RNA–Protein interactions for RNA: ENST00000487055.1

KIF3A-206, Transcript of kinesin family member 3A, humanhuman

TSL 3

Gene KIF3A, Length 731 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3A-206ENST00000487055 IFT57Q9NWB7 429 aa7.41□□□□□ -1.22
KIF3A-206ENST00000487055 WWC3Q9ULE0 1092 aa7.41□□□□□ -1.22
KIF3A-206ENST00000487055 KIF4AO95239 1232 aa7.4□□□□□ -1.22
KIF3A-206ENST00000487055 ATP2B2Q01814 1243 aa7.4□□□□□ -1.22
KIF3A-206ENST00000487055 EHHADHQ08426 723 aa7.4□□□□□ -1.22
KIF3A-206ENST00000487055 NFE2L2Q16236 605 aa7.4□□□□□ -1.22
KIF3A-206ENST00000487055 RSPO4Q2I0M5 234 aaPredicted RBP7.4□□□□□ -1.22
KIF3A-206ENST00000487055 NKAPLQ5M9Q1 402 aa7.4□□□□□ -1.22
KIF3A-206ENST00000487055 SHISA2Q6UWI4 295 aa7.4□□□□□ -1.22
KIF3A-206ENST00000487055 XKR5Q6UX68 686 aa7.4□□□□□ -1.22
KIF3A-206ENST00000487055 ZNF438Q7Z4V0 828 aa7.4□□□□□ -1.22
KIF3A-206ENST00000487055 IL22RA1Q8N6P7 574 aa7.4□□□□□ -1.22
KIF3A-206ENST00000487055 EIF4G1Q04637 1599 aaKnown RBP7.4□□□□□ -1.22
KIF3A-206ENST00000487055 XRCC5P13010 732 aaKnown RBP7.39□□□□□ -1.23
KIF3A-206ENST00000487055 NPR3P17342 541 aa7.39□□□□□ -1.23
KIF3A-206ENST00000487055 MPSTP25325 297 aa7.39□□□□□ -1.23
KIF3A-206ENST00000487055 MZF1P28698 734 aaPredicted RBP7.39□□□□□ -1.23
KIF3A-206ENST00000487055 EIF1AXP47813 144 aaKnown RBP7.39□□□□□ -1.23
KIF3A-206ENST00000487055 ZNF394Q53GI3 561 aa7.39□□□□□ -1.23
KIF3A-206ENST00000487055 VPS37DQ86XT2 251 aa7.39□□□□□ -1.23
KIF3A-206ENST00000487055 ZNF654Q8IZM8 581 aa7.39□□□□□ -1.23
KIF3A-206ENST00000487055 EDEM1Q92611 657 aa7.39□□□□□ -1.23
KIF3A-206ENST00000487055 IRF2BPLQ9H1B7 796 aa7.39□□□□□ -1.23
KIF3A-206ENST00000487055 DDX41Q9UJV9 622 aaKnown RBP7.39□□□□□ -1.23
KIF3A-206ENST00000487055 PCDHGB7Q9Y5F8 929 aa7.39□□□□□ -1.23
KIF3A-206ENST00000487055 FAM177BA6PVY3 158 aa7.38□□□□□ -1.23
KIF3A-206ENST00000487055 DLL1O00548 723 aa7.38□□□□□ -1.23
KIF3A-206ENST00000487055 DEAF1O75398 565 aaPredicted RBP7.38□□□□□ -1.23
KIF3A-206ENST00000487055 PDGFAP04085 211 aa7.38□□□□□ -1.23
KIF3A-206ENST00000487055 FGRP09769 529 aa7.38□□□□□ -1.23
KIF3A-206ENST00000487055 H2AFB1P0C5Y9 115 aa7.38□□□□□ -1.23
KIF3A-206ENST00000487055 H2AFB2P0C5Z0 115 aa7.38□□□□□ -1.23
KIF3A-206ENST00000487055 DNM1Q05193 864 aaKnown RBP7.38□□□□□ -1.23
KIF3A-206ENST00000487055 ATCAYQ86WG3 371 aa7.38□□□□□ -1.23
KIF3A-206ENST00000487055 NCAPG2Q86XI2 1143 aa7.38□□□□□ -1.23
KIF3A-206ENST00000487055 SETDB2Q96T68 719 aa7.38□□□□□ -1.23
KIF3A-206ENST00000487055 GABBR1Q9UBS5 961 aa7.38□□□□□ -1.23
KIF3A-206ENST00000487055 G3BP2Q9UN86 482 aaKnown RBP7.38□□□□□ -1.23
KIF3A-206ENST00000487055 DYRK3O43781 588 aa7.37□□□□□ -1.23
KIF3A-206ENST00000487055 DNAJC6O75061 913 aa7.37□□□□□ -1.23
KIF3A-206ENST00000487055 USP5P45974 858 aa7.37□□□□□ -1.23
KIF3A-206ENST00000487055 RACK1P63244 317 aaKnown RBP7.37□□□□□ -1.23
KIF3A-206ENST00000487055 SMC5Q8IY18 1101 aa7.37□□□□□ -1.23
KIF3A-206ENST00000487055 RPUSD2Q8IZ73 545 aaKnown RBP7.37□□□□□ -1.23
KIF3A-206ENST00000487055 PMEPA1Q969W9 287 aa7.37□□□□□ -1.23
KIF3A-206ENST00000487055 DMRTB1Q96MA1 342 aa7.37□□□□□ -1.23
KIF3A-206ENST00000487055 CITED4Q96RK1 184 aa7.37□□□□□ -1.23
KIF3A-206ENST00000487055 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.37□□□□□ -1.23
KIF3A-206ENST00000487055 MRPL18Q9H0U6 180 aaKnown RBP7.37□□□□□ -1.23
KIF3A-206ENST00000487055 TRIM33Q9UPN9 1127 aa7.37□□□□□ -1.23
KIF3A-206ENST00000487055 ENPP3O14638 875 aa7.36□□□□□ -1.23
KIF3A-206ENST00000487055 S100BP04271 92 aaPredicted RBP7.36□□□□□ -1.23
KIF3A-206ENST00000487055 COL13A1Q5TAT6 717 aaPredicted RBP7.36□□□□□ -1.23
KIF3A-206ENST00000487055 CEP135Q66GS9 1140 aa7.36□□□□□ -1.23
KIF3A-206ENST00000487055 PMM1Q92871 262 aa7.36□□□□□ -1.23
KIF3A-206ENST00000487055 PBX4Q9BYU1 374 aa7.36□□□□□ -1.23
KIF3A-206ENST00000487055 SPC25Q9HBM1 224 aa7.36□□□□□ -1.23
KIF3A-206ENST00000487055 TMEM63CQ9P1W3 806 aa7.36□□□□□ -1.23
KIF3A-206ENST00000487055 CC2D2AQ9P2K1 1620 aa7.36□□□□□ -1.23
KIF3A-206ENST00000487055 CECR2Q9BXF3 1484 aa7.36□□□□□ -1.23
KIF3A-206ENST00000487055 CES1P23141 567 aa7.35□□□□□ -1.23
KIF3A-206ENST00000487055 CDC27P30260 824 aa7.35□□□□□ -1.23
KIF3A-206ENST00000487055 ATP11AP98196 1134 aa7.35□□□□□ -1.23
KIF3A-206ENST00000487055 AAMPQ13685 434 aa7.35□□□□□ -1.23
KIF3A-206ENST00000487055 C8orf34Q49A92 452 aa7.35□□□□□ -1.23
KIF3A-206ENST00000487055 FAM117BQ6P1L5 589 aa7.35□□□□□ -1.23
KIF3A-206ENST00000487055 USP48Q86UV5 1035 aa7.35□□□□□ -1.23
KIF3A-206ENST00000487055 CCDC146Q8IYE0 955 aa7.35□□□□□ -1.23
KIF3A-206ENST00000487055 TMEM130Q8N3G9 435 aa7.35□□□□□ -1.23
KIF3A-206ENST00000487055 CEP120Q8N960 986 aa7.35□□□□□ -1.23
KIF3A-206ENST00000487055 WFDC12Q8WWY7 111 aa7.35□□□□□ -1.23
KIF3A-206ENST00000487055 SSBP4Q9BWG4 385 aaPredicted RBP7.35□□□□□ -1.23
KIF3A-206ENST00000487055 DDX56Q9NY93 547 aaKnown RBP7.35□□□□□ -1.23
KIF3A-206ENST00000487055 U2SURPO15042 1029 aaKnown RBP7.34□□□□□ -1.23
KIF3A-206ENST00000487055 GPR182O15218 404 aa7.34□□□□□ -1.23
KIF3A-206ENST00000487055 CYP2E1P05181 493 aaPredicted RBP7.34□□□□□ -1.23
KIF3A-206ENST00000487055 PTPRAP18433 802 aa7.34□□□□□ -1.23
KIF3A-206ENST00000487055 SETDB1Q15047 1291 aa7.34□□□□□ -1.23
KIF3A-206ENST00000487055 APBB1IPQ7Z5R6 666 aaPredicted RBP7.34□□□□□ -1.23
KIF3A-206ENST00000487055 CKAP2LQ8IYA6 745 aa7.34□□□□□ -1.23
KIF3A-206ENST00000487055 TP53INP1Q96A56 240 aa7.34□□□□□ -1.23
KIF3A-206ENST00000487055 CRELD1Q96HD1 420 aa7.34□□□□□ -1.23
KIF3A-206ENST00000487055 RASSF4Q9H2L5 321 aa7.34□□□□□ -1.23
KIF3A-206ENST00000487055 AKTIPQ9H8T0 292 aa7.34□□□□□ -1.23
KIF3A-206ENST00000487055 CCDC87Q9NVE4 849 aa7.34□□□□□ -1.23
KIF3A-206ENST00000487055 EIF3JO75822 258 aaKnown RBP7.33□□□□□ -1.24
KIF3A-206ENST00000487055 IGHA2P01877 340 aa7.33□□□□□ -1.24
KIF3A-206ENST00000487055 ITGB7P26010 798 aa7.33□□□□□ -1.24
KIF3A-206ENST00000487055 NOS3P29474 1203 aa7.33□□□□□ -1.24
KIF3A-206ENST00000487055 GNA15P30679 374 aa7.33□□□□□ -1.24
KIF3A-206ENST00000487055 IREB2P48200 963 aaKnown RBP7.33□□□□□ -1.24
KIF3A-206ENST00000487055 HSP90AB4PQ58FF6 505 aa7.33□□□□□ -1.24
KIF3A-206ENST00000487055 CCAR1Q8IX12 1150 aaKnown RBP7.33□□□□□ -1.24
KIF3A-206ENST00000487055 SNX29Q8TEQ0 813 aa7.33□□□□□ -1.24
KIF3A-206ENST00000487055 STAG1Q8WVM7 1258 aa7.33□□□□□ -1.24
KIF3A-206ENST00000487055 LACRTQ9GZZ8 138 aa7.33□□□□□ -1.24
KIF3A-206ENST00000487055 GGNBP2Q9H3C7 697 aa7.33□□□□□ -1.24
KIF3A-206ENST00000487055 SALL4Q9UJQ4 1053 aa7.33□□□□□ -1.24
KIF3A-206ENST00000487055 POLIQ9UNA4 740 aa7.33□□□□□ -1.24
KIF3A-206ENST00000487055 PNMA6FA0A0J9YX94 578 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms