069 864 aaPredicted RBP18.19■□□□□ 0.5
CTNS-206ENST00000488623 KIAA1211Q6ZU35 1233 aa18.19■□□□□ 0.5
CTNS-206ENST00000488623 USP17L1Q7RTZ2 530 aa18.19■□□□□ 0.5
CTNS-206ENST00000488623 ADGRA1Q86SQ6 560 aa18.19■□□□□ 0.5
CTNS-206ENST00000488623 FKBP1AP62942 108 aaKnown RBP18.18■□□□□ 0.5
CTNS-206ENST00000488623 NIM1KQ8IY84 436 aa18.18■□□□□ 0.5
CTNS-206ENST00000488623 C22orf23Q9BZE7 217 aa18.18■□□□□ 0.5
CTNS-206ENST00000488623 UPF2Q9HAU5 1272 aaKnown RBP18.18■□□□□ 0.5
CTNS-206ENST00000488623 ZNRF3Q9ULT6 936 aa18.18■□□□□ 0.5
CTNS-206ENST00000488623 ZNF646O15015 1829 aaPredicted RBP18.18■□□□□ 0.5
CTNS-206ENST00000488623 CCDC171Q6TFL3 1326 aa18.18■□□□□ 0.5
CTNS-206ENST00000488623 TMED8Q6PL24 325 aaPredicted RBP18.17■□□□□ 0.5
CTNS-206ENST00000488623 DZIP1Q86YF9 867 aaKnown RBP18.17■□□□□ 0.5
CTNS-206ENST00000488623 TBC1D32Q96NH3 1257 aa18.17■□□□□ 0.5
CTNS-206ENST00000488623 SUGT1Q9Y2Z0 365 aa18.17■□□□□ 0.5
CTNS-206ENST00000488623 GPAA1O43292 621 aa18.16■□□□□ 0.5
CTNS-206ENST00000488623 EPB41L2O43491 1005 aaKnown RBP18.16■□□□□ 0.5
CTNS-206ENST00000488623 MAP4K1Q92918 833 aa18.16■□□□□ 0.5
CTNS-206ENST00000488623 STRBPQ96SI9 672 aaKnown RBP18.16■□□□□ 0.5
CTNS-206ENST00000488623 RBM19Q9Y4C8 960 aaKnown RBP18.16■□□□□ 0.5
CTNS-206ENST00000488623 PSME4Q14997 1843 aa18.15■□□□□ 0.5
CTNS-206ENST00000488623 RAD17O75943 681 aa18.15■□□□□ 0.5
CTNS-206ENST00000488623 VIL1P09327 827 aaKnown RBP18.15■□□□□ 0.5
CTNS-206ENST00000488623 RBM25P49756 843 aaKnown RBP18.15■□□□□ 0.5
CTNS-206ENST00000488623 GSTO1P78417 241 aa18.15■□□□□ 0.5
CTNS-206ENST00000488623 VPS53Q5VIR6 699 aa18.15■□□□□ 0.5
CTNS-206ENST00000488623 C9orf131Q5VYM1 1079 aa18.15■□□□□ 0.5
CTNS-206ENST00000488623 MIGA1Q8NAN2 632 aa18.15■□□□□ 0.5
CTNS-206ENST00000488623 ARMT1Q9H993 441 aa18.15■□□□□ 0.5
CTNS-206ENST00000488623 MYH2Q9UKX2 1941 aa18.14■□□□□ 0.49
CTNS-206ENST00000488623 MAGEB6P1A0A0J9YX57 407 aa18.14■□□□□ 0.49
CTNS-206ENST00000488623 F8W031 263 aaPredicted RBP18.14■□□□□ 0.49
CTNS-206ENST00000488623 PSMD14O00487 310 aa18.14■□□□□ 0.49
CTNS-206ENST00000488623 FOXP2O15409 715 aa18.14■□□□□ 0.49
CTNS-206ENST00000488623 MBD4O95243 580 aa18.14■□□□□ 0.49
CTNS-206ENST00000488623 LDHCP07864 332 aa18.14■□□□□ 0.49
CTNS-206ENST00000488623 HSPD1P10809 573 aaKnown RBP18.14■□□□□ 0.49
CTNS-206ENST00000488623 DYNLL1P63167 89 aaKnown RBP18.14■□□□□ 0.49
CTNS-206ENST00000488623 CXCL9Q07325 125 aa18.14■□□□□ 0.49
CTNS-206ENST00000488623 DIXDC1Q155Q3 683 aa18.14■□□□□ 0.49
CTNS-206ENST00000488623 LCORLQ8N3X6 602 aa18.14■□□□□ 0.49
CTNS-206ENST00000488623 JDP2Q8WYK2 163 aa18.14■□□□□ 0.49
CTNS-206ENST00000488623 AIDAQ96BJ3 306 aa18.14■□□□□ 0.49
CTNS-206ENST00000488623 FAM163AQ96GL9 167 aaPredicted RBP18.14■□□□□ 0.49
CTNS-206ENST00000488623 MAST2Q6P0Q8 1798 aa18.14■□□□□ 0.49
CTNS-206ENST00000488623 RIOK1Q9BRS2 568 aaKnown RBP18.13■□□□□ 0.49
CTNS-206ENST00000488623 DSCC1Q9BVC3 393 aa18.13■□□□□ 0.49
CTNS-206ENST00000488623 TTF2Q9UNY4 1162 aaKnown RBP18.13■□□□□ 0.49
CTNS-206ENST00000488623 DICER1Q9UPY3 1922 aaKnown RBP18.13■□□□□ 0.49
CTNS-206ENST00000488623 TIAM2Q8IVF5 1701 aa18.12■□□□□ 0.49
CTNS-206ENST00000488623 PRKAB2O43741 272 aa18.12■□□□□ 0.49
CTNS-206ENST00000488623 HSPA4P34932 840 aa18.12■□□□□ 0.49
CTNS-206ENST00000488623 NECTIN1Q15223 517 aa18.12■□□□□ 0.49
CTNS-206ENST00000488623 RSBN1LQ6PCB5 846 aaPredicted RBP18.12■□□□□ 0.49
CTNS-206ENST00000488623 GMLQ99445 158 aa18.12■□□□□ 0.49
CTNS-206ENST00000488623 RNF181Q9P0P0 153 aa18.12■□□□□ 0.49
CTNS-206ENST00000488623 RBM8AQ9Y5S9 174 aaKnown RBP18.12■□□□□ 0.49
CTNS-206ENST00000488623 GPR75-ASB3A0A0A6YYF3 556 aa18.11■□□□□ 0.49
CTNS-206ENST00000488623 PATL2C9JE40 543 aaKnown RBP18.11■□□□□ 0.49
CTNS-206ENST00000488623 FZD9O00144 591 aa18.11■□□□□ 0.49
CTNS-206ENST00000488623 LMNB1P20700 586 aa18.11■□□□□ 0.49
CTNS-206ENST00000488623 SCNN1DP51172 638 aa18.11■□□□□ 0.49
CTNS-206ENST00000488623 PPP4CP60510 307 aa18.11■□□□□ 0.49
CTNS-206ENST00000488623 CIAPIN1Q6FI81 312 aa18.11■□□□□ 0.49
CTNS-206ENST00000488623 KIAA0825Q8IV33 1275 aa18.11■□□□□ 0.49
CTNS-206ENST00000488623 SLF2Q8IX21 1173 aa18.11■□□□□ 0.49
CTNS-206ENST00000488623 MRIQ9BWK5 157 aa18.11■□□□□ 0.49
CTNS-206ENST00000488623 AATFQ9NY61 560 aaKnown RBP eCLIP18.11■□□□□ 0.49
CTNS-206ENST00000488623 MROH7-TTC4A0A0A0MT08 1334 aa18.11■□□□□ 0.49
CTNS-206ENST00000488623 GAKO14976 1311 aa18.1■□□□□ 0.49
CTNS-206ENST00000488623 GSG1L2A8MUP6 293 aa18.1■□□□□ 0.49
CTNS-206ENST00000488623 KIF3CO14782 793 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms