RNA–Protein interactions for RNA: ENST00000487976.2

CCDC180-205, Transcript of coiled-coil domain containing 180, humanhuman

TSL 1 (best)

Gene CCDC180, Length 3,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC180-205ENST00000487976 SATB1Q01826 763 aa12.38□□□□□ -0.43
CCDC180-205ENST00000487976 GOLGA8FQ08AF8 430 aa12.38□□□□□ -0.43
CCDC180-205ENST00000487976 GOLGA8DPQ0D2H9 430 aa12.38□□□□□ -0.43
CCDC180-205ENST00000487976 KCNH5Q8NCM2 988 aa12.38□□□□□ -0.43
CCDC180-205ENST00000487976 FAM204AQ9H8W3 233 aa12.38□□□□□ -0.43
CCDC180-205ENST00000487976 CEMIPQ8WUJ3 1361 aa12.38□□□□□ -0.43
CCDC180-205ENST00000487976 MED1Q15648 1581 aaPredicted RBP12.38□□□□□ -0.43
CCDC180-205ENST00000487976 BIN1O00499 593 aa12.38□□□□□ -0.43
CCDC180-205ENST00000487976 SERPINC1P01008 464 aa12.38□□□□□ -0.43
CCDC180-205ENST00000487976 TOP1P11387 765 aaKnown RBP12.38□□□□□ -0.43
CCDC180-205ENST00000487976 UBASH3AP57075 661 aa12.38□□□□□ -0.43
CCDC180-205ENST00000487976 SRGAP1Q7Z6B7 1085 aa12.38□□□□□ -0.43
CCDC180-205ENST00000487976 ERC1Q8IUD2 1116 aa12.38□□□□□ -0.43
CCDC180-205ENST00000487976 KIFC2Q96AC6 838 aa12.38□□□□□ -0.43
CCDC180-205ENST00000487976 USP28Q96RU2 1077 aa12.38□□□□□ -0.43
CCDC180-205ENST00000487976 ALDH8A1Q9H2A2 487 aaPredicted RBP12.38□□□□□ -0.43
CCDC180-205ENST00000487976 CRYBG1Q9Y4K1 1723 aa12.38□□□□□ -0.43
CCDC180-205ENST00000487976 ADD1P35611 737 aaKnown RBP12.37□□□□□ -0.43
CCDC180-205ENST00000487976 USP5P45974 858 aa12.37□□□□□ -0.43
CCDC180-205ENST00000487976 HSPA2P54652 639 aa12.37□□□□□ -0.43
CCDC180-205ENST00000487976 CFAP100Q494V2 611 aa12.37□□□□□ -0.43
CCDC180-205ENST00000487976 MAP4K1Q92918 833 aa12.37□□□□□ -0.43
CCDC180-205ENST00000487976 GBP3Q9H0R5 595 aa12.37□□□□□ -0.43
CCDC180-205ENST00000487976 ABCB6Q9NP58 842 aa12.37□□□□□ -0.43
CCDC180-205ENST00000487976 L1RE1Q9UN81 338 aa12.37□□□□□ -0.43
CCDC180-205ENST00000487976 HOXB7P09629 217 aa12.37□□□□□ -0.43
CCDC180-205ENST00000487976 GPATCH3Q96I76 525 aa12.37□□□□□ -0.43
CCDC180-205ENST00000487976 USP44Q9H0E7 712 aa12.37□□□□□ -0.43
CCDC180-205ENST00000487976 ANKZF1Q9H8Y5 726 aa12.37□□□□□ -0.43
CCDC180-205ENST00000487976 USP42Q9H9J4 1324 aaKnown RBP12.36□□□□□ -0.43
CCDC180-205ENST00000487976 WDHD1O75717 1129 aaPredicted RBP12.36□□□□□ -0.43
CCDC180-205ENST00000487976 LIG3P49916 1009 aa12.36□□□□□ -0.43
CCDC180-205ENST00000487976 NLRP12P59046 1061 aa12.36□□□□□ -0.43
CCDC180-205ENST00000487976 SKIDA1Q1XH10 827 aa12.36□□□□□ -0.43
CCDC180-205ENST00000487976 WWC2Q6AWC2 1192 aa12.36□□□□□ -0.43
CCDC180-205ENST00000487976 FMR1NBQ8N0W7 255 aaPredicted RBP12.36□□□□□ -0.43
CCDC180-205ENST00000487976 LTV1Q96GA3 475 aaPredicted RBP12.36□□□□□ -0.43
CCDC180-205ENST00000487976 PUF60Q9UHX1 559 aaKnown RBP12.36□□□□□ -0.43
CCDC180-205ENST00000487976 RAB21Q9UL25 225 aa12.36□□□□□ -0.43
CCDC180-205ENST00000487976 ATP1A3P13637 1013 aa12.36□□□□□ -0.43
CCDC180-205ENST00000487976 POLA2Q14181 598 aa12.36□□□□□ -0.43
CCDC180-205ENST00000487976 CASP8Q14790 479 aa12.36□□□□□ -0.43
CCDC180-205ENST00000487976 NCAPHQ15003 741 aa12.36□□□□□ -0.43
CCDC180-205ENST00000487976 HSP90AB4PQ58FF6 505 aa12.36□□□□□ -0.43
CCDC180-205ENST00000487976 ISM2Q6H9L7 571 aa12.36□□□□□ -0.43
CCDC180-205ENST00000487976 CEP112Q8N8E3 955 aa12.36□□□□□ -0.43
CCDC180-205ENST00000487976 AFAP1L1Q8TED9 768 aa12.36□□□□□ -0.43
CCDC180-205ENST00000487976 SUGCTQ9HAC7 445 aa12.36□□□□□ -0.43
CCDC180-205ENST00000487976 A0A1B0GVL5 298 aa12.36□□□□□ -0.43
CCDC180-205ENST00000487976 CUTAO60888 179 aa12.36□□□□□ -0.43
CCDC180-205ENST00000487976 SLC3A2P08195 630 aaKnown RBP12.36□□□□□ -0.43
CCDC180-205ENST00000487976 ATL3Q6DD88 541 aa12.36□□□□□ -0.43
CCDC180-205ENST00000487976 VSTM4Q8IW00 320 aa12.36□□□□□ -0.43
CCDC180-205ENST00000487976 EVI5LQ96CN4 794 aa12.36□□□□□ -0.43
CCDC180-205ENST00000487976 PNKPQ96T60 521 aa12.36□□□□□ -0.43
CCDC180-205ENST00000487976 BAG1Q99933 345 aaPredicted RBP12.36□□□□□ -0.43
CCDC180-205ENST00000487976 MYH15Q9Y2K3 1946 aa12.36□□□□□ -0.43
CCDC180-205ENST00000487976 HNRNPH1P31943 449 aaKnown RBP12.35□□□□□ -0.43
CCDC180-205ENST00000487976 NMIQ13287 307 aaPredicted RBP12.35□□□□□ -0.43
CCDC180-205ENST00000487976 KARSQ15046 597 aaKnown RBP12.35□□□□□ -0.43
CCDC180-205ENST00000487976 NAA16Q6N069 864 aaPredicted RBP12.35□□□□□ -0.43
CCDC180-205ENST00000487976 MSANTD4Q8NCY6 345 aa12.35□□□□□ -0.43
CCDC180-205ENST00000487976 KAT2BQ92831 832 aa12.35□□□□□ -0.43
CCDC180-205ENST00000487976 FAM227BQ96M60 508 aa12.35□□□□□ -0.43
CCDC180-205ENST00000487976 HIP1O00291 1037 aa12.35□□□□□ -0.43
CCDC180-205ENST00000487976 HDGFL1Q5TGJ6 251 aa12.35□□□□□ -0.43
CCDC180-205ENST00000487976 RPAINQ86UA6 219 aa12.35□□□□□ -0.43
CCDC180-205ENST00000487976 DPF2Q92785 391 aa12.35□□□□□ -0.43
CCDC180-205ENST00000487976 ECHDC1Q9NTX5 307 aa12.35□□□□□ -0.43
CCDC180-205ENST00000487976 IKBKBO14920 756 aa12.34□□□□□ -0.43
CCDC180-205ENST00000487976 CLASRPQ8N2M8 674 aaKnown RBP12.34□□□□□ -0.43
CCDC180-205ENST00000487976 PDILTQ8N807 584 aa12.34□□□□□ -0.43
CCDC180-205ENST00000487976 SIL1Q9H173 461 aa12.34□□□□□ -0.43
CCDC180-205ENST00000487976 NDUFA8P51970 172 aa12.34□□□□□ -0.43
CCDC180-205ENST00000487976 SF3A1Q15459 793 aaKnown RBP12.34□□□□□ -0.43
CCDC180-205ENST00000487976 TMEM139Q8IV31 216 aa12.34□□□□□ -0.43
CCDC180-205ENST00000487976 FAM212AQ96EL1 285 aa12.34□□□□□ -0.43
CCDC180-205ENST00000487976 PCDHA7Q9UN72 937 aa12.34□□□□□ -0.43
CCDC180-205ENST00000487976 LMO7Q8WWI1 1683 aa12.34□□□□□ -0.43
CCDC180-205ENST00000487976 KDM3BQ7LBC6 1761 aa12.34□□□□□ -0.43
CCDC180-205ENST00000487976 RNF40O75150 1001 aa12.34□□□□□ -0.43
CCDC180-205ENST00000487976 PLEKHO1Q53GL0 409 aaPredicted RBP12.34□□□□□ -0.43
CCDC180-205ENST00000487976 TOGARAM2Q6ZUX3 1019 aa12.34□□□□□ -0.43
CCDC180-205ENST00000487976 HMG20BQ9P0W2 317 aa12.34□□□□□ -0.43
CCDC180-205ENST00000487976 TAF6LQ9Y6J9 622 aa12.34□□□□□ -0.43
CCDC180-205ENST00000487976 OVOS2A0A0G2JMS6 1433 aa12.33□□□□□ -0.44
CCDC180-205ENST00000487976 NCAPD2Q15021 1401 aa12.33□□□□□ -0.44
CCDC180-205ENST00000487976 RHOXF2BP0C7M4 288 aa12.33□□□□□ -0.44
CCDC180-205ENST00000487976 TUBB4BP68371 445 aa12.33□□□□□ -0.44
CCDC180-205ENST00000487976 USHBP1Q8N6Y0 703 aa12.33□□□□□ -0.44
CCDC180-205ENST00000487976 RHOXF2Q9BQY4 288 aa12.33□□□□□ -0.44
CCDC180-205ENST00000487976 STRCQ7RTU9 1775 aa12.33□□□□□ -0.44
CCDC180-205ENST00000487976 SLIT3O75094 1523 aa12.33□□□□□ -0.44
CCDC180-205ENST00000487976 PTPN21Q16825 1174 aa12.33□□□□□ -0.44
CCDC180-205ENST00000487976 FBXW10Q5XX13 1052 aa12.33□□□□□ -0.44
CCDC180-205ENST00000487976 ADALQ6DHV7 355 aa12.33□□□□□ -0.44
CCDC180-205ENST00000487976 GBP6Q6ZN66 633 aa12.33□□□□□ -0.44
CCDC180-205ENST00000487976 GIMAP7Q8NHV1 300 aa12.33□□□□□ -0.44
CCDC180-205ENST00000487976 CDC23Q9UJX2 597 aa12.33□□□□□ -0.44
CCDC180-205ENST00000487976 A0A1W2PQ27 194 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms