RNA–Protein interactions for RNA: ENST00000487193.1

ATPAF1-205, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 513 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-205ENST00000487193 SEMA6BQ9H3T3 888 aa15.97■□□□□ 0.15
ATPAF1-205ENST00000487193 PAK6Q9NQU5 681 aaPredicted RBP15.97■□□□□ 0.15
ATPAF1-205ENST00000487193 TSPYL4Q9UJ04 414 aa15.97■□□□□ 0.15
ATPAF1-205ENST00000487193 LAMA2P24043 3122 aaKnown RBP15.96■□□□□ 0.15
ATPAF1-205ENST00000487193 IRF6O14896 467 aa15.96■□□□□ 0.15
ATPAF1-205ENST00000487193 CERS5Q8N5B7 392 aa15.96■□□□□ 0.15
ATPAF1-205ENST00000487193 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.96■□□□□ 0.15
ATPAF1-205ENST00000487193 NBPF3Q9H094 633 aa15.96■□□□□ 0.15
ATPAF1-205ENST00000487193 TAOK2Q9UL54 1235 aa15.96■□□□□ 0.15
ATPAF1-205ENST00000487193 MINPP1Q9UNW1 487 aa15.96■□□□□ 0.15
ATPAF1-205ENST00000487193 MGAMO43451 1857 aa15.96■□□□□ 0.15
ATPAF1-205ENST00000487193 FAM205AQ6ZU69 1335 aa15.95■□□□□ 0.14
ATPAF1-205ENST00000487193 SPDYE5A6NIY4 337 aa15.95■□□□□ 0.14
ATPAF1-205ENST00000487193 PDHXO00330 501 aa15.95■□□□□ 0.14
ATPAF1-205ENST00000487193 PER1O15534 1290 aaPredicted RBP15.95■□□□□ 0.14
ATPAF1-205ENST00000487193 TTC28Q96AY4 2481 aa15.95■□□□□ 0.14
ATPAF1-205ENST00000487193 ADGRA2Q96PE1 1338 aa15.94■□□□□ 0.14
ATPAF1-205ENST00000487193 FOSL2P15408 326 aa15.94■□□□□ 0.14
ATPAF1-205ENST00000487193 KLRK1P26718 216 aa15.94■□□□□ 0.14
ATPAF1-205ENST00000487193 FLT3LGP49771 235 aa15.94■□□□□ 0.14
ATPAF1-205ENST00000487193 ZBTB38Q8NAP3 1195 aaPredicted RBP15.94■□□□□ 0.14
ATPAF1-205ENST00000487193 C11orf49Q9H6J7 331 aa15.94■□□□□ 0.14
ATPAF1-205ENST00000487193 ERO1BQ86YB8 467 aa15.93■□□□□ 0.14
ATPAF1-205ENST00000487193 ANKLE1Q8NAG6 615 aa15.93■□□□□ 0.14
ATPAF1-205ENST00000487193 ZKSCAN4Q969J2 545 aaPredicted RBP15.93■□□□□ 0.14
ATPAF1-205ENST00000487193 SNCAIPQ9Y6H5 919 aa15.93■□□□□ 0.14
ATPAF1-205ENST00000487193 SPEF2Q9C093 1822 aa15.93■□□□□ 0.14
ATPAF1-205ENST00000487193 TCP10L2B9ZVM9 353 aa15.92■□□□□ 0.14
ATPAF1-205ENST00000487193 PDE8AO60658 829 aa15.92■□□□□ 0.14
ATPAF1-205ENST00000487193 HSP90B1P14625 803 aaKnown RBP15.92■□□□□ 0.14
ATPAF1-205ENST00000487193 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.92■□□□□ 0.14
ATPAF1-205ENST00000487193 PXYLP1Q8TE99 480 aa15.92■□□□□ 0.14
ATPAF1-205ENST00000487193 TEPSINQ96N21 525 aa15.92■□□□□ 0.14
ATPAF1-205ENST00000487193 TMEM39BQ9GZU3 492 aa15.92■□□□□ 0.14
ATPAF1-205ENST00000487193 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.92■□□□□ 0.14
ATPAF1-205ENST00000487193 TNFAIP1Q13829 316 aa15.91■□□□□ 0.14
ATPAF1-205ENST00000487193 ANKRD23Q86SG2 305 aa15.91■□□□□ 0.14
ATPAF1-205ENST00000487193 CHPF2Q9P2E5 772 aa15.91■□□□□ 0.14
ATPAF1-205ENST00000487193 ZNF70Q9UC06 446 aaPredicted RBP15.91■□□□□ 0.14
ATPAF1-205ENST00000487193 DDX60LQ5H9U9 1706 aaKnown RBP15.91■□□□□ 0.14
ATPAF1-205ENST00000487193 NEFMP07197 916 aa15.9■□□□□ 0.14
ATPAF1-205ENST00000487193 PPIL2Q13356 520 aa15.9■□□□□ 0.14
ATPAF1-205ENST00000487193 SNX27Q96L92 541 aa15.9■□□□□ 0.14
ATPAF1-205ENST00000487193 CDC5LQ99459 802 aaKnown RBP15.9■□□□□ 0.14
ATPAF1-205ENST00000487193 TDRD3Q9H7E2 651 aaKnown RBP15.9■□□□□ 0.14
ATPAF1-205ENST00000487193 BSDC1Q9NW68 430 aaPredicted RBP15.9■□□□□ 0.14
ATPAF1-205ENST00000487193 LEMD3Q9Y2U8 911 aa15.9■□□□□ 0.14
ATPAF1-205ENST00000487193 COL2A1P02458 1487 aaPredicted RBP15.9■□□□□ 0.14
ATPAF1-205ENST00000487193 TRIM28Q13263 835 aaKnown RBP15.89■□□□□ 0.13
ATPAF1-205ENST00000487193 WRNIP1Q96S55 665 aa15.89■□□□□ 0.13
ATPAF1-205ENST00000487193 CD209Q9NNX6 404 aa15.89■□□□□ 0.13
ATPAF1-205ENST00000487193 JAG2Q9Y219 1238 aa15.89■□□□□ 0.13
ATPAF1-205ENST00000487193 CYP2C8P10632 490 aa15.88■□□□□ 0.13
ATPAF1-205ENST00000487193 BCRP11274 1271 aa15.88■□□□□ 0.13
ATPAF1-205ENST00000487193 SPDYE2Q495Y8 402 aa15.88■□□□□ 0.13
ATPAF1-205ENST00000487193 USP38Q8NB14 1042 aa15.88■□□□□ 0.13
ATPAF1-205ENST00000487193 TTYH1Q9H313 450 aaPredicted RBP15.88■□□□□ 0.13
ATPAF1-205ENST00000487193 SYNGAP1Q96PV0 1343 aa15.88■□□□□ 0.13
ATPAF1-205ENST00000487193 TNPO2O14787 897 aaKnown RBP15.87■□□□□ 0.13
ATPAF1-205ENST00000487193 LBHD1Q9BQE6 289 aaPredicted RBP15.87■□□□□ 0.13
ATPAF1-205ENST00000487193 IRF5Q13568 498 aa15.86■□□□□ 0.13
ATPAF1-205ENST00000487193 KRT24Q2M2I5 525 aa15.86■□□□□ 0.13
ATPAF1-205ENST00000487193 ALYREFQ86V81 257 aaKnown RBP15.86■□□□□ 0.13
ATPAF1-205ENST00000487193 PFASO15067 1338 aa15.86■□□□□ 0.13
ATPAF1-205ENST00000487193 PCCAP05165 728 aaPredicted RBP15.85■□□□□ 0.13
ATPAF1-205ENST00000487193 KCNJ4P48050 445 aa15.85■□□□□ 0.13
ATPAF1-205ENST00000487193 TNNI2P48788 182 aa15.85■□□□□ 0.13
ATPAF1-205ENST00000487193 PPATQ06203 517 aa15.85■□□□□ 0.13
ATPAF1-205ENST00000487193 NFE2L2Q16236 605 aa15.85■□□□□ 0.13
ATPAF1-205ENST00000487193 RIC3Q7Z5B4 369 aa15.85■□□□□ 0.13
ATPAF1-205ENST00000487193 PARK7Q99497 189 aaKnown RBP15.85■□□□□ 0.13
ATPAF1-205ENST00000487193 MYD88Q99836 296 aa15.85■□□□□ 0.13
ATPAF1-205ENST00000487193 CDH23Q9H251 3354 aa15.84■□□□□ 0.13
ATPAF1-205ENST00000487193 LRRC26Q2I0M4 334 aa15.84■□□□□ 0.13
ATPAF1-205ENST00000487193 ADAMTS19Q8TE59 1207 aa15.84■□□□□ 0.13
ATPAF1-205ENST00000487193 GREM2Q9H772 168 aa15.84■□□□□ 0.13
ATPAF1-205ENST00000487193 HMX1Q9NP08 348 aaPredicted RBP15.84■□□□□ 0.13
ATPAF1-205ENST00000487193 HCN4Q9Y3Q4 1203 aa15.84■□□□□ 0.13
ATPAF1-205ENST00000487193 TRIM32Q13049 653 aa15.83■□□□□ 0.12
ATPAF1-205ENST00000487193 MOGSQ13724 837 aa15.83■□□□□ 0.12
ATPAF1-205ENST00000487193 PPM1EQ8WY54 764 aa15.83■□□□□ 0.12
ATPAF1-205ENST00000487193 UHRF1Q96T88 793 aaPredicted RBP15.83■□□□□ 0.12
ATPAF1-205ENST00000487193 ARAP2Q8WZ64 1704 aa15.82■□□□□ 0.12
ATPAF1-205ENST00000487193 SNAP23O00161 211 aa15.82■□□□□ 0.12
ATPAF1-205ENST00000487193 CTSWP56202 376 aa15.82■□□□□ 0.12
ATPAF1-205ENST00000487193 SHHQ15465 462 aa15.82■□□□□ 0.12
ATPAF1-205ENST00000487193 DZIP1LQ8IYY4 767 aaKnown RBP15.82■□□□□ 0.12
ATPAF1-205ENST00000487193 TTLL11Q8NHH1 800 aa15.82■□□□□ 0.12
ATPAF1-205ENST00000487193 C1QTNF1Q9BXJ1 281 aa15.82■□□□□ 0.12
ATPAF1-205ENST00000487193 ANKRD2Q9GZV1 360 aa15.82■□□□□ 0.12
ATPAF1-205ENST00000487193 OGDHLQ9ULD0 1010 aa15.82■□□□□ 0.12
ATPAF1-205ENST00000487193 IGHMBP2P38935 993 aaKnown RBP15.81■□□□□ 0.12
ATPAF1-205ENST00000487193 HDGFL1Q5TGJ6 251 aa15.81■□□□□ 0.12
ATPAF1-205ENST00000487193 GPAT2Q6NUI2 795 aa15.81■□□□□ 0.12
ATPAF1-205ENST00000487193 DOCK3Q8IZD9 2030 aa15.81■□□□□ 0.12
ATPAF1-205ENST00000487193 COA7Q96BR5 231 aa15.81■□□□□ 0.12
ATPAF1-205ENST00000487193 ARIH1Q9Y4X5 557 aaPredicted RBP15.81■□□□□ 0.12
ATPAF1-205ENST00000487193 INPP5BP32019 993 aa15.8■□□□□ 0.12
ATPAF1-205ENST00000487193 CACNB3P54284 484 aa15.8■□□□□ 0.12
ATPAF1-205ENST00000487193 FKBP1AP62942 108 aaKnown RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms