RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 CFHR5Q9BXR6 569 aa15.3■□□□□ 0.04
VPS16-208ENST00000487461 NOB1Q9ULX3 412 aaKnown RBP15.3■□□□□ 0.04
VPS16-208ENST00000487461 TCP10L2B9ZVM9 353 aa15.29■□□□□ 0.04
VPS16-208ENST00000487461 EYA2O00167 538 aa15.29■□□□□ 0.04
VPS16-208ENST00000487461 FRAT2O75474 233 aaPredicted RBP15.29■□□□□ 0.04
VPS16-208ENST00000487461 ZBTB48P10074 688 aaPredicted RBP15.29■□□□□ 0.04
VPS16-208ENST00000487461 GJA5P36382 358 aa15.29■□□□□ 0.04
VPS16-208ENST00000487461 IREB2P48200 963 aaKnown RBP15.29■□□□□ 0.04
VPS16-208ENST00000487461 INHBEP58166 350 aa15.29■□□□□ 0.04
VPS16-208ENST00000487461 TNFAIP1Q13829 316 aa15.29■□□□□ 0.04
VPS16-208ENST00000487461 IFNL1Q8IU54 200 aa15.29■□□□□ 0.04
VPS16-208ENST00000487461 IFIT1P09914 478 aaKnown RBP15.28■□□□□ 0.04
VPS16-208ENST00000487461 HDLBPQ00341 1268 aaKnown RBP15.28■□□□□ 0.04
VPS16-208ENST00000487461 PUM3Q15397 648 aaKnown RBP15.28■□□□□ 0.04
VPS16-208ENST00000487461 PKN2Q16513 984 aaKnown RBP15.28■□□□□ 0.04
VPS16-208ENST00000487461 ATG9AQ7Z3C6 839 aa15.28■□□□□ 0.04
VPS16-208ENST00000487461 TBC1D22AQ8WUA7 517 aa15.28■□□□□ 0.04
VPS16-208ENST00000487461 MRIQ9BWK5 157 aa15.28■□□□□ 0.04
VPS16-208ENST00000487461 TMEM39BQ9GZU3 492 aa15.28■□□□□ 0.04
VPS16-208ENST00000487461 PCDH10Q9P2E7 1040 aa15.28■□□□□ 0.04
VPS16-208ENST00000487461 HPS5Q9UPZ3 1129 aa15.28■□□□□ 0.04
VPS16-208ENST00000487461 IGF2BP3O00425 579 aaKnown RBP eCLIP15.27■□□□□ 0.04
VPS16-208ENST00000487461 FKTNO75072 461 aa15.27■□□□□ 0.04
VPS16-208ENST00000487461 ALDH1A1P00352 501 aa15.27■□□□□ 0.04
VPS16-208ENST00000487461 SOX10P56693 466 aa15.27■□□□□ 0.04
VPS16-208ENST00000487461 ANKRD13AQ8IZ07 590 aa15.27■□□□□ 0.04
VPS16-208ENST00000487461 ECM29Q5VYK3 1845 aa15.27■□□□□ 0.03
VPS16-208ENST00000487461 KIF16BQ96L93 1317 aa15.26■□□□□ 0.03
VPS16-208ENST00000487461 CT47B1P0C2W7 299 aaPredicted RBP15.26■□□□□ 0.03
VPS16-208ENST00000487461 UBTFL1P0CB47 393 aaPredicted RBP15.26■□□□□ 0.03
VPS16-208ENST00000487461 CACNB3P54284 484 aa15.26■□□□□ 0.03
VPS16-208ENST00000487461 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.26■□□□□ 0.03
VPS16-208ENST00000487461 LPIN2Q92539 896 aa15.26■□□□□ 0.03
VPS16-208ENST00000487461 ZDHHC15Q96MV8 337 aa15.26■□□□□ 0.03
VPS16-208ENST00000487461 SLC5A1P13866 664 aa15.25■□□□□ 0.03
VPS16-208ENST00000487461 TNNI2P48788 182 aa15.25■□□□□ 0.03
VPS16-208ENST00000487461 MAP3K9P80192 1104 aa15.25■□□□□ 0.03
VPS16-208ENST00000487461 APOBEC3HQ6NTF7 200 aaKnown RBP15.25■□□□□ 0.03
VPS16-208ENST00000487461 TEKT1Q969V4 418 aa15.25■□□□□ 0.03
VPS16-208ENST00000487461 PTPN18Q99952 460 aa15.25■□□□□ 0.03
VPS16-208ENST00000487461 ELP3Q9H9T3 547 aa15.25■□□□□ 0.03
VPS16-208ENST00000487461 TESPA1A2RU30 521 aaPredicted RBP15.24■□□□□ 0.03
VPS16-208ENST00000487461 CCER2I3L3R5 266 aa15.24■□□□□ 0.03
VPS16-208ENST00000487461 CNKSR2Q8WXI2 1034 aa15.24■□□□□ 0.03
VPS16-208ENST00000487461 OPTNQ96CV9 577 aa15.24■□□□□ 0.03
VPS16-208ENST00000487461 API5Q9BZZ5 524 aaKnown RBP15.24■□□□□ 0.03
VPS16-208ENST00000487461 SIL1Q9H173 461 aa15.24■□□□□ 0.03
VPS16-208ENST00000487461 SUGT1Q9Y2Z0 365 aa15.24■□□□□ 0.03
VPS16-208ENST00000487461 CIAO1O76071 339 aa15.23■□□□□ 0.03
VPS16-208ENST00000487461 RARSP54136 660 aaKnown RBP15.23■□□□□ 0.03
VPS16-208ENST00000487461 FBXO46Q6PJ61 603 aaPredicted RBP15.23■□□□□ 0.03
VPS16-208ENST00000487461 HHIPL2Q6UWX4 724 aa15.23■□□□□ 0.03
VPS16-208ENST00000487461 MS4A4AQ96JQ5 239 aa15.23■□□□□ 0.03
VPS16-208ENST00000487461 FBXO3Q9UK99 471 aa15.23■□□□□ 0.03
VPS16-208ENST00000487461 PA2G4Q9UQ80 394 aaKnown RBP15.23■□□□□ 0.03
VPS16-208ENST00000487461 LRRFIP2Q9Y608 721 aaKnown RBP15.23■□□□□ 0.03
VPS16-208ENST00000487461 CRHR2Q13324 411 aa15.22■□□□□ 0.03
VPS16-208ENST00000487461 VGLL4Q14135 290 aa15.22■□□□□ 0.03
VPS16-208ENST00000487461 OTUD7BQ6GQQ9 843 aa15.22■□□□□ 0.03
VPS16-208ENST00000487461 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.22■□□□□ 0.03
VPS16-208ENST00000487461 WDR66Q8TBY9 1149 aa15.22■□□□□ 0.03
VPS16-208ENST00000487461 MEIS3Q99687 375 aa15.22■□□□□ 0.03
VPS16-208ENST00000487461 CEP126Q9P2H0 1117 aa15.22■□□□□ 0.03
VPS16-208ENST00000487461 MAST3O60307 1309 aa15.21■□□□□ 0.03
VPS16-208ENST00000487461 ATP2B3Q16720 1220 aa15.21■□□□□ 0.03
VPS16-208ENST00000487461 FKBP1CQ5VVH2 108 aa15.21■□□□□ 0.03
VPS16-208ENST00000487461 FAM83AQ86UY5 434 aa15.21■□□□□ 0.03
VPS16-208ENST00000487461 IL15P40933 162 aaPredicted RBP15.2■□□□□ 0.02
VPS16-208ENST00000487461 BRI3BPQ8WY22 251 aa15.2■□□□□ 0.02
VPS16-208ENST00000487461 ARHGAP45Q92619 1136 aa15.2■□□□□ 0.02
VPS16-208ENST00000487461 COPRSQ9NQ92 184 aa15.2■□□□□ 0.02
VPS16-208ENST00000487461 TMOD2Q9NZR1 351 aa15.2■□□□□ 0.02
VPS16-208ENST00000487461 HDAC5Q9UQL6 1122 aa15.2■□□□□ 0.02
VPS16-208ENST00000487461 TRIM17Q9Y577 477 aa15.2■□□□□ 0.02
VPS16-208ENST00000487461 CSADQ9Y600 493 aa15.2■□□□□ 0.02
VPS16-208ENST00000487461 ARAP2Q8WZ64 1704 aa15.2■□□□□ 0.02
VPS16-208ENST00000487461 PRDX5P30044 214 aa15.19■□□□□ 0.02
VPS16-208ENST00000487461 PHKA1P46020 1223 aa15.19■□□□□ 0.02
VPS16-208ENST00000487461 DIXDC1Q155Q3 683 aa15.19■□□□□ 0.02
VPS16-208ENST00000487461 INTS3Q68E01 1043 aaKnown RBP15.19■□□□□ 0.02
VPS16-208ENST00000487461 OTOP1Q7RTM1 612 aa15.19■□□□□ 0.02
VPS16-208ENST00000487461 ZKSCAN4Q969J2 545 aaPredicted RBP15.19■□□□□ 0.02
VPS16-208ENST00000487461 OTUD5Q96G74 571 aa15.19■□□□□ 0.02
VPS16-208ENST00000487461 GNL3LQ9NVN8 582 aaKnown RBP15.19■□□□□ 0.02
VPS16-208ENST00000487461 DAGLAQ9Y4D2 1042 aa15.19■□□□□ 0.02
VPS16-208ENST00000487461 CCL15-CCL14A0A0B4J2E2 113 aa15.18■□□□□ 0.02
VPS16-208ENST00000487461 ADORA1P30542 326 aa15.18■□□□□ 0.02
VPS16-208ENST00000487461 GTF2A2P52657 109 aa15.18■□□□□ 0.02
VPS16-208ENST00000487461 CAP1Q01518 475 aa15.18■□□□□ 0.02
VPS16-208ENST00000487461 CCL15Q16663 113 aa15.18■□□□□ 0.02
VPS16-208ENST00000487461 CDC42EP5Q6NZY7 148 aa15.18■□□□□ 0.02
VPS16-208ENST00000487461 MIGA2Q7L4E1 593 aa15.18■□□□□ 0.02
VPS16-208ENST00000487461 CD99L2Q8TCZ2 262 aa15.18■□□□□ 0.02
VPS16-208ENST00000487461 FAM151AQ8WW52 585 aa15.18■□□□□ 0.02
VPS16-208ENST00000487461 SNCAIPQ9Y6H5 919 aa15.18■□□□□ 0.02
VPS16-208ENST00000487461 SPDYE5A6NIY4 337 aa15.17■□□□□ 0.02
VPS16-208ENST00000487461 LDHBP07195 334 aaKnown RBP15.17■□□□□ 0.02
VPS16-208ENST00000487461 TIMM10P62072 90 aa15.17■□□□□ 0.02
VPS16-208ENST00000487461 SP3Q02447 781 aa15.17■□□□□ 0.02
VPS16-208ENST00000487461 TCP10Q12799 353 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms