RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 ADAM11O75078 769 aa8.27□□□□□ -1.09
BRCA1-217ENST00000487825 PIP4K2BP78356 416 aa8.27□□□□□ -1.09
BRCA1-217ENST00000487825 DUOXA2Q1HG44 320 aa8.27□□□□□ -1.09
BRCA1-217ENST00000487825 PEAR1Q5VY43 1037 aaPredicted RBP8.27□□□□□ -1.09
BRCA1-217ENST00000487825 HGSNATQ68CP4 663 aa8.27□□□□□ -1.09
BRCA1-217ENST00000487825 UBASH3BQ8TF42 649 aa8.27□□□□□ -1.09
BRCA1-217ENST00000487825 SOX13Q9UN79 622 aa8.27□□□□□ -1.09
BRCA1-217ENST00000487825 UACAQ9BZF9 1416 aa8.27□□□□□ -1.09
BRCA1-217ENST00000487825 WDR7Q9Y4E6 1490 aa8.26□□□□□ -1.09
BRCA1-217ENST00000487825 TNIKQ9UKE5 1360 aa8.26□□□□□ -1.09
BRCA1-217ENST00000487825 ARAP3Q8WWN8 1544 aa8.26□□□□□ -1.09
BRCA1-217ENST00000487825 NLRP12P59046 1061 aa8.26□□□□□ -1.09
BRCA1-217ENST00000487825 CCER1Q8TC90 406 aaPredicted RBP8.26□□□□□ -1.09
BRCA1-217ENST00000487825 FOXD4L4Q8WXT5 416 aaPredicted RBP8.26□□□□□ -1.09
BRCA1-217ENST00000487825 BSNDQ8WZ55 320 aa8.26□□□□□ -1.09
BRCA1-217ENST00000487825 STRCQ7RTU9 1775 aa8.25□□□□□ -1.09
BRCA1-217ENST00000487825 USPL1Q5W0Q7 1092 aa8.25□□□□□ -1.09
BRCA1-217ENST00000487825 KIAA1211Q6ZU35 1233 aa8.25□□□□□ -1.09
BRCA1-217ENST00000487825 Q8N3U1 123 aa8.25□□□□□ -1.09
BRCA1-217ENST00000487825 TMC1Q8TDI8 760 aa8.25□□□□□ -1.09
BRCA1-217ENST00000487825 UBL7Q96S82 380 aaPredicted RBP8.25□□□□□ -1.09
BRCA1-217ENST00000487825 CARMIL2Q6F5E8 1435 aa8.24□□□□□ -1.09
BRCA1-217ENST00000487825 METTL12A8MUP2 240 aa8.24□□□□□ -1.09
BRCA1-217ENST00000487825 SOX1O00570 391 aaPredicted RBP8.24□□□□□ -1.09
BRCA1-217ENST00000487825 PRR23CQ6ZRP0 262 aa8.24□□□□□ -1.09
BRCA1-217ENST00000487825 Q6ZS46 218 aa8.24□□□□□ -1.09
BRCA1-217ENST00000487825 VN1R5Q7Z5H4 357 aa8.24□□□□□ -1.09
BRCA1-217ENST00000487825 WNT8BQ93098 351 aa8.24□□□□□ -1.09
BRCA1-217ENST00000487825 BHLHE41Q9C0J9 482 aaPredicted RBP8.24□□□□□ -1.09
BRCA1-217ENST00000487825 OSGEPQ9NPF4 335 aa8.24□□□□□ -1.09
BRCA1-217ENST00000487825 PREX1Q8TCU6 1659 aa8.24□□□□□ -1.09
BRCA1-217ENST00000487825 CD109Q6YHK3 1445 aa8.23□□□□□ -1.09
BRCA1-217ENST00000487825 ARL4DP49703 201 aa8.23□□□□□ -1.09
BRCA1-217ENST00000487825 HSPA2P54652 639 aa8.23□□□□□ -1.09
BRCA1-217ENST00000487825 C19orf57Q0VDD7 668 aa8.23□□□□□ -1.09
BRCA1-217ENST00000487825 PDE3BQ13370 1112 aa8.23□□□□□ -1.09
BRCA1-217ENST00000487825 ORC1Q13415 861 aa8.23□□□□□ -1.09
BRCA1-217ENST00000487825 IKBKEQ14164 716 aa8.23□□□□□ -1.09
BRCA1-217ENST00000487825 IQGAP2Q13576 1575 aa8.22□□□□□ -1.09
BRCA1-217ENST00000487825 A0A1W2PP55 124 aa8.22□□□□□ -1.09
BRCA1-217ENST00000487825 SCO2A0A1W2PP80 73 aa8.22□□□□□ -1.09
BRCA1-217ENST00000487825 XP32Q5T750 250 aa8.22□□□□□ -1.09
BRCA1-217ENST00000487825 GALNT12Q8IXK2 581 aa8.22□□□□□ -1.09
BRCA1-217ENST00000487825 FAM129BQ96TA1 746 aa8.22□□□□□ -1.09
BRCA1-217ENST00000487825 FER1L4A9Z1Z3 1794 aa8.22□□□□□ -1.09
BRCA1-217ENST00000487825 NEFLP07196 543 aa8.21□□□□□ -1.1
BRCA1-217ENST00000487825 CEP41Q9BYV8 373 aa8.21□□□□□ -1.1
BRCA1-217ENST00000487825 NIF3L1Q9GZT8 377 aa8.21□□□□□ -1.1
BRCA1-217ENST00000487825 LIN7BQ9HAP6 207 aa8.21□□□□□ -1.1
BRCA1-217ENST00000487825 FRMPD1Q5SYB0 1578 aa8.21□□□□□ -1.1
BRCA1-217ENST00000487825 IQSEC2Q5JU85 1478 aa8.2□□□□□ -1.1
BRCA1-217ENST00000487825 ARHGEF40Q8TER5 1519 aa8.2□□□□□ -1.1
BRCA1-217ENST00000487825 DISP1Q96F81 1524 aa8.2□□□□□ -1.1
BRCA1-217ENST00000487825 SOWAHDA6NJG2 315 aa8.2□□□□□ -1.1
BRCA1-217ENST00000487825 GPR182O15218 404 aa8.2□□□□□ -1.1
BRCA1-217ENST00000487825 CPNE3O75131 537 aaKnown RBP8.2□□□□□ -1.1
BRCA1-217ENST00000487825 SPRED3Q2MJR0 410 aa8.2□□□□□ -1.1
BRCA1-217ENST00000487825 CITED4Q96RK1 184 aa8.2□□□□□ -1.1
BRCA1-217ENST00000487825 USP26Q9BXU7 913 aa8.2□□□□□ -1.1
BRCA1-217ENST00000487825 BIN2Q9UBW5 565 aaPredicted RBP8.2□□□□□ -1.1
BRCA1-217ENST00000487825 TTC37Q6PGP7 1564 aa8.19□□□□□ -1.1
BRCA1-217ENST00000487825 A0A096LPE4 126 aa8.19□□□□□ -1.1
BRCA1-217ENST00000487825 A0A1W2PPZ6 126 aa8.19□□□□□ -1.1
BRCA1-217ENST00000487825 BRD1O95696 1058 aa8.19□□□□□ -1.1
BRCA1-217ENST00000487825 ESRRAP11474 423 aaPredicted RBP8.19□□□□□ -1.1
BRCA1-217ENST00000487825 GRIA4P48058 902 aa8.19□□□□□ -1.1
BRCA1-217ENST00000487825 CCNJLQ8IV13 435 aa8.19□□□□□ -1.1
BRCA1-217ENST00000487825 ARMC10Q8N2F6 343 aa8.19□□□□□ -1.1
BRCA1-217ENST00000487825 TCF12Q99081 682 aa8.19□□□□□ -1.1
BRCA1-217ENST00000487825 RUSC1Q9BVN2 902 aa8.19□□□□□ -1.1
BRCA1-217ENST00000487825 TTBK1Q5TCY1 1321 aaPredicted RBP8.19□□□□□ -1.1
BRCA1-217ENST00000487825 SIGLEC1Q9BZZ2 1709 aa8.18□□□□□ -1.1
BRCA1-217ENST00000487825 EIF1AYO14602 144 aaKnown RBP8.18□□□□□ -1.1
BRCA1-217ENST00000487825 DHX15O43143 795 aaKnown RBP8.18□□□□□ -1.1
BRCA1-217ENST00000487825 GSTM4Q03013 218 aa8.18□□□□□ -1.1
BRCA1-217ENST00000487825 UTP4Q969X6 686 aaKnown RBP8.18□□□□□ -1.1
BRCA1-217ENST00000487825 RNF208Q9H0X6 261 aa8.18□□□□□ -1.1
BRCA1-217ENST00000487825 NPHS2Q9NP85 383 aa8.18□□□□□ -1.1
BRCA1-217ENST00000487825 STOML1Q9UBI4 398 aa8.18□□□□□ -1.1
BRCA1-217ENST00000487825 RAXQ9Y2V3 346 aa8.18□□□□□ -1.1
BRCA1-217ENST00000487825 SART1O43290 800 aaKnown RBP8.17□□□□□ -1.1
BRCA1-217ENST00000487825 IGHA2P01877 340 aa8.17□□□□□ -1.1
BRCA1-217ENST00000487825 FSTP19883 344 aa8.17□□□□□ -1.1
BRCA1-217ENST00000487825 PCDH1Q08174 1060 aa8.17□□□□□ -1.1
BRCA1-217ENST00000487825 FAM46AQ96IP4 442 aaKnown RBP8.17□□□□□ -1.1
BRCA1-217ENST00000487825 EHD4Q9H223 541 aa8.17□□□□□ -1.1
BRCA1-217ENST00000487825 GNEQ9Y223 722 aaKnown RBP8.17□□□□□ -1.1
BRCA1-217ENST00000487825 MED1Q15648 1581 aaPredicted RBP8.17□□□□□ -1.1
BRCA1-217ENST00000487825 KIAA0556O60303 1618 aa8.17□□□□□ -1.1
BRCA1-217ENST00000487825 LTBP4Q8N2S1 1624 aa8.17□□□□□ -1.1
BRCA1-217ENST00000487825 LOC100289279A0A1B0GTE1 492 aa8.16□□□□□ -1.1
BRCA1-217ENST00000487825 ZNF423Q2M1K9 1284 aa8.16□□□□□ -1.1
BRCA1-217ENST00000487825 FDX2Q6P4F2 183 aa8.16□□□□□ -1.1
BRCA1-217ENST00000487825 RICTORQ6R327 1708 aa8.16□□□□□ -1.1
BRCA1-217ENST00000487825 ABCA9Q8IUA7 1624 aa8.15□□□□□ -1.1
BRCA1-217ENST00000487825 YEATS2Q9ULM3 1422 aa8.15□□□□□ -1.1
BRCA1-217ENST00000487825 PREPP48147 710 aa8.15□□□□□ -1.1
BRCA1-217ENST00000487825 KIAA0319Q5VV43 1072 aa8.15□□□□□ -1.1
BRCA1-217ENST00000487825 ANKRD34AQ69YU3 496 aa8.15□□□□□ -1.1
BRCA1-217ENST00000487825 CCDC74AQ96AQ1 378 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 150.4 ms