RNA–Protein interactions for RNA: ENST00000487558.1

CUL3-211, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 1,093 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-211ENST00000487558 Q6ZS46 218 aa8.98□□□□□ -0.97
CUL3-211ENST00000487558 SLC51AQ86UW1 340 aa8.98□□□□□ -0.97
CUL3-211ENST00000487558 MAP4K3Q8IVH8 894 aa8.98□□□□□ -0.97
CUL3-211ENST00000487558 SLC43A3Q8NBI5 491 aa8.98□□□□□ -0.97
CUL3-211ENST00000487558 SPACA7Q96KW9 195 aa8.98□□□□□ -0.97
CUL3-211ENST00000487558 LIN7BQ9HAP6 207 aa8.98□□□□□ -0.97
CUL3-211ENST00000487558 ZFYVE1Q9HBF4 777 aa8.98□□□□□ -0.97
CUL3-211ENST00000487558 CAPN10Q9HC96 672 aa8.98□□□□□ -0.97
CUL3-211ENST00000487558 LATS2Q9NRM7 1088 aa8.98□□□□□ -0.97
CUL3-211ENST00000487558 LOC105371045A0A1W2PR82 267 aa8.97□□□□□ -0.97
CUL3-211ENST00000487558 KIF4AO95239 1232 aa8.97□□□□□ -0.97
CUL3-211ENST00000487558 PRPF40BQ6NWY9 871 aaKnown RBP8.97□□□□□ -0.97
CUL3-211ENST00000487558 GLIS3Q8NEA6 775 aa8.97□□□□□ -0.97
CUL3-211ENST00000487558 KRTAP4-12Q9BQ66 201 aa8.97□□□□□ -0.97
CUL3-211ENST00000487558 ACBD3Q9H3P7 528 aa8.97□□□□□ -0.97
CUL3-211ENST00000487558 TTF2Q9UNY4 1162 aaKnown RBP8.97□□□□□ -0.97
CUL3-211ENST00000487558 TRIM33Q9UPN9 1127 aa8.97□□□□□ -0.97
CUL3-211ENST00000487558 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.97□□□□□ -0.97
CUL3-211ENST00000487558 FCGRTP55899 365 aa8.96□□□□□ -0.98
CUL3-211ENST00000487558 ZNF394Q53GI3 561 aa8.96□□□□□ -0.98
CUL3-211ENST00000487558 CACTIN-AS1Q8N1I8 211 aa8.96□□□□□ -0.98
CUL3-211ENST00000487558 OSMRQ99650 979 aa8.96□□□□□ -0.98
CUL3-211ENST00000487558 NOC4LQ9BVI4 516 aaKnown RBP8.96□□□□□ -0.98
CUL3-211ENST00000487558 RBSNQ9H1K0 784 aa8.96□□□□□ -0.98
CUL3-211ENST00000487558 PPP1R1BQ9UD71 204 aaPredicted RBP8.96□□□□□ -0.98
CUL3-211ENST00000487558 TMEM238LA0A1B0GVL6 79 aa8.95□□□□□ -0.98
CUL3-211ENST00000487558 FSTP19883 344 aa8.95□□□□□ -0.98
CUL3-211ENST00000487558 DTHD1Q6ZMT9 781 aa8.95□□□□□ -0.98
CUL3-211ENST00000487558 DCAF11Q8TEB1 546 aa8.95□□□□□ -0.98
CUL3-211ENST00000487558 UBXN4Q92575 508 aa8.95□□□□□ -0.98
CUL3-211ENST00000487558 TINF2Q9BSI4 451 aa8.95□□□□□ -0.98
CUL3-211ENST00000487558 PPM1HQ9ULR3 514 aa8.95□□□□□ -0.98
CUL3-211ENST00000487558 INPP5FQ9Y2H2 1132 aa8.95□□□□□ -0.98
CUL3-211ENST00000487558 RACK1P63244 317 aaKnown RBP8.94□□□□□ -0.98
CUL3-211ENST00000487558 COL13A1Q5TAT6 717 aaPredicted RBP8.94□□□□□ -0.98
CUL3-211ENST00000487558 VPS37DQ86XT2 251 aa8.94□□□□□ -0.98
CUL3-211ENST00000487558 CCNJLQ8IV13 435 aa8.94□□□□□ -0.98
CUL3-211ENST00000487558 CEP120Q8N960 986 aa8.94□□□□□ -0.98
CUL3-211ENST00000487558 C3orf58Q8NDZ4 430 aa8.94□□□□□ -0.98
CUL3-211ENST00000487558 ZKSCAN3Q9BRR0 538 aa8.94□□□□□ -0.98
CUL3-211ENST00000487558 MUC3BQ9H195 1237 aa8.94□□□□□ -0.98
CUL3-211ENST00000487558 AKAP2Q9Y2D5 859 aa8.94□□□□□ -0.98
CUL3-211ENST00000487558 PWP1Q13610 501 aa8.93□□□□□ -0.98
CUL3-211ENST00000487558 ERMP1Q7Z2K6 904 aa8.93□□□□□ -0.98
CUL3-211ENST00000487558 ANKRD24Q8TF21 1146 aa8.93□□□□□ -0.98
CUL3-211ENST00000487558 TCF12Q99081 682 aa8.93□□□□□ -0.98
CUL3-211ENST00000487558 TANGO6Q9C0B7 1094 aa8.93□□□□□ -0.98
CUL3-211ENST00000487558 ABCB6Q9NP58 842 aa8.93□□□□□ -0.98
CUL3-211ENST00000487558 DZANK1Q9NVP4 752 aa8.93□□□□□ -0.98
CUL3-211ENST00000487558 PPME1Q9Y570 386 aa8.93□□□□□ -0.98
CUL3-211ENST00000487558 PCDHGB7Q9Y5F8 929 aa8.93□□□□□ -0.98
CUL3-211ENST00000487558 TM4SF5O14894 197 aa8.92□□□□□ -0.98
CUL3-211ENST00000487558 RLBP1P12271 317 aa8.92□□□□□ -0.98
CUL3-211ENST00000487558 CCDC85BQ15834 202 aaPredicted RBP8.92□□□□□ -0.98
CUL3-211ENST00000487558 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.92□□□□□ -0.98
CUL3-211ENST00000487558 KRTAP1-3Q8IUG1 177 aa8.92□□□□□ -0.98
CUL3-211ENST00000487558 RELL1Q8IUW5 271 aa8.92□□□□□ -0.98
CUL3-211ENST00000487558 GALNT11Q8NCW6 608 aa8.92□□□□□ -0.98
CUL3-211ENST00000487558 RSRP1Q9BUV0 290 aa8.92□□□□□ -0.98
CUL3-211ENST00000487558 TNNI2P48788 182 aa8.91□□□□□ -0.98
CUL3-211ENST00000487558 AGGF1Q8N302 714 aaeCLIP8.91□□□□□ -0.98
CUL3-211ENST00000487558 TMEM102Q8N9M5 508 aaPredicted RBP8.91□□□□□ -0.98
CUL3-211ENST00000487558 PRKAG2Q9UGJ0 569 aa8.91□□□□□ -0.98
CUL3-211ENST00000487558 ATP2B1P20020 1258 aa8.9□□□□□ -0.98
CUL3-211ENST00000487558 ATP11AP98196 1134 aa8.9□□□□□ -0.98
CUL3-211ENST00000487558 SV2BQ7L1I2 683 aa8.9□□□□□ -0.98
CUL3-211ENST00000487558 UBL7Q96S82 380 aaPredicted RBP8.9□□□□□ -0.98
CUL3-211ENST00000487558 CEP44Q9C0F1 390 aa8.9□□□□□ -0.98
CUL3-211ENST00000487558 LINC01387J3KSC0 135 aa8.89□□□□□ -0.99
CUL3-211ENST00000487558 ACPPP15309 386 aa8.89□□□□□ -0.99
CUL3-211ENST00000487558 GLB1P16278 677 aa8.89□□□□□ -0.99
CUL3-211ENST00000487558 ARID5AQ03989 594 aa8.89□□□□□ -0.99
CUL3-211ENST00000487558 NXPE3Q969Y0 559 aa8.89□□□□□ -0.99
CUL3-211ENST00000487558 GMLQ99445 158 aa8.89□□□□□ -0.99
CUL3-211ENST00000487558 PBX4Q9BYU1 374 aa8.89□□□□□ -0.99
CUL3-211ENST00000487558 BHLHE41Q9C0J9 482 aaPredicted RBP8.89□□□□□ -0.99
CUL3-211ENST00000487558 COPRSQ9NQ92 184 aa8.89□□□□□ -0.99
CUL3-211ENST00000487558 A0A096LPE4 126 aa8.88□□□□□ -0.99
CUL3-211ENST00000487558 A0A1W2PPZ6 126 aa8.88□□□□□ -0.99
CUL3-211ENST00000487558 NFKBIEO00221 500 aa8.88□□□□□ -0.99
CUL3-211ENST00000487558 PDE2AO00408 941 aaPredicted RBP8.88□□□□□ -0.99
CUL3-211ENST00000487558 TRPA1O75762 1119 aa8.88□□□□□ -0.99
CUL3-211ENST00000487558 WISP1O95388 367 aa8.88□□□□□ -0.99
CUL3-211ENST00000487558 ITPKAP23677 461 aa8.88□□□□□ -0.99
CUL3-211ENST00000487558 DNAJA1P31689 397 aaKnown RBP8.88□□□□□ -0.99
CUL3-211ENST00000487558 CD97P48960 835 aa8.88□□□□□ -0.99
CUL3-211ENST00000487558 ADAMTSL4Q6UY14 1074 aa8.88□□□□□ -0.99
CUL3-211ENST00000487558 PCMTD2Q9NV79 361 aa8.88□□□□□ -0.99
CUL3-211ENST00000487558 KBTBD4Q9NVX7 518 aa8.88□□□□□ -0.99
CUL3-211ENST00000487558 KCNK4Q9NYG8 393 aa8.88□□□□□ -0.99
CUL3-211ENST00000487558 RAXQ9Y2V3 346 aa8.88□□□□□ -0.99
CUL3-211ENST00000487558 CDC27P30260 824 aa8.87□□□□□ -0.99
CUL3-211ENST00000487558 GRIA4P48058 902 aa8.87□□□□□ -0.99
CUL3-211ENST00000487558 RPS26P11Q5JNZ5 115 aaPredicted RBP8.87□□□□□ -0.99
CUL3-211ENST00000487558 CEP135Q66GS9 1140 aa8.87□□□□□ -0.99
CUL3-211ENST00000487558 TPTE2Q6XPS3 522 aa8.87□□□□□ -0.99
CUL3-211ENST00000487558 ASAP3Q8TDY4 903 aa8.87□□□□□ -0.99
CUL3-211ENST00000487558 SMNDC1O75940 238 aaKnown RBP eCLIP8.86□□□□□ -0.99
CUL3-211ENST00000487558 SSTR4P31391 388 aa8.86□□□□□ -0.99
CUL3-211ENST00000487558 GBP2P32456 591 aaPredicted RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms