RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-215ENST00000487563 ARHGAP45Q92619 1136 aa29.41■■■□□ 2.3
PLOD3-215ENST00000487563 SLC10A4Q96EP9 437 aa29.41■■■□□ 2.3
PLOD3-215ENST00000487563 MEIS3Q99687 375 aa29.41■■■□□ 2.3
PLOD3-215ENST00000487563 FBXO3Q9UK99 471 aa29.41■■■□□ 2.3
PLOD3-215ENST00000487563 CIAO1O76071 339 aa29.4■■■□□ 2.3
PLOD3-215ENST00000487563 IREB2P48200 963 aaKnown RBP29.4■■■□□ 2.3
PLOD3-215ENST00000487563 MAP3K11Q16584 847 aa29.4■■■□□ 2.3
PLOD3-215ENST00000487563 ATG9AQ7Z3C6 839 aa29.4■■■□□ 2.3
PLOD3-215ENST00000487563 TEKT1Q969V4 418 aa29.4■■■□□ 2.3
PLOD3-215ENST00000487563 CEP126Q9P2H0 1117 aa29.4■■■□□ 2.3
PLOD3-215ENST00000487563 MAST3O60307 1309 aa29.4■■■□□ 2.3
PLOD3-215ENST00000487563 TNNI2P48788 182 aa29.39■■■□□ 2.3
PLOD3-215ENST00000487563 HDLBPQ00341 1268 aaKnown RBP29.39■■■□□ 2.3
PLOD3-215ENST00000487563 SPRYD7Q5W111 196 aa29.39■■■□□ 2.3
PLOD3-215ENST00000487563 TCP10L2B9ZVM9 353 aa29.38■■■□□ 2.29
PLOD3-215ENST00000487563 IPO8O15397 1037 aaKnown RBP29.38■■■□□ 2.29
PLOD3-215ENST00000487563 TM4SF4P48230 202 aa29.38■■■□□ 2.29
PLOD3-215ENST00000487563 ATP2B3Q16720 1220 aa29.38■■■□□ 2.29
PLOD3-215ENST00000487563 GNAI3P08754 354 aa29.37■■■□□ 2.29
PLOD3-215ENST00000487563 INTS3Q68E01 1043 aaKnown RBP29.37■■■□□ 2.29
PLOD3-215ENST00000487563 CLMNQ96JQ2 1002 aa29.37■■■□□ 2.29
PLOD3-215ENST00000487563 SUGT1Q9Y2Z0 365 aa29.37■■■□□ 2.29
PLOD3-215ENST00000487563 MYH13Q9UKX3 1938 aa29.37■■■□□ 2.29
PLOD3-215ENST00000487563 TBC1D8O95759 1140 aa29.36■■■□□ 2.29
PLOD3-215ENST00000487563 IL15P40933 162 aaPredicted RBP29.36■■■□□ 2.29
PLOD3-215ENST00000487563 WDR66Q8TBY9 1149 aa29.36■■■□□ 2.29
PLOD3-215ENST00000487563 FRAT1Q92837 279 aaPredicted RBP29.36■■■□□ 2.29
PLOD3-215ENST00000487563 TMOD2Q9NZR1 351 aa29.36■■■□□ 2.29
PLOD3-215ENST00000487563 PA2G4Q9UQ80 394 aaKnown RBP29.36■■■□□ 2.29
PLOD3-215ENST00000487563 UNCXA6NJT0 531 aa29.35■■■□□ 2.29
PLOD3-215ENST00000487563 GNL3LQ9NVN8 582 aaKnown RBP29.35■■■□□ 2.29
PLOD3-215ENST00000487563 MANSC4A6NHS7 340 aaPredicted RBP29.34■■■□□ 2.29
PLOD3-215ENST00000487563 ZBTB48P10074 688 aaPredicted RBP29.34■■■□□ 2.29
PLOD3-215ENST00000487563 HNRNPUQ00839 825 aaKnown RBP eCLIP29.34■■■□□ 2.29
PLOD3-215ENST00000487563 ANKRD13AQ8IZ07 590 aa29.34■■■□□ 2.29
PLOD3-215ENST00000487563 WNK4Q96J92 1243 aa29.34■■■□□ 2.29
PLOD3-215ENST00000487563 USP2O75604 605 aaPredicted RBP29.33■■■□□ 2.29
PLOD3-215ENST00000487563 DIEXFQ68CQ4 756 aaKnown RBP29.33■■■□□ 2.29
PLOD3-215ENST00000487563 MIER1Q8N108 512 aa29.33■■■□□ 2.29
PLOD3-215ENST00000487563 ZDHHC15Q96MV8 337 aa29.33■■■□□ 2.29
PLOD3-215ENST00000487563 TMEM39BQ9GZU3 492 aa29.33■■■□□ 2.29
PLOD3-215ENST00000487563 TRIM27P14373 513 aa29.32■■■□□ 2.28
PLOD3-215ENST00000487563 CTU1Q7Z7A3 348 aaKnown RBP29.32■■■□□ 2.28
PLOD3-215ENST00000487563 COPRSQ9NQ92 184 aa29.32■■■□□ 2.28
PLOD3-215ENST00000487563 BCAR3O75815 825 aa29.31■■■□□ 2.28
PLOD3-215ENST00000487563 CACNB3P54284 484 aa29.31■■■□□ 2.28
PLOD3-215ENST00000487563 ATF7IPQ6VMQ6 1270 aa29.31■■■□□ 2.28
PLOD3-215ENST00000487563 MRIQ9BWK5 157 aa29.31■■■□□ 2.28
PLOD3-215ENST00000487563 SRGAP3O43295 1099 aa29.3■■■□□ 2.28
PLOD3-215ENST00000487563 ALDH1A1P00352 501 aa29.3■■■□□ 2.28
PLOD3-215ENST00000487563 INHBEP58166 350 aa29.3■■■□□ 2.28
PLOD3-215ENST00000487563 CDAN1Q8IWY9 1227 aa29.3■■■□□ 2.28
PLOD3-215ENST00000487563 TEPSINQ96N21 525 aa29.3■■■□□ 2.28
PLOD3-215ENST00000487563 HHIPL2Q6UWX4 724 aa29.29■■■□□ 2.28
PLOD3-215ENST00000487563 ZNF296Q8WUU4 475 aaPredicted RBP29.29■■■□□ 2.28
PLOD3-215ENST00000487563 CLUAP1Q96AJ1 413 aa29.29■■■□□ 2.28
PLOD3-215ENST00000487563 ELP3Q9H9T3 547 aa29.28■■■□□ 2.28
PLOD3-215ENST00000487563 TNNQ9UQP3 1299 aa29.28■■■□□ 2.28
PLOD3-215ENST00000487563 OTOFQ9HC10 1997 aa29.28■■■□□ 2.28
PLOD3-215ENST00000487563 GPR25O00155 361 aa29.27■■■□□ 2.28
PLOD3-215ENST00000487563 PHKA1P46020 1223 aa29.27■■■□□ 2.28
PLOD3-215ENST00000487563 APOBEC3HQ6NTF7 200 aaKnown RBP29.27■■■□□ 2.28
PLOD3-215ENST00000487563 DENND2AQ9ULE3 1009 aa29.27■■■□□ 2.28
PLOD3-215ENST00000487563 SEMA3EO15041 775 aa29.26■■■□□ 2.27
PLOD3-215ENST00000487563 IFNL1Q8IU54 200 aa29.26■■■□□ 2.27
PLOD3-215ENST00000487563 GNAI2P04899 355 aa29.25■■■□□ 2.27
PLOD3-215ENST00000487563 LDHBP07195 334 aaKnown RBP29.25■■■□□ 2.27
PLOD3-215ENST00000487563 MTX1Q13505 466 aa29.25■■■□□ 2.27
PLOD3-215ENST00000487563 NOM1Q5C9Z4 860 aaKnown RBP29.25■■■□□ 2.27
PLOD3-215ENST00000487563 FKBP1CQ5VVH2 108 aa29.25■■■□□ 2.27
PLOD3-215ENST00000487563 FAM83AQ86UY5 434 aa29.25■■■□□ 2.27
PLOD3-215ENST00000487563 OPTNQ96CV9 577 aa29.25■■■□□ 2.27
PLOD3-215ENST00000487563 CFHR5Q9BXR6 569 aa29.25■■■□□ 2.27
PLOD3-215ENST00000487563 CSADQ9Y600 493 aa29.25■■■□□ 2.27
PLOD3-215ENST00000487563 PRDX5P30044 214 aa29.24■■■□□ 2.27
PLOD3-215ENST00000487563 ADORA1P30542 326 aa29.24■■■□□ 2.27
PLOD3-215ENST00000487563 ZKSCAN2Q63HK3 967 aa29.24■■■□□ 2.27
PLOD3-215ENST00000487563 HOOK2Q96ED9 719 aa29.24■■■□□ 2.27
PLOD3-215ENST00000487563 AKAP2Q9Y2D5 859 aa29.24■■■□□ 2.27
PLOD3-215ENST00000487563 FKTNO75072 461 aa29.23■■■□□ 2.27
PLOD3-215ENST00000487563 GJA5P36382 358 aa29.23■■■□□ 2.27
PLOD3-215ENST00000487563 MAP3K9P80192 1104 aa29.23■■■□□ 2.27
PLOD3-215ENST00000487563 DIXDC1Q155Q3 683 aa29.23■■■□□ 2.27
PLOD3-215ENST00000487563 CCDC102BQ68D86 513 aa29.23■■■□□ 2.27
PLOD3-215ENST00000487563 OTUD7BQ6GQQ9 843 aa29.23■■■□□ 2.27
PLOD3-215ENST00000487563 LAMB1P07942 1786 aa29.22■■■□□ 2.27
PLOD3-215ENST00000487563 IGF2BP3O00425 579 aaKnown RBP eCLIP29.22■■■□□ 2.27
PLOD3-215ENST00000487563 TFCP2Q12800 502 aa29.22■■■□□ 2.27
PLOD3-215ENST00000487563 VGLL4Q14135 290 aa29.22■■■□□ 2.27
PLOD3-215ENST00000487563 PPP1R3FQ6ZSY5 799 aaPredicted RBP29.22■■■□□ 2.27
PLOD3-215ENST00000487563 DAGLAQ9Y4D2 1042 aa29.22■■■□□ 2.27
PLOD3-215ENST00000487563 SALL1Q9NSC2 1324 aa29.21■■■□□ 2.27
PLOD3-215ENST00000487563 A0A1B0GUL7 405 aa29.21■■■□□ 2.27
PLOD3-215ENST00000487563 TIMM10P62072 90 aa29.21■■■□□ 2.27
PLOD3-215ENST00000487563 PKN2Q16513 984 aaKnown RBP29.21■■■□□ 2.27
PLOD3-215ENST00000487563 ZGPATQ8N5A5 531 aaKnown RBP29.21■■■□□ 2.27
PLOD3-215ENST00000487563 DDX55Q8NHQ9 600 aaKnown RBP eCLIP29.21■■■□□ 2.27
PLOD3-215ENST00000487563 R3HDMLQ9H3Y0 253 aa29.21■■■□□ 2.27
PLOD3-215ENST00000487563 TMEM57Q8N5G2 664 aa29.2■■■□□ 2.26
PLOD3-215ENST00000487563 RPAP1Q9BWH6 1393 aaPredicted RBP29.2■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms