RNA–Protein interactions for RNA: ENST00000487625.1

USP9X-208, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 2

Gene USP9X, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-208ENST00000487625 FAM105AQ9NUU6 356 aa6.47□□□□□ -1.37
USP9X-208ENST00000487625 PITPNM2Q9BZ72 1349 aa6.47□□□□□ -1.37
USP9X-208ENST00000487625 WEE1P30291 646 aa6.46□□□□□ -1.38
USP9X-208ENST00000487625 FAM26DQ5JW98 314 aa6.46□□□□□ -1.38
USP9X-208ENST00000487625 VTI1AQ96AJ9 217 aa6.46□□□□□ -1.38
USP9X-208ENST00000487625 ABI2Q9NYB9 513 aaPredicted RBP6.46□□□□□ -1.38
USP9X-208ENST00000487625 KANSL3Q9P2N6 904 aa6.46□□□□□ -1.38
USP9X-208ENST00000487625 A6NJR5 290 aa6.45□□□□□ -1.38
USP9X-208ENST00000487625 TRPA1O75762 1119 aa6.45□□□□□ -1.38
USP9X-208ENST00000487625 NFKB2Q00653 900 aa6.45□□□□□ -1.38
USP9X-208ENST00000487625 NEUROD2Q15784 382 aa6.45□□□□□ -1.38
USP9X-208ENST00000487625 AOC3Q16853 763 aa6.45□□□□□ -1.38
USP9X-208ENST00000487625 ANGEL2Q5VTE6 544 aaKnown RBP6.45□□□□□ -1.38
USP9X-208ENST00000487625 CIAPIN1Q6FI81 312 aa6.45□□□□□ -1.38
USP9X-208ENST00000487625 VN1R5Q7Z5H4 357 aa6.45□□□□□ -1.38
USP9X-208ENST00000487625 CTNND2Q9UQB3 1225 aa6.45□□□□□ -1.38
USP9X-208ENST00000487625 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.44□□□□□ -1.38
USP9X-208ENST00000487625 PDE2AO00408 941 aaPredicted RBP6.44□□□□□ -1.38
USP9X-208ENST00000487625 GLI1P08151 1106 aa6.44□□□□□ -1.38
USP9X-208ENST00000487625 DPYDQ12882 1025 aa6.44□□□□□ -1.38
USP9X-208ENST00000487625 IKBKEQ14164 716 aa6.44□□□□□ -1.38
USP9X-208ENST00000487625 CYP27C1Q4G0S4 372 aa6.44□□□□□ -1.38
USP9X-208ENST00000487625 FBXO15Q8NCQ5 510 aaPredicted RBP6.44□□□□□ -1.38
USP9X-208ENST00000487625 PARD6AQ9NPB6 346 aa6.44□□□□□ -1.38
USP9X-208ENST00000487625 DZANK1Q9NVP4 752 aa6.44□□□□□ -1.38
USP9X-208ENST00000487625 COG6Q9Y2V7 657 aa6.44□□□□□ -1.38
USP9X-208ENST00000487625 MPZL3Q6UWV2 235 aa6.43□□□□□ -1.38
USP9X-208ENST00000487625 HRASLS5Q96KN8 279 aa6.43□□□□□ -1.38
USP9X-208ENST00000487625 SOX17Q9H6I2 414 aaPredicted RBP6.43□□□□□ -1.38
USP9X-208ENST00000487625 SALL4Q9UJQ4 1053 aa6.43□□□□□ -1.38
USP9X-208ENST00000487625 IFI16Q16666 785 aaKnown RBP6.42□□□□□ -1.38
USP9X-208ENST00000487625 PIK3R5Q8WYR1 880 aa6.42□□□□□ -1.38
USP9X-208ENST00000487625 NRSN2Q9GZP1 204 aa6.42□□□□□ -1.38
USP9X-208ENST00000487625 LGR6Q9HBX8 967 aa6.42□□□□□ -1.38
USP9X-208ENST00000487625 SYN1P17600 705 aa6.41□□□□□ -1.38
USP9X-208ENST00000487625 ATG14Q6ZNE5 492 aa6.41□□□□□ -1.38
USP9X-208ENST00000487625 DYMQ7RTS9 669 aa6.41□□□□□ -1.38
USP9X-208ENST00000487625 GSX1Q9H4S2 264 aaPredicted RBP6.41□□□□□ -1.38
USP9X-208ENST00000487625 DAGLAQ9Y4D2 1042 aa6.41□□□□□ -1.38
USP9X-208ENST00000487625 MED14OSP0DP75 135 aa6.4□□□□□ -1.38
USP9X-208ENST00000487625 PTK7Q13308 1070 aa6.4□□□□□ -1.38
USP9X-208ENST00000487625 KCNK12Q9HB15 430 aa6.4□□□□□ -1.38
USP9X-208ENST00000487625 PLAGL2Q9UPG8 496 aa6.4□□□□□ -1.38
USP9X-208ENST00000487625 POM121CA8CG34 1229 aa6.39□□□□□ -1.39
USP9X-208ENST00000487625 NUAK1O60285 661 aa6.39□□□□□ -1.39
USP9X-208ENST00000487625 CTSBP07858 339 aa6.39□□□□□ -1.39
USP9X-208ENST00000487625 TMEM253P0C7T8 217 aa6.39□□□□□ -1.39
USP9X-208ENST00000487625 FAM87AP0C7U9 286 aa6.39□□□□□ -1.39
USP9X-208ENST00000487625 BSNDQ8WZ55 320 aa6.39□□□□□ -1.39
USP9X-208ENST00000487625 DIRC2Q96SL1 478 aa6.39□□□□□ -1.39
USP9X-208ENST00000487625 NSUN3Q9H649 340 aaKnown RBP6.39□□□□□ -1.39
USP9X-208ENST00000487625 TMEM63CQ9P1W3 806 aa6.39□□□□□ -1.39
USP9X-208ENST00000487625 CNTN3Q9P232 1028 aa6.39□□□□□ -1.39
USP9X-208ENST00000487625 FNDC3AQ9Y2H6 1198 aaKnown RBP6.39□□□□□ -1.39
USP9X-208ENST00000487625 AFMP43652 599 aa6.38□□□□□ -1.39
USP9X-208ENST00000487625 MCM6Q14566 821 aa6.38□□□□□ -1.39
USP9X-208ENST00000487625 SKOR2Q2VWA4 1001 aaPredicted RBP6.38□□□□□ -1.39
USP9X-208ENST00000487625 TMEM102Q8N9M5 508 aaPredicted RBP6.38□□□□□ -1.39
USP9X-208ENST00000487625 SAP130Q9H0E3 1048 aa6.38□□□□□ -1.39
USP9X-208ENST00000487625 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.38□□□□□ -1.39
USP9X-208ENST00000487625 TCAF2A6NFQ2 919 aa6.37□□□□□ -1.39
USP9X-208ENST00000487625 CEACAM5P06731 702 aa6.37□□□□□ -1.39
USP9X-208ENST00000487625 ESRRAP11474 423 aaPredicted RBP6.37□□□□□ -1.39
USP9X-208ENST00000487625 ASPAP45381 313 aa6.37□□□□□ -1.39
USP9X-208ENST00000487625 OXCT1P55809 520 aa6.37□□□□□ -1.39
USP9X-208ENST00000487625 LINC00310P59036 64 aa6.37□□□□□ -1.39
USP9X-208ENST00000487625 CDK5R2Q13319 367 aa6.37□□□□□ -1.39
USP9X-208ENST00000487625 AKAP4Q5JQC9 854 aa6.37□□□□□ -1.39
USP9X-208ENST00000487625 LARP1Q6PKG0 1096 aaKnown RBP6.37□□□□□ -1.39
USP9X-208ENST00000487625 PRRT2Q7Z6L0 340 aaPredicted RBP6.37□□□□□ -1.39
USP9X-208ENST00000487625 KIRREL1Q96J84 757 aa6.37□□□□□ -1.39
USP9X-208ENST00000487625 ZCCHC4Q9H5U6 513 aa6.37□□□□□ -1.39
USP9X-208ENST00000487625 MKNK2Q9HBH9 465 aa6.37□□□□□ -1.39
USP9X-208ENST00000487625 SMG5Q9UPR3 1016 aaKnown RBP6.37□□□□□ -1.39
USP9X-208ENST00000487625 TMEM265A0A087WTH1 108 aa6.36□□□□□ -1.39
USP9X-208ENST00000487625 BRD2P25440 801 aaKnown RBP6.36□□□□□ -1.39
USP9X-208ENST00000487625 GSTM4Q03013 218 aa6.36□□□□□ -1.39
USP9X-208ENST00000487625 ANKMY2Q8IV38 441 aa6.36□□□□□ -1.39
USP9X-208ENST00000487625 NXPE3Q969Y0 559 aa6.36□□□□□ -1.39
USP9X-208ENST00000487625 FAM13BQ9NYF5 915 aa6.36□□□□□ -1.39
USP9X-208ENST00000487625 AP4E1Q9UPM8 1137 aa6.36□□□□□ -1.39
USP9X-208ENST00000487625 NFIXQ14938 502 aa6.35□□□□□ -1.39
USP9X-208ENST00000487625 TMEM67Q5HYA8 995 aa6.35□□□□□ -1.39
USP9X-208ENST00000487625 GPR152Q8TDT2 470 aa6.35□□□□□ -1.39
USP9X-208ENST00000487625 ELP3Q9H9T3 547 aa6.35□□□□□ -1.39
USP9X-208ENST00000487625 ETV2O00321 342 aaPredicted RBP6.34□□□□□ -1.39
USP9X-208ENST00000487625 TNFRSF10BO14763 440 aa6.34□□□□□ -1.39
USP9X-208ENST00000487625 BMP7P18075 431 aa6.34□□□□□ -1.39
USP9X-208ENST00000487625 GLDCP23378 1020 aa6.34□□□□□ -1.39
USP9X-208ENST00000487625 ZP2Q05996 745 aa6.34□□□□□ -1.39
USP9X-208ENST00000487625 FKBP5Q13451 457 aaPredicted RBP6.34□□□□□ -1.39
USP9X-208ENST00000487625 IRF2BPLQ9H1B7 796 aa6.34□□□□□ -1.39
USP9X-208ENST00000487625 USP17L15C9J2P7 530 aa6.33□□□□□ -1.4
USP9X-208ENST00000487625 USP17L10C9JJH3 530 aa6.33□□□□□ -1.4
USP9X-208ENST00000487625 USP17L13C9JLJ4 530 aa6.33□□□□□ -1.4
USP9X-208ENST00000487625 USP17L12C9JPN9 530 aa6.33□□□□□ -1.4
USP9X-208ENST00000487625 USP17L11C9JVI0 530 aa6.33□□□□□ -1.4
USP9X-208ENST00000487625 USP17L21D6R901 530 aa6.33□□□□□ -1.4
USP9X-208ENST00000487625 USP17L18D6R9N7 530 aa6.33□□□□□ -1.4
USP9X-208ENST00000487625 USP17L22D6RA61 530 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms