RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 ARID4AP29374 1257 aaPredicted RBP18.47■□□□□ 0.55
CXCL12-207ENST00000488591 HTRA3P83110 453 aa18.47■□□□□ 0.55
CXCL12-207ENST00000488591 FMR1Q06787 632 aaKnown RBP eCLIP18.47■□□□□ 0.55
CXCL12-207ENST00000488591 AACSQ86V21 672 aa18.47■□□□□ 0.55
CXCL12-207ENST00000488591 APOBEC3FQ8IUX4 373 aaKnown RBP18.47■□□□□ 0.55
CXCL12-207ENST00000488591 SPATA5Q8NB90 893 aa18.47■□□□□ 0.55
CXCL12-207ENST00000488591 EAF2Q96CJ1 260 aaPredicted RBP18.47■□□□□ 0.55
CXCL12-207ENST00000488591 PRMT6Q96LA8 375 aaPredicted RBP18.47■□□□□ 0.55
CXCL12-207ENST00000488591 CCDC8Q9H0W5 538 aaPredicted RBP18.47■□□□□ 0.55
CXCL12-207ENST00000488591 ZNF408Q9H9D4 720 aa18.47■□□□□ 0.55
CXCL12-207ENST00000488591 IL1RAPL2Q9NP60 686 aa18.47■□□□□ 0.55
CXCL12-207ENST00000488591 TRPM7Q96QT4 1865 aa18.47■□□□□ 0.55
CXCL12-207ENST00000488591 COL1A1P02452 1464 aaPredicted RBP18.46■□□□□ 0.55
CXCL12-207ENST00000488591 GRIK5Q16478 980 aa18.46■□□□□ 0.55
CXCL12-207ENST00000488591 HMG20BQ9P0W2 317 aa18.46■□□□□ 0.55
CXCL12-207ENST00000488591 ABCF2Q9UG63 623 aa18.46■□□□□ 0.55
CXCL12-207ENST00000488591 ABT1Q9ULW3 272 aaKnown RBP18.46■□□□□ 0.55
CXCL12-207ENST00000488591 IFIT2P09913 472 aaKnown RBP18.45■□□□□ 0.54
CXCL12-207ENST00000488591 CST9Q5W186 159 aa18.45■□□□□ 0.54
CXCL12-207ENST00000488591 HHIPL2Q6UWX4 724 aa18.45■□□□□ 0.54
CXCL12-207ENST00000488591 ZNF512BQ96KM6 892 aaPredicted RBP18.45■□□□□ 0.54
CXCL12-207ENST00000488591 DBNLQ9UJU6 430 aaKnown RBP18.45■□□□□ 0.54
CXCL12-207ENST00000488591 PCDHAC2Q9Y5I4 1007 aa18.45■□□□□ 0.54
CXCL12-207ENST00000488591 PRDX5P30044 214 aa18.44■□□□□ 0.54
CXCL12-207ENST00000488591 ERICH6Q7L0X2 663 aa18.44■□□□□ 0.54
CXCL12-207ENST00000488591 SLF2Q8IX21 1173 aa18.44■□□□□ 0.54
CXCL12-207ENST00000488591 CDCA5Q96FF9 252 aa18.44■□□□□ 0.54
CXCL12-207ENST00000488591 ZDHHC15Q96MV8 337 aa18.44■□□□□ 0.54
CXCL12-207ENST00000488591 LRRCC1Q9C099 1032 aa18.44■□□□□ 0.54
CXCL12-207ENST00000488591 BCL11AQ9H165 835 aa18.44■□□□□ 0.54
CXCL12-207ENST00000488591 VEZTQ9HBM0 779 aa18.44■□□□□ 0.54
CXCL12-207ENST00000488591 PCDHB15Q9Y5E8 787 aa18.44■□□□□ 0.54
CXCL12-207ENST00000488591 CLRN2A0PK11 232 aa18.43■□□□□ 0.54
CXCL12-207ENST00000488591 MCAMP43121 646 aa18.43■□□□□ 0.54
CXCL12-207ENST00000488591 DZIP1Q86YF9 867 aaKnown RBP18.43■□□□□ 0.54
CXCL12-207ENST00000488591 DNAJC5GQ8N7S2 189 aa18.43■□□□□ 0.54
CXCL12-207ENST00000488591 C2orf69Q8N8R5 385 aa18.43■□□□□ 0.54
CXCL12-207ENST00000488591 DCTPP1Q9H773 170 aa18.43■□□□□ 0.54
CXCL12-207ENST00000488591 TDRD3Q9H7E2 651 aaKnown RBP18.43■□□□□ 0.54
CXCL12-207ENST00000488591 TLR7Q9NYK1 1049 aaKnown RBP18.43■□□□□ 0.54
CXCL12-207ENST00000488591 SCAF8Q9UPN6 1271 aaKnown RBP18.43■□□□□ 0.54
CXCL12-207ENST00000488591 ECM29Q5VYK3 1845 aa18.43■□□□□ 0.54
CXCL12-207ENST00000488591 NF2P35240 595 aa18.42■□□□□ 0.54
CXCL12-207ENST00000488591 TNFAIP1Q13829 316 aa18.42■□□□□ 0.54
CXCL12-207ENST00000488591 DEFB115Q30KQ5 88 aa18.42■□□□□ 0.54
CXCL12-207ENST00000488591 SPDYE2Q495Y8 402 aa18.42■□□□□ 0.54
CXCL12-207ENST00000488591 DLK2Q6UY11 383 aa18.42■□□□□ 0.54
CXCL12-207ENST00000488591 KLRG1Q96E93 195 aa18.42■□□□□ 0.54
CXCL12-207ENST00000488591 TMOD2Q9NZR1 351 aa18.42■□□□□ 0.54
CXCL12-207ENST00000488591 ZNF70Q9UC06 446 aaPredicted RBP18.42■□□□□ 0.54
CXCL12-207ENST00000488591 PPP2R3BQ9Y5P8 575 aa18.42■□□□□ 0.54
CXCL12-207ENST00000488591 PI16Q6UXB8 463 aa18.41■□□□□ 0.54
CXCL12-207ENST00000488591 DEFB129Q9H1M3 183 aa18.41■□□□□ 0.54
CXCL12-207ENST00000488591 GBA2Q9HCG7 927 aaPredicted RBP18.41■□□□□ 0.54
CXCL12-207ENST00000488591 SNRKQ9NRH2 765 aa18.41■□□□□ 0.54
CXCL12-207ENST00000488591 LRP2BPQ9P2M1 347 aa18.41■□□□□ 0.54
CXCL12-207ENST00000488591 MKRN1Q9UHC7 482 aaKnown RBP18.41■□□□□ 0.54
CXCL12-207ENST00000488591 TLL2Q9Y6L7 1015 aa18.41■□□□□ 0.54
CXCL12-207ENST00000488591 TNNI2P48788 182 aa18.4■□□□□ 0.54
CXCL12-207ENST00000488591 GSTO1P78417 241 aa18.4■□□□□ 0.54
CXCL12-207ENST00000488591 DIXDC1Q155Q3 683 aa18.4■□□□□ 0.54
CXCL12-207ENST00000488591 TBC1D9Q6ZT07 1266 aa18.4■□□□□ 0.54
CXCL12-207ENST00000488591 RAI14Q9P0K7 980 aa18.4■□□□□ 0.54
CXCL12-207ENST00000488591 IGSF3O75054 1194 aa18.39■□□□□ 0.53
CXCL12-207ENST00000488591 LDHCP07864 332 aa18.39■□□□□ 0.53
CXCL12-207ENST00000488591 PRAMEF18Q5VWM3 479 aa18.39■□□□□ 0.53
CXCL12-207ENST00000488591 APOBEC3HQ6NTF7 200 aaKnown RBP18.39■□□□□ 0.53
CXCL12-207ENST00000488591 SAPCD2Q86UD0 394 aa18.39■□□□□ 0.53
CXCL12-207ENST00000488591 DAGLAQ9Y4D2 1042 aa18.39■□□□□ 0.53
CXCL12-207ENST00000488591 CNTNAP1P78357 1384 aa18.39■□□□□ 0.53
CXCL12-207ENST00000488591 RASSF10A6NK89 507 aa18.38■□□□□ 0.53
CXCL12-207ENST00000488591 ZAP70P43403 619 aa18.38■□□□□ 0.53
CXCL12-207ENST00000488591 FKBP1BP68106 108 aa18.38■□□□□ 0.53
CXCL12-207ENST00000488591 MECOMQ03112 1051 aa18.38■□□□□ 0.53
CXCL12-207ENST00000488591 SUPT20HL1Q3ZLR7 823 aa18.38■□□□□ 0.53
CXCL12-207ENST00000488591 PAXIP1Q6ZW49 1069 aaPredicted RBP18.38■□□□□ 0.53
CXCL12-207ENST00000488591 EXOC6Q8TAG9 804 aa18.38■□□□□ 0.53
CXCL12-207ENST00000488591 ZBTB47Q9UFB7 747 aaPredicted RBP18.38■□□□□ 0.53
CXCL12-207ENST00000488591 AOX1Q06278 1338 aa18.38■□□□□ 0.53
CXCL12-207ENST00000488591 TCP10L2B9ZVM9 353 aa18.37■□□□□ 0.53
CXCL12-207ENST00000488591 ECE1P42892 770 aa18.37■□□□□ 0.53
CXCL12-207ENST00000488591 HUNKP57058 714 aa18.37■□□□□ 0.53
CXCL12-207ENST00000488591 TTLL12Q14166 644 aaPredicted RBP18.37■□□□□ 0.53
CXCL12-207ENST00000488591 RASA3Q14644 834 aa18.37■□□□□ 0.53
CXCL12-207ENST00000488591 FAM163AQ96GL9 167 aaPredicted RBP18.37■□□□□ 0.53
CXCL12-207ENST00000488591 HHIPL1Q96JK4 782 aa18.37■□□□□ 0.53
CXCL12-207ENST00000488591 SMARCA5O60264 1052 aaPredicted RBP18.36■□□□□ 0.53
CXCL12-207ENST00000488591 CYP2E1P05181 493 aaPredicted RBP18.36■□□□□ 0.53
CXCL12-207ENST00000488591 HDAC1Q13547 482 aaPredicted RBP18.36■□□□□ 0.53
CXCL12-207ENST00000488591 FKBP1CQ5VVH2 108 aa18.36■□□□□ 0.53
CXCL12-207ENST00000488591 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.36■□□□□ 0.53
CXCL12-207ENST00000488591 RWDD1Q9H446 243 aaPredicted RBP18.36■□□□□ 0.53
CXCL12-207ENST00000488591 USP40Q9NVE5 1235 aa18.36■□□□□ 0.53
CXCL12-207ENST00000488591 AKAP11Q9UKA4 1901 aa18.36■□□□□ 0.53
CXCL12-207ENST00000488591 MYH2Q9UKX2 1941 aa18.36■□□□□ 0.53
CXCL12-207ENST00000488591 MROH7-TTC4A0A0A0MT08 1334 aa18.35■□□□□ 0.53
CXCL12-207ENST00000488591 GAKO14976 1311 aa18.35■□□□□ 0.53
CXCL12-207ENST00000488591 CACNB3P54284 484 aa18.35■□□□□ 0.53
CXCL12-207ENST00000488591 TTF1Q15361 905 aaPredicted RBP18.35■□□□□ 0.53
CXCL12-207ENST00000488591 CDC42EP5Q6NZY7 148 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms