RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 XRCC5P13010 732 aaKnown RBP9.53□□□□□ -0.88
LTN1-206ENST00000486427 MAOBP27338 520 aa9.53□□□□□ -0.88
LTN1-206ENST00000486427 DUSP9Q99956 384 aaKnown RBP9.53□□□□□ -0.88
LTN1-206ENST00000486427 RNF208Q9H0X6 261 aa9.53□□□□□ -0.88
LTN1-206ENST00000486427 SPG7Q9UQ90 795 aa9.53□□□□□ -0.88
LTN1-206ENST00000486427 K7ELQ4 463 aaPredicted RBP9.52□□□□□ -0.89
LTN1-206ENST00000486427 DYRK3O43781 588 aa9.52□□□□□ -0.89
LTN1-206ENST00000486427 ADAM23O75077 832 aa9.52□□□□□ -0.89
LTN1-206ENST00000486427 ITGB7P26010 798 aa9.52□□□□□ -0.89
LTN1-206ENST00000486427 FBXO33Q7Z6M2 555 aa9.52□□□□□ -0.89
LTN1-206ENST00000486427 TMPRSS13Q9BYE2 586 aa9.52□□□□□ -0.89
LTN1-206ENST00000486427 SEMA6BQ9H3T3 888 aa9.52□□□□□ -0.89
LTN1-206ENST00000486427 C12orf49Q9H741 205 aa9.52□□□□□ -0.89
LTN1-206ENST00000486427 MEGF11A6BM72 1044 aa9.51□□□□□ -0.89
LTN1-206ENST00000486427 TAGLNQ01995 201 aaKnown RBP9.51□□□□□ -0.89
LTN1-206ENST00000486427 POU4F3Q15319 338 aa9.51□□□□□ -0.89
LTN1-206ENST00000486427 ARMC10Q8N2F6 343 aa9.51□□□□□ -0.89
LTN1-206ENST00000486427 SRCIN1Q9C0H9 1055 aa9.51□□□□□ -0.89
LTN1-206ENST00000486427 GIPC1O14908 333 aa9.5□□□□□ -0.89
LTN1-206ENST00000486427 CYP11A1P05108 521 aa9.5□□□□□ -0.89
LTN1-206ENST00000486427 H2AFB1P0C5Y9 115 aa9.5□□□□□ -0.89
LTN1-206ENST00000486427 H2AFB2P0C5Z0 115 aa9.5□□□□□ -0.89
LTN1-206ENST00000486427 GNA15P30679 374 aa9.5□□□□□ -0.89
LTN1-206ENST00000486427 GSTT1P30711 240 aa9.5□□□□□ -0.89
LTN1-206ENST00000486427 PREPP48147 710 aa9.5□□□□□ -0.89
LTN1-206ENST00000486427 FAM46AQ96IP4 442 aaKnown RBP9.5□□□□□ -0.89
LTN1-206ENST00000486427 CEP41Q9BYV8 373 aa9.5□□□□□ -0.89
LTN1-206ENST00000486427 ZFYVE1Q9HBF4 777 aa9.5□□□□□ -0.89
LTN1-206ENST00000486427 GPN3Q9UHW5 284 aaPredicted RBP9.5□□□□□ -0.89
LTN1-206ENST00000486427 EXOSC6Q5RKV6 272 aaKnown RBP9.49□□□□□ -0.89
LTN1-206ENST00000486427 ANKRD34AQ69YU3 496 aa9.49□□□□□ -0.89
LTN1-206ENST00000486427 DDX54Q8TDD1 881 aaKnown RBP9.49□□□□□ -0.89
LTN1-206ENST00000486427 EIF4EBP3O60516 100 aaPredicted RBP9.48□□□□□ -0.89
LTN1-206ENST00000486427 FBXO24O75426 580 aa9.48□□□□□ -0.89
LTN1-206ENST00000486427 USP17L7P0C7H9 530 aa9.48□□□□□ -0.89
LTN1-206ENST00000486427 NUTM2GQ5VZR2 741 aa9.48□□□□□ -0.89
LTN1-206ENST00000486427 SMG8Q8ND04 991 aaKnown RBP9.48□□□□□ -0.89
LTN1-206ENST00000486427 STK35Q8TDR2 534 aa9.48□□□□□ -0.89
LTN1-206ENST00000486427 CORO1BQ9BR76 489 aa9.48□□□□□ -0.89
LTN1-206ENST00000486427 TMEM39AQ9NV64 488 aa9.48□□□□□ -0.89
LTN1-206ENST00000486427 FAM8A1Q9UBU6 413 aa9.48□□□□□ -0.89
LTN1-206ENST00000486427 TIAF1O95411 115 aa9.47□□□□□ -0.89
LTN1-206ENST00000486427 AP3B2Q13367 1082 aa9.47□□□□□ -0.89
LTN1-206ENST00000486427 FDX2Q6P4F2 183 aa9.47□□□□□ -0.89
LTN1-206ENST00000486427 TPTE2Q6XPS3 522 aa9.47□□□□□ -0.89
LTN1-206ENST00000486427 PRR23CQ6ZRP0 262 aa9.47□□□□□ -0.89
LTN1-206ENST00000486427 FRMD6Q96NE9 622 aa9.47□□□□□ -0.89
LTN1-206ENST00000486427 SUGCTQ9HAC7 445 aa9.47□□□□□ -0.89
LTN1-206ENST00000486427 PARP2Q9UGN5 583 aa9.47□□□□□ -0.89
LTN1-206ENST00000486427 DRD2P14416 443 aa9.46□□□□□ -0.9
LTN1-206ENST00000486427 EIF4BP23588 611 aaKnown RBP9.46□□□□□ -0.9
LTN1-206ENST00000486427 XP32Q5T750 250 aa9.46□□□□□ -0.9
LTN1-206ENST00000486427 TMCO4Q5TGY1 634 aa9.46□□□□□ -0.9
LTN1-206ENST00000486427 UTP4Q969X6 686 aaKnown RBP9.46□□□□□ -0.9
LTN1-206ENST00000486427 NECAB3Q96P71 396 aaPredicted RBP9.46□□□□□ -0.9
LTN1-206ENST00000486427 ZC3H12CQ9C0D7 883 aaKnown RBP9.46□□□□□ -0.9
LTN1-206ENST00000486427 AK5Q9Y6K8 562 aa9.46□□□□□ -0.9
LTN1-206ENST00000486427 SART1O43290 800 aaKnown RBP9.45□□□□□ -0.9
LTN1-206ENST00000486427 ERCC3P19447 782 aa9.45□□□□□ -0.9
LTN1-206ENST00000486427 PPP2R3AQ06190 1150 aa9.45□□□□□ -0.9
LTN1-206ENST00000486427 TRIM26Q12899 539 aaPredicted RBP9.45□□□□□ -0.9
LTN1-206ENST00000486427 UVSSAQ2YD98 709 aa9.45□□□□□ -0.9
LTN1-206ENST00000486427 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.45□□□□□ -0.9
LTN1-206ENST00000486427 PDZD3Q86UT5 571 aa9.45□□□□□ -0.9
LTN1-206ENST00000486427 C12orf50Q8NA57 414 aaPredicted RBP9.45□□□□□ -0.9
LTN1-206ENST00000486427 MYRFLQ96LU7 910 aa9.45□□□□□ -0.9
LTN1-206ENST00000486427 FAM161BQ96MY7 647 aa9.45□□□□□ -0.9
LTN1-206ENST00000486427 CCDC86Q9H6F5 360 aaKnown RBP9.45□□□□□ -0.9
LTN1-206ENST00000486427 CYP4F12Q9HCS2 524 aa9.45□□□□□ -0.9
LTN1-206ENST00000486427 PPM1HQ9ULR3 514 aa9.45□□□□□ -0.9
LTN1-206ENST00000486427 ENC1O14682 589 aa9.44□□□□□ -0.9
LTN1-206ENST00000486427 PAGE1O75459 146 aa9.44□□□□□ -0.9
LTN1-206ENST00000486427 FGD1P98174 961 aa9.44□□□□□ -0.9
LTN1-206ENST00000486427 SULF2Q8IWU5 870 aa9.44□□□□□ -0.9
LTN1-206ENST00000486427 GSTP1P09211 210 aaKnown RBP9.43□□□□□ -0.9
LTN1-206ENST00000486427 DAB2P98082 770 aa9.43□□□□□ -0.9
LTN1-206ENST00000486427 SOX4Q06945 474 aaPredicted RBP9.43□□□□□ -0.9
LTN1-206ENST00000486427 PDE3AQ14432 1141 aa9.43□□□□□ -0.9
LTN1-206ENST00000486427 PRSS36Q5K4E3 855 aa9.43□□□□□ -0.9
LTN1-206ENST00000486427 ANKRD24Q8TF21 1146 aa9.43□□□□□ -0.9
LTN1-206ENST00000486427 WDR89Q96FK6 387 aaPredicted RBP9.43□□□□□ -0.9
LTN1-206ENST00000486427 DHX15O43143 795 aaKnown RBP9.42□□□□□ -0.9
LTN1-206ENST00000486427 CELA3AP09093 270 aa9.42□□□□□ -0.9
LTN1-206ENST00000486427 ADH5P11766 374 aa9.42□□□□□ -0.9
LTN1-206ENST00000486427 BMP3P12645 472 aa9.42□□□□□ -0.9
LTN1-206ENST00000486427 LIG1P18858 919 aa9.42□□□□□ -0.9
LTN1-206ENST00000486427 FAM20CQ8IXL6 584 aa9.42□□□□□ -0.9
LTN1-206ENST00000486427 C2CD4AQ8NCU7 369 aaPredicted RBP9.42□□□□□ -0.9
LTN1-206ENST00000486427 WDR18Q9BV38 432 aa9.42□□□□□ -0.9
LTN1-206ENST00000486427 RAXQ9Y2V3 346 aa9.42□□□□□ -0.9
LTN1-206ENST00000486427 GAS2O43903 313 aaKnown RBP9.41□□□□□ -0.9
LTN1-206ENST00000486427 ZNF862O60290 1169 aa9.41□□□□□ -0.9
LTN1-206ENST00000486427 AOC2O75106 756 aa9.41□□□□□ -0.9
LTN1-206ENST00000486427 NME2P22392 152 aa9.41□□□□□ -0.9
LTN1-206ENST00000486427 ARNTP27540 789 aa9.41□□□□□ -0.9
LTN1-206ENST00000486427 PSMD2Q13200 908 aa9.41□□□□□ -0.9
LTN1-206ENST00000486427 SGO2Q562F6 1265 aa9.41□□□□□ -0.9
LTN1-206ENST00000486427 AKAP4Q5JQC9 854 aa9.41□□□□□ -0.9
LTN1-206ENST00000486427 HP1BP3Q5SSJ5 553 aaPredicted RBP9.41□□□□□ -0.9
LTN1-206ENST00000486427 RASIP1Q5U651 963 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms