RNA–Protein interactions for RNA: ENST00000488193.5

TFAP2A-215, Transcript of transcription factor AP-2 alpha, humanhuman

TSL 1 (best)

Gene TFAP2A, Length 1,894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2A-215ENST00000488193 AIDAQ96BJ3 306 aa17.2■□□□□ 0.34
TFAP2A-215ENST00000488193 ATP6V0A2Q9Y487 856 aa17.2■□□□□ 0.34
TFAP2A-215ENST00000488193 DUOX1Q9NRD9 1551 aa17.2■□□□□ 0.34
TFAP2A-215ENST00000488193 GSG1L2A8MUP6 293 aa17.19■□□□□ 0.34
TFAP2A-215ENST00000488193 UFL1O94874 794 aa17.19■□□□□ 0.34
TFAP2A-215ENST00000488193 HAND2P61296 217 aa17.19■□□□□ 0.34
TFAP2A-215ENST00000488193 OLFM4Q6UX06 510 aa17.19■□□□□ 0.34
TFAP2A-215ENST00000488193 NKX2-3Q8TAU0 364 aa17.19■□□□□ 0.34
TFAP2A-215ENST00000488193 TNPO1Q92973 898 aaKnown RBP17.19■□□□□ 0.34
TFAP2A-215ENST00000488193 RAI14Q9P0K7 980 aa17.19■□□□□ 0.34
TFAP2A-215ENST00000488193 ZDHHC9Q9Y397 364 aa17.19■□□□□ 0.34
TFAP2A-215ENST00000488193 PATL2C9JE40 543 aaKnown RBP17.18■□□□□ 0.34
TFAP2A-215ENST00000488193 TMC4Q7Z404 712 aa17.18■□□□□ 0.34
TFAP2A-215ENST00000488193 MIGA1Q8NAN2 632 aa17.18■□□□□ 0.34
TFAP2A-215ENST00000488193 NSUN4Q96CB9 384 aaKnown RBP17.18■□□□□ 0.34
TFAP2A-215ENST00000488193 RIOK1Q9BRS2 568 aaKnown RBP17.18■□□□□ 0.34
TFAP2A-215ENST00000488193 GGA1Q9UJY5 639 aa17.18■□□□□ 0.34
TFAP2A-215ENST00000488193 JAG2Q9Y219 1238 aa17.18■□□□□ 0.34
TFAP2A-215ENST00000488193 CHAF1AQ13111 956 aaPredicted RBP17.18■□□□□ 0.34
TFAP2A-215ENST00000488193 IMMTQ16891 758 aaKnown RBP17.18■□□□□ 0.34
TFAP2A-215ENST00000488193 DHX32Q7L7V1 743 aaKnown RBP17.18■□□□□ 0.34
TFAP2A-215ENST00000488193 PRDX5P30044 214 aa17.17■□□□□ 0.34
TFAP2A-215ENST00000488193 MECOMQ03112 1051 aa17.17■□□□□ 0.34
TFAP2A-215ENST00000488193 GRIK5Q16478 980 aa17.17■□□□□ 0.34
TFAP2A-215ENST00000488193 IFNL3Q8IZI9 196 aa17.17■□□□□ 0.34
TFAP2A-215ENST00000488193 MASTLQ96GX5 879 aa17.17■□□□□ 0.34
TFAP2A-215ENST00000488193 ZSCAN31Q96LW9 406 aaPredicted RBP17.17■□□□□ 0.34
TFAP2A-215ENST00000488193 AGXT2Q9BYV1 514 aa17.17■□□□□ 0.34
TFAP2A-215ENST00000488193 ZMYM6O95789 1325 aa17.17■□□□□ 0.34
TFAP2A-215ENST00000488193 CHD4Q14839 1912 aa17.17■□□□□ 0.34
TFAP2A-215ENST00000488193 MAST2Q6P0Q8 1798 aa17.16■□□□□ 0.34
TFAP2A-215ENST00000488193 SALL1Q9NSC2 1324 aa17.16■□□□□ 0.34
TFAP2A-215ENST00000488193 IL1R1P14778 569 aa17.16■□□□□ 0.34
TFAP2A-215ENST00000488193 SF3B2Q13435 895 aaKnown RBP17.16■□□□□ 0.34
TFAP2A-215ENST00000488193 Q6ZUG5 572 aa17.16■□□□□ 0.34
TFAP2A-215ENST00000488193 TBC1D10CQ8IV04 446 aa17.16■□□□□ 0.34
TFAP2A-215ENST00000488193 LRRC2Q9BYS8 371 aa17.16■□□□□ 0.34
TFAP2A-215ENST00000488193 CD209Q9NNX6 404 aa17.16■□□□□ 0.34
TFAP2A-215ENST00000488193 TACC3Q9Y6A5 838 aa17.16■□□□□ 0.34
TFAP2A-215ENST00000488193 CCDC88AQ3V6T2 1871 aa17.16■□□□□ 0.34
TFAP2A-215ENST00000488193 ALDH1B1P30837 517 aa17.16■□□□□ 0.34
TFAP2A-215ENST00000488193 DYNLL1P63167 89 aaKnown RBP17.16■□□□□ 0.34
TFAP2A-215ENST00000488193 ZNF804AQ7Z570 1209 aa17.16■□□□□ 0.34
TFAP2A-215ENST00000488193 NECAB1Q8N987 351 aa17.16■□□□□ 0.34
TFAP2A-215ENST00000488193 SH2B1Q9NRF2 756 aaPredicted RBP17.16■□□□□ 0.34
TFAP2A-215ENST00000488193 SLX4Q8IY92 1834 aa17.15■□□□□ 0.34
TFAP2A-215ENST00000488193 KIAA1551Q9HCM1 1747 aa17.15■□□□□ 0.34
TFAP2A-215ENST00000488193 ZNF213O14771 459 aa17.15■□□□□ 0.34
TFAP2A-215ENST00000488193 DTNBO60941 627 aa17.15■□□□□ 0.34
TFAP2A-215ENST00000488193 APPP05067 770 aa17.15■□□□□ 0.34
TFAP2A-215ENST00000488193 HMGB1P09429 215 aaKnown RBP17.15■□□□□ 0.34
TFAP2A-215ENST00000488193 ANKRD1Q15327 319 aa17.15■□□□□ 0.34
TFAP2A-215ENST00000488193 NAA16Q6N069 864 aaPredicted RBP17.15■□□□□ 0.34
TFAP2A-215ENST00000488193 C2CD5Q86YS7 1000 aa17.15■□□□□ 0.34
TFAP2A-215ENST00000488193 MB21D2Q8IYB1 491 aaPredicted RBP17.15■□□□□ 0.34
TFAP2A-215ENST00000488193 CCDC83Q8IWF9 413 aa17.14■□□□□ 0.33
TFAP2A-215ENST00000488193 SLC4A4Q9Y6R1 1079 aa17.14■□□□□ 0.33
TFAP2A-215ENST00000488193 MAGEB6P1A0A0J9YX57 407 aa17.14■□□□□ 0.33
TFAP2A-215ENST00000488193 GNAT2P19087 354 aa17.14■□□□□ 0.33
TFAP2A-215ENST00000488193 CHRNA5P30532 468 aa17.14■□□□□ 0.33
TFAP2A-215ENST00000488193 ANTXR2P58335 489 aa17.14■□□□□ 0.33
TFAP2A-215ENST00000488193 NUCB2P80303 420 aa17.14■□□□□ 0.33
TFAP2A-215ENST00000488193 STYK1Q6J9G0 422 aa17.14■□□□□ 0.33
TFAP2A-215ENST00000488193 CHST3Q7LGC8 479 aa17.14■□□□□ 0.33
TFAP2A-215ENST00000488193 MCM4P33991 863 aa17.13■□□□□ 0.33
TFAP2A-215ENST00000488193 CLEC17AQ6ZS10 378 aa17.13■□□□□ 0.33
TFAP2A-215ENST00000488193 FBXL16Q8N461 479 aa17.13■□□□□ 0.33
TFAP2A-215ENST00000488193 WDR66Q8TBY9 1149 aa17.13■□□□□ 0.33
TFAP2A-215ENST00000488193 INCENPQ9NQS7 918 aa17.13■□□□□ 0.33
TFAP2A-215ENST00000488193 GPHNQ9NQX3 736 aaPredicted RBP17.13■□□□□ 0.33
TFAP2A-215ENST00000488193 TIAM2Q8IVF5 1701 aa17.13■□□□□ 0.33
TFAP2A-215ENST00000488193 C6orf229H3BNL8 230 aa17.12■□□□□ 0.33
TFAP2A-215ENST00000488193 SDR42E1Q8WUS8 393 aa17.12■□□□□ 0.33
TFAP2A-215ENST00000488193 BRF1Q92994 677 aa17.12■□□□□ 0.33
TFAP2A-215ENST00000488193 ZNF622Q969S3 477 aaKnown RBP eCLIP17.12■□□□□ 0.33
TFAP2A-215ENST00000488193 MPNDQ8N594 471 aa17.12■□□□□ 0.33
TFAP2A-215ENST00000488193 BAZ2AQ9UIF9 1905 aaKnown RBP17.11■□□□□ 0.33
TFAP2A-215ENST00000488193 H0YIN7 160 aa17.11■□□□□ 0.33
TFAP2A-215ENST00000488193 SMIM22K7EJ46 135 aa17.11■□□□□ 0.33
TFAP2A-215ENST00000488193 BRD1O95696 1058 aa17.11■□□□□ 0.33
TFAP2A-215ENST00000488193 C7orf43Q8WVR3 580 aa17.11■□□□□ 0.33
TFAP2A-215ENST00000488193 NAPBQ9H115 298 aa17.11■□□□□ 0.33
TFAP2A-215ENST00000488193 NEDD4P46934 1319 aa17.1■□□□□ 0.33
TFAP2A-215ENST00000488193 C10orf71Q711Q0 1435 aa17.1■□□□□ 0.33
TFAP2A-215ENST00000488193 SNED1Q8TER0 1413 aa17.1■□□□□ 0.33
TFAP2A-215ENST00000488193 EVCP57679 992 aa17.1■□□□□ 0.33
TFAP2A-215ENST00000488193 CTDSPL2Q05D32 466 aa17.1■□□□□ 0.33
TFAP2A-215ENST00000488193 SPTY2D1Q68D10 685 aaPredicted RBP17.1■□□□□ 0.33
TFAP2A-215ENST00000488193 CYB5R4Q7L1T6 521 aa17.1■□□□□ 0.33
TFAP2A-215ENST00000488193 NCOA7Q8NI08 942 aa17.1■□□□□ 0.33
TFAP2A-215ENST00000488193 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.1■□□□□ 0.33
TFAP2A-215ENST00000488193 FAM205AQ6ZU69 1335 aa17.1■□□□□ 0.33
TFAP2A-215ENST00000488193 RIMBP2O15034 1052 aa17.1■□□□□ 0.33
TFAP2A-215ENST00000488193 APOBRQ0VD83 1088 aa17.1■□□□□ 0.33
TFAP2A-215ENST00000488193 TMED8Q6PL24 325 aaPredicted RBP17.1■□□□□ 0.33
TFAP2A-215ENST00000488193 GTF3C6Q969F1 213 aa17.1■□□□□ 0.33
TFAP2A-215ENST00000488193 PRC1O43663 620 aa17.09■□□□□ 0.33
TFAP2A-215ENST00000488193 IGSF3O75054 1194 aa17.09■□□□□ 0.33
TFAP2A-215ENST00000488193 LDHBP07195 334 aaKnown RBP17.09■□□□□ 0.33
TFAP2A-215ENST00000488193 STK3Q13188 491 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms