RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 LCORLQ8N3X6 602 aa24■■□□□ 1.43
NECAB3-213ENST00000488489 NECAB1Q8N987 351 aa24■■□□□ 1.43
NECAB3-213ENST00000488489 HMGB1P09429 215 aaKnown RBP23.99■■□□□ 1.43
NECAB3-213ENST00000488489 NBPF3Q9H094 633 aa23.99■■□□□ 1.43
NECAB3-213ENST00000488489 EPB41L4AQ9HCS5 686 aaPredicted RBP23.99■■□□□ 1.43
NECAB3-213ENST00000488489 JAG2Q9Y219 1238 aa23.99■■□□□ 1.43
NECAB3-213ENST00000488489 PATL2C9JE40 543 aaKnown RBP23.99■■□□□ 1.43
NECAB3-213ENST00000488489 DTNBO60941 627 aa23.99■■□□□ 1.43
NECAB3-213ENST00000488489 ZNF213O14771 459 aa23.98■■□□□ 1.43
NECAB3-213ENST00000488489 PRKAB2O43741 272 aa23.98■■□□□ 1.43
NECAB3-213ENST00000488489 CHAF1AQ13111 956 aaPredicted RBP23.98■■□□□ 1.43
NECAB3-213ENST00000488489 FSD2A1L4K1 749 aa23.98■■□□□ 1.43
NECAB3-213ENST00000488489 GSG1L2A8MUP6 293 aa23.98■■□□□ 1.43
NECAB3-213ENST00000488489 UFL1O94874 794 aa23.98■■□□□ 1.43
NECAB3-213ENST00000488489 C15orf52Q6ZUT6 534 aaKnown RBP23.98■■□□□ 1.43
NECAB3-213ENST00000488489 DEFB132Q7Z7B7 95 aa23.98■■□□□ 1.43
NECAB3-213ENST00000488489 ZBTB22O15209 634 aa23.97■■□□□ 1.43
NECAB3-213ENST00000488489 CHST3Q7LGC8 479 aa23.97■■□□□ 1.43
NECAB3-213ENST00000488489 IFNL3Q8IZI9 196 aa23.97■■□□□ 1.43
NECAB3-213ENST00000488489 STK32BQ9NY57 414 aa23.97■■□□□ 1.43
NECAB3-213ENST00000488489 PODXL2Q9NZ53 605 aa23.97■■□□□ 1.43
NECAB3-213ENST00000488489 POLLQ9UGP5 575 aa23.97■■□□□ 1.43
NECAB3-213ENST00000488489 ALX1Q15699 326 aa23.96■■□□□ 1.43
NECAB3-213ENST00000488489 TDRD7Q8NHU6 1098 aaKnown RBP23.96■■□□□ 1.43
NECAB3-213ENST00000488489 GGA1Q9UJY5 639 aa23.96■■□□□ 1.43
NECAB3-213ENST00000488489 PPEF1O14829 653 aaPredicted RBP23.96■■□□□ 1.43
NECAB3-213ENST00000488489 ATP2B4P23634 1241 aa23.96■■□□□ 1.43
NECAB3-213ENST00000488489 PRDX5P30044 214 aa23.96■■□□□ 1.43
NECAB3-213ENST00000488489 BRF1Q92994 677 aa23.96■■□□□ 1.43
NECAB3-213ENST00000488489 NSUN4Q96CB9 384 aaKnown RBP23.96■■□□□ 1.43
NECAB3-213ENST00000488489 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.96■■□□□ 1.43
NECAB3-213ENST00000488489 NPR1P16066 1061 aa23.95■■□□□ 1.42
NECAB3-213ENST00000488489 PDE6BP35913 854 aa23.95■■□□□ 1.42
NECAB3-213ENST00000488489 TBC1D16Q8TBP0 767 aa23.95■■□□□ 1.42
NECAB3-213ENST00000488489 LRRC37AA6NMS7 1700 aa23.95■■□□□ 1.42
NECAB3-213ENST00000488489 COL11A2P13942 1736 aaPredicted RBP23.95■■□□□ 1.42
NECAB3-213ENST00000488489 GOLGA6L3A6NEY3 463 aa23.95■■□□□ 1.42
NECAB3-213ENST00000488489 DDX11L8A8MPP1 907 aa23.95■■□□□ 1.42
NECAB3-213ENST00000488489 MECOMQ03112 1051 aa23.95■■□□□ 1.42
NECAB3-213ENST00000488489 CLEC17AQ6ZS10 378 aa23.95■■□□□ 1.42
NECAB3-213ENST00000488489 TBC1D10CQ8IV04 446 aa23.95■■□□□ 1.42
NECAB3-213ENST00000488489 SP8Q8IXZ3 490 aa23.95■■□□□ 1.42
NECAB3-213ENST00000488489 RIOK1Q9BRS2 568 aaKnown RBP23.95■■□□□ 1.42
NECAB3-213ENST00000488489 AGXT2Q9BYV1 514 aa23.95■■□□□ 1.42
NECAB3-213ENST00000488489 PDGFDQ9GZP0 370 aaPredicted RBP23.95■■□□□ 1.42
NECAB3-213ENST00000488489 SLC4A4Q9Y6R1 1079 aa23.95■■□□□ 1.42
NECAB3-213ENST00000488489 TRAK2O60296 914 aa23.94■■□□□ 1.42
NECAB3-213ENST00000488489 NAA16Q6N069 864 aaPredicted RBP23.94■■□□□ 1.42
NECAB3-213ENST00000488489 OLFM4Q6UX06 510 aa23.94■■□□□ 1.42
NECAB3-213ENST00000488489 NKX2-3Q8TAU0 364 aa23.94■■□□□ 1.42
NECAB3-213ENST00000488489 LTBP1Q14766 1721 aa23.94■■□□□ 1.42
NECAB3-213ENST00000488489 ZMYM6O95789 1325 aa23.94■■□□□ 1.42
NECAB3-213ENST00000488489 STK3Q13188 491 aa23.93■■□□□ 1.42
NECAB3-213ENST00000488489 ZNF804AQ7Z570 1209 aa23.93■■□□□ 1.42
NECAB3-213ENST00000488489 ATP6V0A2Q9Y487 856 aa23.93■■□□□ 1.42
NECAB3-213ENST00000488489 MAGEB6P1A0A0J9YX57 407 aa23.93■■□□□ 1.42
NECAB3-213ENST00000488489 BRD1O95696 1058 aa23.93■■□□□ 1.42
NECAB3-213ENST00000488489 GNAT2P19087 354 aa23.93■■□□□ 1.42
NECAB3-213ENST00000488489 TMC4Q7Z404 712 aa23.93■■□□□ 1.42
NECAB3-213ENST00000488489 MB21D2Q8IYB1 491 aaPredicted RBP23.93■■□□□ 1.42
NECAB3-213ENST00000488489 GBP4Q96PP9 640 aa23.93■■□□□ 1.42
NECAB3-213ENST00000488489 NAPBQ9H115 298 aa23.93■■□□□ 1.42
NECAB3-213ENST00000488489 SMC3Q9UQE7 1217 aa23.93■■□□□ 1.42
NECAB3-213ENST00000488489 FOXD4L5Q5VV16 416 aaPredicted RBP23.92■■□□□ 1.42
NECAB3-213ENST00000488489 FOXD4L4Q8WXT5 416 aaPredicted RBP23.92■■□□□ 1.42
NECAB3-213ENST00000488489 BAG4O95429 457 aaKnown RBP23.92■■□□□ 1.42
NECAB3-213ENST00000488489 BAG6P46379 1132 aa23.92■■□□□ 1.42
NECAB3-213ENST00000488489 DYNLL1P63167 89 aaKnown RBP23.92■■□□□ 1.42
NECAB3-213ENST00000488489 FGD1P98174 961 aa23.92■■□□□ 1.42
NECAB3-213ENST00000488489 CD209Q9NNX6 404 aa23.92■■□□□ 1.42
NECAB3-213ENST00000488489 SF3B2Q13435 895 aaKnown RBP23.91■■□□□ 1.42
NECAB3-213ENST00000488489 NCOA7Q8NI08 942 aa23.91■■□□□ 1.42
NECAB3-213ENST00000488489 SDR42E1Q8WUS8 393 aa23.91■■□□□ 1.42
NECAB3-213ENST00000488489 MASTLQ96GX5 879 aa23.91■■□□□ 1.42
NECAB3-213ENST00000488489 GPHNQ9NQX3 736 aaPredicted RBP23.91■■□□□ 1.42
NECAB3-213ENST00000488489 GJB2P29033 226 aa23.9■■□□□ 1.42
NECAB3-213ENST00000488489 ALDH1B1P30837 517 aa23.9■■□□□ 1.42
NECAB3-213ENST00000488489 ANTXR2P58335 489 aa23.9■■□□□ 1.42
NECAB3-213ENST00000488489 APOBRQ0VD83 1088 aa23.9■■□□□ 1.42
NECAB3-213ENST00000488489 INCENPQ9NQS7 918 aa23.9■■□□□ 1.42
NECAB3-213ENST00000488489 QSER1Q2KHR3 1735 aa23.9■■□□□ 1.42
NECAB3-213ENST00000488489 C6orf229H3BNL8 230 aa23.9■■□□□ 1.42
NECAB3-213ENST00000488489 XRCC6P12956 609 aaKnown RBP eCLIP23.9■■□□□ 1.42
NECAB3-213ENST00000488489 TACC3Q9Y6A5 838 aa23.9■■□□□ 1.42
NECAB3-213ENST00000488489 SALL1Q9NSC2 1324 aa23.9■■□□□ 1.42
NECAB3-213ENST00000488489 GRIK5Q16478 980 aa23.89■■□□□ 1.42
NECAB3-213ENST00000488489 FBXL16Q8N461 479 aa23.89■■□□□ 1.42
NECAB3-213ENST00000488489 WDR66Q8TBY9 1149 aa23.89■■□□□ 1.42
NECAB3-213ENST00000488489 GTF3C6Q969F1 213 aa23.89■■□□□ 1.42
NECAB3-213ENST00000488489 PRC1O43663 620 aa23.89■■□□□ 1.41
NECAB3-213ENST00000488489 IL1R1P14778 569 aa23.89■■□□□ 1.41
NECAB3-213ENST00000488489 MCM5P33992 734 aa23.89■■□□□ 1.41
NECAB3-213ENST00000488489 CTDSPL2Q05D32 466 aa23.89■■□□□ 1.41
NECAB3-213ENST00000488489 CHAMP1Q96JM3 812 aa23.89■■□□□ 1.41
NECAB3-213ENST00000488489 NACAP1Q9BZK3 213 aa23.89■■□□□ 1.41
NECAB3-213ENST00000488489 CCDC88AQ3V6T2 1871 aa23.88■■□□□ 1.41
NECAB3-213ENST00000488489 SYT1P21579 422 aa23.88■■□□□ 1.41
NECAB3-213ENST00000488489 TDO2P48775 406 aa23.88■■□□□ 1.41
NECAB3-213ENST00000488489 RALYLQ86SE5 291 aaKnown RBP23.88■■□□□ 1.41
NECAB3-213ENST00000488489 ZNF622Q969S3 477 aaKnown RBP eCLIP23.88■■□□□ 1.411e-6■■□□□ 14.2
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms