RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 DZIP1LQ8IYY4 767 aaKnown RBP8.05□□□□□ -1.12
COPS3-209ENST00000486810 UBL7Q96S82 380 aaPredicted RBP8.05□□□□□ -1.12
COPS3-209ENST00000486810 C12orf49Q9H741 205 aa8.05□□□□□ -1.12
COPS3-209ENST00000486810 RSPO4Q2I0M5 234 aaPredicted RBP8.04□□□□□ -1.12
COPS3-209ENST00000486810 TMCO4Q5TGY1 634 aa8.04□□□□□ -1.12
COPS3-209ENST00000486810 FURINP09958 794 aa8.03□□□□□ -1.12
COPS3-209ENST00000486810 GNA15P30679 374 aa8.03□□□□□ -1.12
COPS3-209ENST00000486810 NKAPLQ5M9Q1 402 aa8.03□□□□□ -1.12
COPS3-209ENST00000486810 USP26Q9BXU7 913 aa8.03□□□□□ -1.12
COPS3-209ENST00000486810 PARP2Q9UGN5 583 aa8.03□□□□□ -1.12
COPS3-209ENST00000486810 SPG7Q9UQ90 795 aa8.03□□□□□ -1.12
COPS3-209ENST00000486810 AKAP2Q9Y2D5 859 aa8.03□□□□□ -1.12
COPS3-209ENST00000486810 GIPC1O14908 333 aa8.02□□□□□ -1.13
COPS3-209ENST00000486810 USP17L7P0C7H9 530 aa8.02□□□□□ -1.13
COPS3-209ENST00000486810 XRCC5P13010 732 aaKnown RBP8.02□□□□□ -1.13
COPS3-209ENST00000486810 ERCC3P19447 782 aa8.02□□□□□ -1.13
COPS3-209ENST00000486810 STK35Q8TDR2 534 aa8.02□□□□□ -1.13
COPS3-209ENST00000486810 FAM161BQ96MY7 647 aa8.02□□□□□ -1.13
COPS3-209ENST00000486810 TMPRSS13Q9BYE2 586 aa8.02□□□□□ -1.13
COPS3-209ENST00000486810 SRCIN1Q9C0H9 1055 aa8.02□□□□□ -1.13
COPS3-209ENST00000486810 PPP4R2Q9NY27 417 aa8.02□□□□□ -1.13
COPS3-209ENST00000486810 MEGF11A6BM72 1044 aa8.01□□□□□ -1.13
COPS3-209ENST00000486810 ITGB7P26010 798 aa8.01□□□□□ -1.13
COPS3-209ENST00000486810 MAOBP27338 520 aa8.01□□□□□ -1.13
COPS3-209ENST00000486810 GSTT1P30711 240 aa8.01□□□□□ -1.13
COPS3-209ENST00000486810 MFAP1P55081 439 aaKnown RBP8.01□□□□□ -1.13
COPS3-209ENST00000486810 DAB2P98082 770 aa8.01□□□□□ -1.13
COPS3-209ENST00000486810 TP53INP1Q96A56 240 aa8.01□□□□□ -1.13
COPS3-209ENST00000486810 RUSC1Q9BVN2 902 aa8.01□□□□□ -1.13
COPS3-209ENST00000486810 AK5Q9Y6K8 562 aa8.01□□□□□ -1.13
COPS3-209ENST00000486810 GLB1P16278 677 aa8□□□□□ -1.13
COPS3-209ENST00000486810 POU4F3Q15319 338 aa8□□□□□ -1.13
COPS3-209ENST00000486810 ARMC10Q8N2F6 343 aa8□□□□□ -1.13
COPS3-209ENST00000486810 FRMD6Q96NE9 622 aa8□□□□□ -1.13
COPS3-209ENST00000486810 NECAB3Q96P71 396 aaPredicted RBP8□□□□□ -1.13
COPS3-209ENST00000486810 FAM8A1Q9UBU6 413 aa8□□□□□ -1.13
COPS3-209ENST00000486810 ENC1O14682 589 aa7.99□□□□□ -1.13
COPS3-209ENST00000486810 FBXO24O75426 580 aa7.99□□□□□ -1.13
COPS3-209ENST00000486810 TPTE2Q6XPS3 522 aa7.99□□□□□ -1.13
COPS3-209ENST00000486810 PDZD3Q86UT5 571 aa7.99□□□□□ -1.13
COPS3-209ENST00000486810 ANKRD24Q8TF21 1146 aa7.99□□□□□ -1.13
COPS3-209ENST00000486810 FAM46AQ96IP4 442 aaKnown RBP7.99□□□□□ -1.13
COPS3-209ENST00000486810 RNF208Q9H0X6 261 aa7.99□□□□□ -1.13
COPS3-209ENST00000486810 TMEM39AQ9NV64 488 aa7.99□□□□□ -1.13
COPS3-209ENST00000486810 GPN3Q9UHW5 284 aaPredicted RBP7.99□□□□□ -1.13
COPS3-209ENST00000486810 PAGE1O75459 146 aa7.98□□□□□ -1.13
COPS3-209ENST00000486810 CYP11A1P05108 521 aa7.98□□□□□ -1.13
COPS3-209ENST00000486810 CTSHP09668 335 aa7.98□□□□□ -1.13
COPS3-209ENST00000486810 EIF4BP23588 611 aaKnown RBP7.98□□□□□ -1.13
COPS3-209ENST00000486810 PREPP48147 710 aa7.98□□□□□ -1.13
COPS3-209ENST00000486810 TMC4Q7Z404 712 aa7.98□□□□□ -1.13
COPS3-209ENST00000486810 ZFYVE1Q9HBF4 777 aa7.98□□□□□ -1.13
COPS3-209ENST00000486810 DYRK3O43781 588 aa7.97□□□□□ -1.13
COPS3-209ENST00000486810 TIAF1O95411 115 aa7.97□□□□□ -1.13
COPS3-209ENST00000486810 EXOSC6Q5RKV6 272 aaKnown RBP7.97□□□□□ -1.13
COPS3-209ENST00000486810 RASIP1Q5U651 963 aa7.97□□□□□ -1.13
COPS3-209ENST00000486810 SMG8Q8ND04 991 aaKnown RBP7.97□□□□□ -1.13
COPS3-209ENST00000486810 WDR89Q96FK6 387 aaPredicted RBP7.97□□□□□ -1.13
COPS3-209ENST00000486810 SUGCTQ9HAC7 445 aa7.97□□□□□ -1.13
COPS3-209ENST00000486810 PPM1HQ9ULR3 514 aa7.97□□□□□ -1.13
COPS3-209ENST00000486810 ADAM23O75077 832 aa7.96□□□□□ -1.14
COPS3-209ENST00000486810 CELA3AP09093 270 aa7.96□□□□□ -1.14
COPS3-209ENST00000486810 BMP6P22004 513 aa7.96□□□□□ -1.14
COPS3-209ENST00000486810 FGD1P98174 961 aa7.96□□□□□ -1.14
COPS3-209ENST00000486810 AP3B2Q13367 1082 aa7.96□□□□□ -1.14
COPS3-209ENST00000486810 ANKRD34AQ69YU3 496 aa7.96□□□□□ -1.14
COPS3-209ENST00000486810 MPRIPQ6WCQ1 1025 aa7.96□□□□□ -1.14
COPS3-209ENST00000486810 BCL2L13Q9BXK5 485 aa7.96□□□□□ -1.14
COPS3-209ENST00000486810 ZC3H12CQ9C0D7 883 aaKnown RBP7.96□□□□□ -1.14
COPS3-209ENST00000486810 CCDC86Q9H6F5 360 aaKnown RBP7.96□□□□□ -1.14
COPS3-209ENST00000486810 ZNF862O60290 1169 aa7.95□□□□□ -1.14
COPS3-209ENST00000486810 GSTP1P09211 210 aaKnown RBP7.95□□□□□ -1.14
COPS3-209ENST00000486810 H2AFB1P0C5Y9 115 aa7.95□□□□□ -1.14
COPS3-209ENST00000486810 H2AFB2P0C5Z0 115 aa7.95□□□□□ -1.14
COPS3-209ENST00000486810 DRD2P14416 443 aa7.95□□□□□ -1.14
COPS3-209ENST00000486810 PSMD2Q13200 908 aa7.95□□□□□ -1.14
COPS3-209ENST00000486810 MEI1Q5TIA1 1274 aa7.95□□□□□ -1.14
COPS3-209ENST00000486810 SULF2Q8IWU5 870 aa7.95□□□□□ -1.14
COPS3-209ENST00000486810 GIPC2Q8TF65 315 aa7.95□□□□□ -1.14
COPS3-209ENST00000486810 PKNOX2Q96KN3 472 aa7.95□□□□□ -1.14
COPS3-209ENST00000486810 CORO1BQ9BR76 489 aa7.95□□□□□ -1.14
COPS3-209ENST00000486810 CEP41Q9BYV8 373 aa7.95□□□□□ -1.14
COPS3-209ENST00000486810 EIF4EBP3O60516 100 aaPredicted RBP7.94□□□□□ -1.14
COPS3-209ENST00000486810 NME2P22392 152 aa7.94□□□□□ -1.14
COPS3-209ENST00000486810 ARNTP27540 789 aa7.94□□□□□ -1.14
COPS3-209ENST00000486810 PPP2R3AQ06190 1150 aa7.94□□□□□ -1.14
COPS3-209ENST00000486810 ZNF252P-AS1Q0IIN9 211 aa7.94□□□□□ -1.14
COPS3-209ENST00000486810 NUTM2GQ5VZR2 741 aa7.94□□□□□ -1.14
COPS3-209ENST00000486810 PRR23CQ6ZRP0 262 aa7.94□□□□□ -1.14
COPS3-209ENST00000486810 DDX54Q8TDD1 881 aaKnown RBP7.94□□□□□ -1.14
COPS3-209ENST00000486810 WDR18Q9BV38 432 aa7.94□□□□□ -1.14
COPS3-209ENST00000486810 SEMA6BQ9H3T3 888 aa7.94□□□□□ -1.14
COPS3-209ENST00000486810 K7ELQ4 463 aaPredicted RBP7.93□□□□□ -1.14
COPS3-209ENST00000486810 LIG1P18858 919 aa7.93□□□□□ -1.14
COPS3-209ENST00000486810 XPCQ01831 940 aaPredicted RBP7.93□□□□□ -1.14
COPS3-209ENST00000486810 SOX4Q06945 474 aaPredicted RBP7.93□□□□□ -1.14
COPS3-209ENST00000486810 FDX2Q6P4F2 183 aa7.93□□□□□ -1.14
COPS3-209ENST00000486810 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.93□□□□□ -1.14
COPS3-209ENST00000486810 C2CD4AQ8NCU7 369 aaPredicted RBP7.93□□□□□ -1.14
COPS3-209ENST00000486810 GRIN3AQ8TCU5 1115 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms