RNA–Protein interactions for RNA: ENST00000487996.5

HLA-DMB-261, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,746 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-261ENST00000487996 NFKBIEO00221 500 aa12.71□□□□□ -0.37
HLA-DMB-261ENST00000487996 SGSM2O43147 1006 aa12.71□□□□□ -0.37
HLA-DMB-261ENST00000487996 PDE6AP16499 860 aa12.71□□□□□ -0.37
HLA-DMB-261ENST00000487996 GTF2IP78347 998 aa12.71□□□□□ -0.37
HLA-DMB-261ENST00000487996 GSTO1P78417 241 aa12.71□□□□□ -0.37
HLA-DMB-261ENST00000487996 NMIQ13287 307 aaPredicted RBP12.71□□□□□ -0.37
HLA-DMB-261ENST00000487996 MCMDC2Q4G0Z9 681 aa12.71□□□□□ -0.37
HLA-DMB-261ENST00000487996 MFSD14BQ5SR56 506 aa12.71□□□□□ -0.37
HLA-DMB-261ENST00000487996 ZMYM1Q5SVZ6 1142 aa12.71□□□□□ -0.37
HLA-DMB-261ENST00000487996 DZIP1Q86YF9 867 aaKnown RBP12.71□□□□□ -0.37
HLA-DMB-261ENST00000487996 MAST2Q6P0Q8 1798 aa12.71□□□□□ -0.37
HLA-DMB-261ENST00000487996 USP17L3A6NCW0 530 aa12.71□□□□□ -0.38
HLA-DMB-261ENST00000487996 USP17L4A6NCW7 530 aa12.71□□□□□ -0.38
HLA-DMB-261ENST00000487996 USP17L1Q7RTZ2 530 aa12.71□□□□□ -0.38
HLA-DMB-261ENST00000487996 MAGEB6Q8N7X4 407 aa12.71□□□□□ -0.38
HLA-DMB-261ENST00000487996 FBXW7Q969H0 707 aa12.71□□□□□ -0.38
HLA-DMB-261ENST00000487996 ZNRF3Q9ULT6 936 aa12.71□□□□□ -0.38
HLA-DMB-261ENST00000487996 MYO3BQ8WXR4 1341 aa12.7□□□□□ -0.38
HLA-DMB-261ENST00000487996 MYO5AQ9Y4I1 1855 aaKnown RBP12.7□□□□□ -0.38
HLA-DMB-261ENST00000487996 LDHCP07864 332 aa12.7□□□□□ -0.38
HLA-DMB-261ENST00000487996 NAA16Q6N069 864 aaPredicted RBP12.7□□□□□ -0.38
HLA-DMB-261ENST00000487996 CERS3Q8IU89 383 aa12.7□□□□□ -0.38
HLA-DMB-261ENST00000487996 ZNF784Q8NCA9 323 aaPredicted RBP12.7□□□□□ -0.38
HLA-DMB-261ENST00000487996 FAM227BQ96M60 508 aa12.7□□□□□ -0.38
HLA-DMB-261ENST00000487996 PSME4Q14997 1843 aa12.69□□□□□ -0.38
HLA-DMB-261ENST00000487996 A0A0D9SFI3 127 aa12.69□□□□□ -0.38
HLA-DMB-261ENST00000487996 PRDX5P30044 214 aa12.69□□□□□ -0.38
HLA-DMB-261ENST00000487996 ARHGAP27Q6ZUM4 889 aa12.69□□□□□ -0.38
HLA-DMB-261ENST00000487996 ZNF532Q9HCE3 1301 aa12.69□□□□□ -0.38
HLA-DMB-261ENST00000487996 LMNB1P20700 586 aa12.68□□□□□ -0.38
HLA-DMB-261ENST00000487996 AIDAQ96BJ3 306 aa12.68□□□□□ -0.38
HLA-DMB-261ENST00000487996 NSUN4Q96CB9 384 aaKnown RBP12.68□□□□□ -0.38
HLA-DMB-261ENST00000487996 NOL10Q9BSC4 688 aaKnown RBP12.68□□□□□ -0.38
HLA-DMB-261ENST00000487996 ANO2Q9NQ90 1003 aa12.68□□□□□ -0.38
HLA-DMB-261ENST00000487996 JAG2Q9Y219 1238 aa12.68□□□□□ -0.38
HLA-DMB-261ENST00000487996 CCDC171Q6TFL3 1326 aa12.68□□□□□ -0.38
HLA-DMB-261ENST00000487996 SCN9AQ15858 1988 aa12.68□□□□□ -0.38
HLA-DMB-261ENST00000487996 TCRBV5S4A2TA0A5A2 114 aa12.68□□□□□ -0.38
HLA-DMB-261ENST00000487996 GRIN3BO60391 1043 aa12.68□□□□□ -0.38
HLA-DMB-261ENST00000487996 CYP7A1P22680 504 aa12.68□□□□□ -0.38
HLA-DMB-261ENST00000487996 MCCP23508 829 aa12.68□□□□□ -0.38
HLA-DMB-261ENST00000487996 MECOMQ03112 1051 aa12.68□□□□□ -0.38
HLA-DMB-261ENST00000487996 TNIP1Q15025 636 aa12.68□□□□□ -0.38
HLA-DMB-261ENST00000487996 GPR162Q16538 588 aa12.68□□□□□ -0.38
HLA-DMB-261ENST00000487996 GNAT2P19087 354 aa12.67□□□□□ -0.38
HLA-DMB-261ENST00000487996 MMP14P50281 582 aa12.67□□□□□ -0.38
HLA-DMB-261ENST00000487996 RASSF7Q02833 373 aa12.67□□□□□ -0.38
HLA-DMB-261ENST00000487996 DACT2Q5SW24 774 aa12.67□□□□□ -0.38
HLA-DMB-261ENST00000487996 OSBP2Q969R2 916 aa12.67□□□□□ -0.38
HLA-DMB-261ENST00000487996 DICER1Q9UPY3 1922 aaKnown RBP12.66□□□□□ -0.38
HLA-DMB-261ENST00000487996 YDJCA8MPS7 323 aa12.66□□□□□ -0.38
HLA-DMB-261ENST00000487996 BAG3O95817 575 aa12.66□□□□□ -0.38
HLA-DMB-261ENST00000487996 EIF6P56537 245 aaKnown RBP12.66□□□□□ -0.38
HLA-DMB-261ENST00000487996 MYH2Q9UKX2 1941 aa12.66□□□□□ -0.38
HLA-DMB-261ENST00000487996 MAGEB6P1A0A0J9YX57 407 aa12.65□□□□□ -0.38
HLA-DMB-261ENST00000487996 GPAA1O43292 621 aa12.65□□□□□ -0.38
HLA-DMB-261ENST00000487996 SEC24BO95487 1268 aa12.65□□□□□ -0.38
HLA-DMB-261ENST00000487996 VIL1P09327 827 aaKnown RBP12.65□□□□□ -0.38
HLA-DMB-261ENST00000487996 PLCG2P16885 1265 aa12.65□□□□□ -0.38
HLA-DMB-261ENST00000487996 HDLBPQ00341 1268 aaKnown RBP12.65□□□□□ -0.38
HLA-DMB-261ENST00000487996 CIAPIN1Q6FI81 312 aa12.65□□□□□ -0.38
HLA-DMB-261ENST00000487996 RSBN1LQ6PCB5 846 aaPredicted RBP12.65□□□□□ -0.38
HLA-DMB-261ENST00000487996 AGBL3Q8NEM8 1001 aa12.65□□□□□ -0.38
HLA-DMB-261ENST00000487996 FAM163AQ96GL9 167 aaPredicted RBP12.65□□□□□ -0.38
HLA-DMB-261ENST00000487996 DSCC1Q9BVC3 393 aa12.65□□□□□ -0.38
HLA-DMB-261ENST00000487996 MRIQ9BWK5 157 aa12.65□□□□□ -0.38
HLA-DMB-261ENST00000487996 PUS7LQ9H0K6 701 aaKnown RBP12.65□□□□□ -0.38
HLA-DMB-261ENST00000487996 TTF2Q9UNY4 1162 aaKnown RBP12.65□□□□□ -0.38
HLA-DMB-261ENST00000487996 RPAP1Q9BWH6 1393 aaPredicted RBP12.65□□□□□ -0.38
HLA-DMB-261ENST00000487996 YBX3P16989 372 aaKnown RBP eCLIP12.65□□□□□ -0.38
HLA-DMB-261ENST00000487996 RPS12P25398 132 aaKnown RBP12.65□□□□□ -0.38
HLA-DMB-261ENST00000487996 ZNF589Q86UQ0 364 aaPredicted RBP12.65□□□□□ -0.38
HLA-DMB-261ENST00000487996 OGFOD1Q8N543 542 aa12.65□□□□□ -0.38
HLA-DMB-261ENST00000487996 CERS5Q8N5B7 392 aa12.65□□□□□ -0.38
HLA-DMB-261ENST00000487996 TEKT1Q969V4 418 aa12.65□□□□□ -0.38
HLA-DMB-261ENST00000487996 SEC62Q99442 399 aaKnown RBP12.65□□□□□ -0.38
HLA-DMB-261ENST00000487996 USP26Q9BXU7 913 aa12.65□□□□□ -0.38
HLA-DMB-261ENST00000487996 C22orf23Q9BZE7 217 aa12.65□□□□□ -0.38
HLA-DMB-261ENST00000487996 HDAC9Q9UKV0 1011 aa12.65□□□□□ -0.38
HLA-DMB-261ENST00000487996 MROH7-TTC4A0A0A0MT08 1334 aa12.65□□□□□ -0.39
HLA-DMB-261ENST00000487996 COL4A5P29400 1685 aa12.64□□□□□ -0.39
HLA-DMB-261ENST00000487996 SBF1O95248 1867 aa12.64□□□□□ -0.39
HLA-DMB-261ENST00000487996 M0R2C6 588 aa12.64□□□□□ -0.39
HLA-DMB-261ENST00000487996 FZD9O00144 591 aa12.64□□□□□ -0.39
HLA-DMB-261ENST00000487996 PSMD14O00487 310 aa12.64□□□□□ -0.39
HLA-DMB-261ENST00000487996 RAD17O75943 681 aa12.64□□□□□ -0.39
HLA-DMB-261ENST00000487996 MBD4O95243 580 aa12.64□□□□□ -0.39
HLA-DMB-261ENST00000487996 MKRN4PQ13434 485 aaPredicted RBP12.64□□□□□ -0.39
HLA-DMB-261ENST00000487996 RNF20Q5VTR2 975 aa12.64□□□□□ -0.39
HLA-DMB-261ENST00000487996 HHIPL2Q6UWX4 724 aa12.64□□□□□ -0.39
HLA-DMB-261ENST00000487996 DDRGK1Q96HY6 314 aa12.64□□□□□ -0.39
HLA-DMB-261ENST00000487996 NACAP1Q9BZK3 213 aa12.64□□□□□ -0.39
HLA-DMB-261ENST00000487996 LSG1Q9H089 658 aaKnown RBP12.64□□□□□ -0.39
HLA-DMB-261ENST00000487996 IL25Q9H293 177 aa12.64□□□□□ -0.39
HLA-DMB-261ENST00000487996 KCNQ5Q9NR82 932 aa12.64□□□□□ -0.39
HLA-DMB-261ENST00000487996 CTNNA3Q9UI47 895 aa12.64□□□□□ -0.39
HLA-DMB-261ENST00000487996 ZNF646O15015 1829 aaPredicted RBP12.64□□□□□ -0.39
HLA-DMB-261ENST00000487996 CHGBP05060 677 aa12.63□□□□□ -0.39
HLA-DMB-261ENST00000487996 CXCL9Q07325 125 aa12.63□□□□□ -0.39
HLA-DMB-261ENST00000487996 MIGA1Q8NAN2 632 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms