RNA–Protein interactions for RNA: ENST00000488558.2

CUL4A-209, Transcript of cullin 4A, humanhuman

TSL 3 BASIC

Gene CUL4A, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-209ENST00000488558 CEP126Q9P2H0 1117 aa28.78■■■□□ 2.2
CUL4A-209ENST00000488558 MAST3O60307 1309 aa28.77■■■□□ 2.2
CUL4A-209ENST00000488558 BCAR3O75815 825 aa28.77■■■□□ 2.2
CUL4A-209ENST00000488558 SUPT20HL1Q3ZLR7 823 aa28.77■■■□□ 2.2
CUL4A-209ENST00000488558 UNCXA6NJT0 531 aa28.76■■■□□ 2.19
CUL4A-209ENST00000488558 ATP2B3Q16720 1220 aa28.76■■■□□ 2.19
CUL4A-209ENST00000488558 DZIP1LQ8IYY4 767 aaKnown RBP28.76■■■□□ 2.19
CUL4A-209ENST00000488558 MRIQ9BWK5 157 aa28.76■■■□□ 2.19
CUL4A-209ENST00000488558 RNF186Q9NXI6 227 aa28.76■■■□□ 2.19
CUL4A-209ENST00000488558 ZNF70Q9UC06 446 aaPredicted RBP28.76■■■□□ 2.19
CUL4A-209ENST00000488558 ANGEL1Q9UNK9 670 aaKnown RBP28.76■■■□□ 2.19
CUL4A-209ENST00000488558 CASP8AP2Q9UKL3 1982 aa28.75■■■□□ 2.19
CUL4A-209ENST00000488558 ZBTB22O15209 634 aa28.75■■■□□ 2.19
CUL4A-209ENST00000488558 PPP1R12BO60237 982 aaPredicted RBP28.75■■■□□ 2.19
CUL4A-209ENST00000488558 GRIK5Q16478 980 aa28.75■■■□□ 2.19
CUL4A-209ENST00000488558 FRAT1Q92837 279 aaPredicted RBP28.75■■■□□ 2.19
CUL4A-209ENST00000488558 RASA3Q14644 834 aa28.74■■■□□ 2.19
CUL4A-209ENST00000488558 TEKT1Q969V4 418 aa28.74■■■□□ 2.19
CUL4A-209ENST00000488558 PRKG1Q13976 671 aa28.73■■■□□ 2.19
CUL4A-209ENST00000488558 WDR66Q8TBY9 1149 aa28.73■■■□□ 2.19
CUL4A-209ENST00000488558 TDRD3Q9H7E2 651 aaKnown RBP28.73■■■□□ 2.19
CUL4A-209ENST00000488558 PA2G4Q9UQ80 394 aaKnown RBP28.73■■■□□ 2.19
CUL4A-209ENST00000488558 ZBED9Q6R2W3 1325 aa28.72■■■□□ 2.19
CUL4A-209ENST00000488558 TRPA1O75762 1119 aa28.72■■■□□ 2.19
CUL4A-209ENST00000488558 ZKSCAN2Q63HK3 967 aa28.72■■■□□ 2.19
CUL4A-209ENST00000488558 SRGAP3O43295 1099 aa28.71■■■□□ 2.19
CUL4A-209ENST00000488558 NBPF12Q5TAG4 269 aaPredicted RBP28.71■■■□□ 2.19
CUL4A-209ENST00000488558 ABHD8Q96I13 439 aa28.71■■■□□ 2.19
CUL4A-209ENST00000488558 ZDHHC15Q96MV8 337 aa28.71■■■□□ 2.19
CUL4A-209ENST00000488558 GNL3LQ9NVN8 582 aaKnown RBP28.71■■■□□ 2.19
CUL4A-209ENST00000488558 TNNQ9UQP3 1299 aa28.71■■■□□ 2.19
CUL4A-209ENST00000488558 OTOFQ9HC10 1997 aa28.71■■■□□ 2.19
CUL4A-209ENST00000488558 SEMA3EO15041 775 aa28.7■■■□□ 2.18
CUL4A-209ENST00000488558 GNAI2P04899 355 aa28.7■■■□□ 2.18
CUL4A-209ENST00000488558 TM4SF4P48230 202 aa28.7■■■□□ 2.18
CUL4A-209ENST00000488558 TNNI2P48788 182 aa28.7■■■□□ 2.18
CUL4A-209ENST00000488558 SREBF2Q12772 1141 aa28.69■■■□□ 2.18
CUL4A-209ENST00000488558 SPRYD7Q5W111 196 aa28.69■■■□□ 2.18
CUL4A-209ENST00000488558 HHIPL2Q6UWX4 724 aa28.69■■■□□ 2.18
CUL4A-209ENST00000488558 IREB2P48200 963 aaKnown RBP28.68■■■□□ 2.18
CUL4A-209ENST00000488558 CLUAP1Q96AJ1 413 aa28.68■■■□□ 2.18
CUL4A-209ENST00000488558 TEPSINQ96N21 525 aa28.68■■■□□ 2.18
CUL4A-209ENST00000488558 FZD1Q9UP38 647 aa28.68■■■□□ 2.18
CUL4A-209ENST00000488558 SALL1Q9NSC2 1324 aa28.68■■■□□ 2.18
CUL4A-209ENST00000488558 ZBTB48P10074 688 aaPredicted RBP28.67■■■□□ 2.18
CUL4A-209ENST00000488558 FKBP1CQ5VVH2 108 aa28.67■■■□□ 2.18
CUL4A-209ENST00000488558 TMEM57Q8N5G2 664 aa28.66■■■□□ 2.18
CUL4A-209ENST00000488558 DENND2AQ9ULE3 1009 aa28.66■■■□□ 2.18
CUL4A-209ENST00000488558 TCP10L2B9ZVM9 353 aa28.65■■■□□ 2.18
CUL4A-209ENST00000488558 APOBEC3HQ6NTF7 200 aaKnown RBP28.65■■■□□ 2.18
CUL4A-209ENST00000488558 ANKRD13AQ8IZ07 590 aa28.65■■■□□ 2.18
CUL4A-209ENST00000488558 SLC10A4Q96EP9 437 aa28.65■■■□□ 2.18
CUL4A-209ENST00000488558 TMOD2Q9NZR1 351 aa28.65■■■□□ 2.18
CUL4A-209ENST00000488558 AKAP2Q9Y2D5 859 aa28.65■■■□□ 2.18
CUL4A-209ENST00000488558 PDS5AQ29RF7 1337 aaKnown RBP28.65■■■□□ 2.18
CUL4A-209ENST00000488558 RPAP1Q9BWH6 1393 aaPredicted RBP28.64■■■□□ 2.18
CUL4A-209ENST00000488558 USP2O75604 605 aaPredicted RBP28.64■■■□□ 2.18
CUL4A-209ENST00000488558 PHKA1P46020 1223 aa28.64■■■□□ 2.18
CUL4A-209ENST00000488558 FAM83AQ86UY5 434 aa28.64■■■□□ 2.18
CUL4A-209ENST00000488558 MKRN3Q13064 507 aaKnown RBP28.63■■■□□ 2.17
CUL4A-209ENST00000488558 CCDC102BQ68D86 513 aa28.63■■■□□ 2.17
CUL4A-209ENST00000488558 WNK4Q96J92 1243 aa28.63■■■□□ 2.17
CUL4A-209ENST00000488558 CLMNQ96JQ2 1002 aa28.63■■■□□ 2.17
CUL4A-209ENST00000488558 CFHR5Q9BXR6 569 aa28.63■■■□□ 2.17
CUL4A-209ENST00000488558 MCOLN1Q9GZU1 580 aa28.63■■■□□ 2.17
CUL4A-209ENST00000488558 TMEM39BQ9GZU3 492 aa28.63■■■□□ 2.17
CUL4A-209ENST00000488558 MANSC4A6NHS7 340 aaPredicted RBP28.62■■■□□ 2.17
CUL4A-209ENST00000488558 INHBEP58166 350 aa28.62■■■□□ 2.17
CUL4A-209ENST00000488558 NOM1Q5C9Z4 860 aaKnown RBP28.62■■■□□ 2.17
CUL4A-209ENST00000488558 ADORA1P30542 326 aa28.61■■■□□ 2.17
CUL4A-209ENST00000488558 TFCP2Q12800 502 aa28.61■■■□□ 2.17
CUL4A-209ENST00000488558 CDAN1Q8IWY9 1227 aa28.61■■■□□ 2.17
CUL4A-209ENST00000488558 A0A1B0GUL7 405 aa28.6■■■□□ 2.17
CUL4A-209ENST00000488558 LDHBP07195 334 aaKnown RBP28.6■■■□□ 2.17
CUL4A-209ENST00000488558 PRDX5P30044 214 aa28.6■■■□□ 2.17
CUL4A-209ENST00000488558 DGKZQ13574 1117 aa28.6■■■□□ 2.17
CUL4A-209ENST00000488558 FTSJ3Q8IY81 847 aaKnown RBP28.6■■■□□ 2.17
CUL4A-209ENST00000488558 ZGPATQ8N5A5 531 aaKnown RBP28.6■■■□□ 2.17
CUL4A-209ENST00000488558 PNMA6EA0A0J9YXQ4 647 aa28.59■■■□□ 2.17
CUL4A-209ENST00000488558 ALDH1A1P00352 501 aa28.59■■■□□ 2.17
CUL4A-209ENST00000488558 CACNB3P54284 484 aa28.59■■■□□ 2.17
CUL4A-209ENST00000488558 TIMM10P62072 90 aa28.59■■■□□ 2.17
CUL4A-209ENST00000488558 MVPQ14764 893 aaKnown RBP28.59■■■□□ 2.17
CUL4A-209ENST00000488558 HOOK2Q96ED9 719 aa28.59■■■□□ 2.17
CUL4A-209ENST00000488558 DAGLAQ9Y4D2 1042 aa28.59■■■□□ 2.17
CUL4A-209ENST00000488558 XAGE2Q96GT9 111 aa28.58■■■□□ 2.17
CUL4A-209ENST00000488558 RASGRF1Q13972 1273 aa28.57■■■□□ 2.16
CUL4A-209ENST00000488558 DIXDC1Q155Q3 683 aa28.56■■■□□ 2.16
CUL4A-209ENST00000488558 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.56■■■□□ 2.16
CUL4A-209ENST00000488558 MYH2Q9UKX2 1941 aa28.56■■■□□ 2.16
CUL4A-209ENST00000488558 TBC1D8O95759 1140 aa28.55■■■□□ 2.16
CUL4A-209ENST00000488558 G3BP1Q13283 466 aaKnown RBP eCLIP28.55■■■□□ 2.16
CUL4A-209ENST00000488558 POLA2Q14181 598 aa28.55■■■□□ 2.16
CUL4A-209ENST00000488558 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.55■■■□□ 2.16
CUL4A-209ENST00000488558 GJA5P36382 358 aa28.54■■■□□ 2.16
CUL4A-209ENST00000488558 CTU1Q7Z7A3 348 aaKnown RBP28.54■■■□□ 2.16
CUL4A-209ENST00000488558 IFNL1Q8IU54 200 aa28.54■■■□□ 2.16
CUL4A-209ENST00000488558 SSH3Q8TE77 659 aa28.54■■■□□ 2.16
CUL4A-209ENST00000488558 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.54■■■□□ 2.16
CUL4A-209ENST00000488558 GAKO14976 1311 aa28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms