RNA–Protein interactions for RNA: ENST00000486758.5

SHROOM3-208, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 3,766 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-208ENST00000486758 SPATA31D1Q6ZQQ2 1576 aa14.21□□□□□ -0.14
SHROOM3-208ENST00000486758 PRC1O43663 620 aa14.21□□□□□ -0.14
SHROOM3-208ENST00000486758 LRRN4CLQ8ND94 238 aa14.21□□□□□ -0.14
SHROOM3-208ENST00000486758 LRP2BPQ9P2M1 347 aa14.21□□□□□ -0.14
SHROOM3-208ENST00000486758 FAM160A1Q05DH4 1040 aa14.2□□□□□ -0.14
SHROOM3-208ENST00000486758 KBTBD3Q8NAB2 608 aa14.2□□□□□ -0.14
SHROOM3-208ENST00000486758 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.2□□□□□ -0.14
SHROOM3-208ENST00000486758 JAG2Q9Y219 1238 aa14.2□□□□□ -0.14
SHROOM3-208ENST00000486758 ERICH2A1L162 156 aa14.2□□□□□ -0.14
SHROOM3-208ENST00000486758 DHX16O60231 1041 aaKnown RBP14.2□□□□□ -0.14
SHROOM3-208ENST00000486758 IL15P40933 162 aaPredicted RBP14.2□□□□□ -0.14
SHROOM3-208ENST00000486758 ZAP70P43403 619 aa14.2□□□□□ -0.14
SHROOM3-208ENST00000486758 SPECC1Q5M775 1068 aa14.2□□□□□ -0.14
SHROOM3-208ENST00000486758 CCDC150Q8NCX0 1101 aa14.2□□□□□ -0.14
SHROOM3-208ENST00000486758 PPP1R13BQ96KQ4 1090 aa14.2□□□□□ -0.14
SHROOM3-208ENST00000486758 RABEP2Q9H5N1 569 aa14.2□□□□□ -0.14
SHROOM3-208ENST00000486758 TMEM51Q9NW97 253 aa14.2□□□□□ -0.14
SHROOM3-208ENST00000486758 RSPH14Q9UHP6 348 aa14.2□□□□□ -0.14
SHROOM3-208ENST00000486758 NRKQ7Z2Y5 1582 aa14.2□□□□□ -0.14
SHROOM3-208ENST00000486758 STARD3NLO95772 234 aa14.2□□□□□ -0.14
SHROOM3-208ENST00000486758 MIGA1Q8NAN2 632 aa14.2□□□□□ -0.14
SHROOM3-208ENST00000486758 DESI2Q9BSY9 194 aa14.2□□□□□ -0.14
SHROOM3-208ENST00000486758 USP21Q9UK80 565 aa14.2□□□□□ -0.14
SHROOM3-208ENST00000486758 MORC2Q9Y6X9 1032 aaPredicted RBP14.2□□□□□ -0.14
SHROOM3-208ENST00000486758 CAVIN2O95810 425 aa14.19□□□□□ -0.14
SHROOM3-208ENST00000486758 SCRN1Q12765 414 aa14.19□□□□□ -0.14
SHROOM3-208ENST00000486758 KIF4BQ2VIQ3 1234 aa14.19□□□□□ -0.14
SHROOM3-208ENST00000486758 PLBD2Q8NHP8 589 aa14.19□□□□□ -0.14
SHROOM3-208ENST00000486758 KAZALD1Q96I82 304 aa14.19□□□□□ -0.14
SHROOM3-208ENST00000486758 EYA2O00167 538 aa14.19□□□□□ -0.14
SHROOM3-208ENST00000486758 RHOXF2BP0C7M4 288 aa14.19□□□□□ -0.14
SHROOM3-208ENST00000486758 CAPN2P17655 700 aa14.19□□□□□ -0.14
SHROOM3-208ENST00000486758 POTEAQ6S8J7 498 aa14.19□□□□□ -0.14
SHROOM3-208ENST00000486758 PHKBQ93100 1093 aa14.19□□□□□ -0.14
SHROOM3-208ENST00000486758 RHOXF2Q9BQY4 288 aa14.19□□□□□ -0.14
SHROOM3-208ENST00000486758 ATP1A3P13637 1013 aa14.19□□□□□ -0.14
SHROOM3-208ENST00000486758 ATP5JP18859 108 aa14.19□□□□□ -0.14
SHROOM3-208ENST00000486758 SAFBQ15424 915 aaKnown RBP eCLIP14.19□□□□□ -0.14
SHROOM3-208ENST00000486758 GPATCH11Q8N954 259 aa14.19□□□□□ -0.14
SHROOM3-208ENST00000486758 XAGE2Q96GT9 111 aa14.19□□□□□ -0.14
SHROOM3-208ENST00000486758 NAPBQ9H115 298 aa14.19□□□□□ -0.14
SHROOM3-208ENST00000486758 RAI14Q9P0K7 980 aa14.19□□□□□ -0.14
SHROOM3-208ENST00000486758 RNF113AO15541 343 aaKnown RBP14.18□□□□□ -0.14
SHROOM3-208ENST00000486758 PNMA6AP0CW24 399 aaPredicted RBP14.18□□□□□ -0.14
SHROOM3-208ENST00000486758 GOLPH3LQ9H4A5 285 aa14.18□□□□□ -0.14
SHROOM3-208ENST00000486758 E7EWF7 191 aa14.18□□□□□ -0.14
SHROOM3-208ENST00000486758 CCP110O43303 1012 aa14.18□□□□□ -0.14
SHROOM3-208ENST00000486758 CMTR1Q8N1G2 835 aaKnown RBP14.18□□□□□ -0.14
SHROOM3-208ENST00000486758 MRFAP1L1Q96HT8 127 aa14.18□□□□□ -0.14
SHROOM3-208ENST00000486758 IFIT3O14879 490 aaKnown RBP14.18□□□□□ -0.14
SHROOM3-208ENST00000486758 RAD21O60216 631 aa14.18□□□□□ -0.14
SHROOM3-208ENST00000486758 NDUFA8P51970 172 aa14.18□□□□□ -0.14
SHROOM3-208ENST00000486758 RBM6P78332 1123 aaKnown RBP14.18□□□□□ -0.14
SHROOM3-208ENST00000486758 FANCCQ00597 558 aa14.18□□□□□ -0.14
SHROOM3-208ENST00000486758 AXDND1Q5T1B0 1012 aaPredicted RBP14.18□□□□□ -0.14
SHROOM3-208ENST00000486758 CCDC24Q8N4L8 307 aa14.18□□□□□ -0.14
SHROOM3-208ENST00000486758 TM6SF1Q9BZW5 370 aa14.18□□□□□ -0.14
SHROOM3-208ENST00000486758 B4E1Z4 1266 aa14.17□□□□□ -0.14
SHROOM3-208ENST00000486758 ZSCAN12O43309 604 aa14.17□□□□□ -0.14
SHROOM3-208ENST00000486758 TOB2Q14106 344 aaPredicted RBP14.17□□□□□ -0.14
SHROOM3-208ENST00000486758 JAKMIP3Q5VZ66 844 aa14.17□□□□□ -0.14
SHROOM3-208ENST00000486758 SLC26A6Q9BXS9 759 aa14.17□□□□□ -0.14
SHROOM3-208ENST00000486758 AFF2P51816 1311 aa14.17□□□□□ -0.14
SHROOM3-208ENST00000486758 SPTLC2O15270 562 aa14.17□□□□□ -0.14
SHROOM3-208ENST00000486758 ZSCAN26Q16670 478 aa14.17□□□□□ -0.14
SHROOM3-208ENST00000486758 ASAP1Q9ULH1 1129 aa14.17□□□□□ -0.14
SHROOM3-208ENST00000486758 AKAP2Q9Y2D5 859 aa14.17□□□□□ -0.14
SHROOM3-208ENST00000486758 hCG_1642624A0A1W2PR95 340 aa14.17□□□□□ -0.14
SHROOM3-208ENST00000486758 ANKRD18BA2A2Z9 1011 aa14.17□□□□□ -0.14
SHROOM3-208ENST00000486758 HMGB1P09429 215 aaKnown RBP14.17□□□□□ -0.14
SHROOM3-208ENST00000486758 HSPD1P10809 573 aaKnown RBP14.17□□□□□ -0.14
SHROOM3-208ENST00000486758 SYKP43405 635 aa14.17□□□□□ -0.14
SHROOM3-208ENST00000486758 ADKP55263 362 aaKnown RBP14.17□□□□□ -0.14
SHROOM3-208ENST00000486758 SMC1AQ14683 1233 aaKnown RBP14.17□□□□□ -0.14
SHROOM3-208ENST00000486758 CNNM3Q8NE01 707 aa14.17□□□□□ -0.14
SHROOM3-208ENST00000486758 NOM1Q5C9Z4 860 aaKnown RBP14.16□□□□□ -0.14
SHROOM3-208ENST00000486758 TXLNBQ8N3L3 684 aa14.16□□□□□ -0.14
SHROOM3-208ENST00000486758 GDAP1L1Q96MZ0 367 aa14.16□□□□□ -0.14
SHROOM3-208ENST00000486758 PLEKHA4Q9H4M7 779 aa14.16□□□□□ -0.14
SHROOM3-208ENST00000486758 IL2RBP14784 551 aa14.16□□□□□ -0.14
SHROOM3-208ENST00000486758 METAP2P50579 478 aaKnown RBP eCLIP14.16□□□□□ -0.14
SHROOM3-208ENST00000486758 TMEM67Q5HYA8 995 aa14.16□□□□□ -0.14
SHROOM3-208ENST00000486758 SRRTQ9BXP5 876 aaKnown RBP14.16□□□□□ -0.14
SHROOM3-208ENST00000486758 RASSF4Q9H2L5 321 aa14.16□□□□□ -0.14
SHROOM3-208ENST00000486758 PCDHA7Q9UN72 937 aa14.16□□□□□ -0.14
SHROOM3-208ENST00000486758 CBFA2T2O43439 604 aa14.16□□□□□ -0.14
SHROOM3-208ENST00000486758 ETF1P62495 437 aaKnown RBP14.16□□□□□ -0.14
SHROOM3-208ENST00000486758 ST5P78524 1137 aa14.16□□□□□ -0.14
SHROOM3-208ENST00000486758 NCOA7Q8NI08 942 aa14.16□□□□□ -0.14
SHROOM3-208ENST00000486758 ELP1O95163 1332 aa14.15□□□□□ -0.14
SHROOM3-208ENST00000486758 JCADQ9P266 1359 aa14.15□□□□□ -0.14
SHROOM3-208ENST00000486758 GOLGA8AA7E2F4 631 aa14.15□□□□□ -0.14
SHROOM3-208ENST00000486758 PPARDQ03181 441 aa14.15□□□□□ -0.14
SHROOM3-208ENST00000486758 TRMT44Q8IYL2 757 aaKnown RBP14.15□□□□□ -0.14
SHROOM3-208ENST00000486758 HINFPQ9BQA5 517 aa14.15□□□□□ -0.14
SHROOM3-208ENST00000486758 ALG1Q9BT22 464 aa14.15□□□□□ -0.14
SHROOM3-208ENST00000486758 GPAA1O43292 621 aa14.15□□□□□ -0.14
SHROOM3-208ENST00000486758 ADD1P35611 737 aaKnown RBP14.15□□□□□ -0.14
SHROOM3-208ENST00000486758 STX17P56962 302 aa14.15□□□□□ -0.14
SHROOM3-208ENST00000486758 PPP2R3AQ06190 1150 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms