RNA–Protein interactions for RNA: ENST00000486194.1

HLA-F-228, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 587 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-228ENST00000486194 SRGAP3O43295 1099 aa27.31■■□□□ 1.96
HLA-F-228ENST00000486194 PPP1R12BO60237 982 aaPredicted RBP27.31■■□□□ 1.96
HLA-F-228ENST00000486194 GNAI2P04899 355 aa27.31■■□□□ 1.96
HLA-F-228ENST00000486194 SPDYE2Q495Y8 402 aa27.31■■□□□ 1.96
HLA-F-228ENST00000486194 WDR66Q8TBY9 1149 aa27.31■■□□□ 1.96
HLA-F-228ENST00000486194 CLUAP1Q96AJ1 413 aa27.31■■□□□ 1.96
HLA-F-228ENST00000486194 TEKT1Q969V4 418 aa27.3■■□□□ 1.96
HLA-F-228ENST00000486194 MRIQ9BWK5 157 aa27.3■■□□□ 1.96
HLA-F-228ENST00000486194 ZNF70Q9UC06 446 aaPredicted RBP27.3■■□□□ 1.96
HLA-F-228ENST00000486194 PA2G4Q9UQ80 394 aaKnown RBP27.3■■□□□ 1.96
HLA-F-228ENST00000486194 PRKG1Q13976 671 aa27.29■■□□□ 1.96
HLA-F-228ENST00000486194 CSRNP1Q96S65 589 aa27.29■■□□□ 1.96
HLA-F-228ENST00000486194 TDRD3Q9H7E2 651 aaKnown RBP27.29■■□□□ 1.96
HLA-F-228ENST00000486194 ANGEL1Q9UNK9 670 aaKnown RBP27.29■■□□□ 1.96
HLA-F-228ENST00000486194 UNCXA6NJT0 531 aa27.28■■□□□ 1.96
HLA-F-228ENST00000486194 TNNI2P48788 182 aa27.28■■□□□ 1.96
HLA-F-228ENST00000486194 RASA3Q14644 834 aa27.28■■□□□ 1.96
HLA-F-228ENST00000486194 MAP3K11Q16584 847 aa27.28■■□□□ 1.96
HLA-F-228ENST00000486194 LDLRAD1Q5T700 205 aa27.28■■□□□ 1.96
HLA-F-228ENST00000486194 CAPN15O75808 1086 aa27.27■■□□□ 1.96
HLA-F-228ENST00000486194 AKAP2Q9Y2D5 859 aa27.27■■□□□ 1.96
HLA-F-228ENST00000486194 AOX1Q06278 1338 aa27.26■■□□□ 1.95
HLA-F-228ENST00000486194 SEMA3EO15041 775 aa27.26■■□□□ 1.95
HLA-F-228ENST00000486194 GRIK5Q16478 980 aa27.26■■□□□ 1.95
HLA-F-228ENST00000486194 FTSJ3Q8IY81 847 aaKnown RBP27.26■■□□□ 1.95
HLA-F-228ENST00000486194 RNF186Q9NXI6 227 aa27.26■■□□□ 1.95
HLA-F-228ENST00000486194 TNNQ9UQP3 1299 aa27.26■■□□□ 1.95
HLA-F-228ENST00000486194 TMEM57Q8N5G2 664 aa27.25■■□□□ 1.95
HLA-F-228ENST00000486194 ZDHHC15Q96MV8 337 aa27.25■■□□□ 1.95
HLA-F-228ENST00000486194 TMOD2Q9NZR1 351 aa27.25■■□□□ 1.95
HLA-F-228ENST00000486194 DENND2AQ9ULE3 1009 aa27.25■■□□□ 1.95
HLA-F-228ENST00000486194 ZBTB22O15209 634 aa27.24■■□□□ 1.95
HLA-F-228ENST00000486194 TRPA1O75762 1119 aa27.24■■□□□ 1.95
HLA-F-228ENST00000486194 IREB2P48200 963 aaKnown RBP27.24■■□□□ 1.95
HLA-F-228ENST00000486194 NBPF12Q5TAG4 269 aaPredicted RBP27.24■■□□□ 1.95
HLA-F-228ENST00000486194 HHIPL2Q6UWX4 724 aa27.24■■□□□ 1.95
HLA-F-228ENST00000486194 SLC10A4Q96EP9 437 aa27.23■■□□□ 1.95
HLA-F-228ENST00000486194 TCP10L2B9ZVM9 353 aa27.22■■□□□ 1.95
HLA-F-228ENST00000486194 SREBF2Q12772 1141 aa27.22■■□□□ 1.95
HLA-F-228ENST00000486194 SSC5DA1L4H1 1573 aa27.22■■□□□ 1.95
HLA-F-228ENST00000486194 SALL1Q9NSC2 1324 aa27.2■■□□□ 1.95
HLA-F-228ENST00000486194 PHKA1P46020 1223 aa27.2■■□□□ 1.94
HLA-F-228ENST00000486194 TM4SF4P48230 202 aa27.2■■□□□ 1.94
HLA-F-228ENST00000486194 FKBP1CQ5VVH2 108 aa27.2■■□□□ 1.94
HLA-F-228ENST00000486194 SPRYD7Q5W111 196 aa27.2■■□□□ 1.94
HLA-F-228ENST00000486194 CCDC102BQ68D86 513 aa27.2■■□□□ 1.94
HLA-F-228ENST00000486194 ZGPATQ8N5A5 531 aaKnown RBP27.2■■□□□ 1.94
HLA-F-228ENST00000486194 A0A1B0GUL7 405 aa27.19■■□□□ 1.94
HLA-F-228ENST00000486194 LDHBP07195 334 aaKnown RBP27.19■■□□□ 1.94
HLA-F-228ENST00000486194 TFCP2Q12800 502 aa27.19■■□□□ 1.94
HLA-F-228ENST00000486194 G3BP1Q13283 466 aaKnown RBP eCLIP27.19■■□□□ 1.94
HLA-F-228ENST00000486194 MVPQ14764 893 aaKnown RBP27.19■■□□□ 1.94
HLA-F-228ENST00000486194 ANKRD13AQ8IZ07 590 aa27.19■■□□□ 1.94
HLA-F-228ENST00000486194 FZD1Q9UP38 647 aa27.19■■□□□ 1.94
HLA-F-228ENST00000486194 AKAP11Q9UKA4 1901 aa27.18■■□□□ 1.94
HLA-F-228ENST00000486194 MYH13Q9UKX3 1938 aa27.18■■□□□ 1.94
HLA-F-228ENST00000486194 ZBTB48P10074 688 aaPredicted RBP27.18■■□□□ 1.94
HLA-F-228ENST00000486194 TIMM10P62072 90 aa27.18■■□□□ 1.94
HLA-F-228ENST00000486194 MKRN3Q13064 507 aaKnown RBP27.18■■□□□ 1.94
HLA-F-228ENST00000486194 APOBEC3HQ6NTF7 200 aaKnown RBP27.18■■□□□ 1.94
HLA-F-228ENST00000486194 ITPRIPQ8IWB1 547 aa27.18■■□□□ 1.94
HLA-F-228ENST00000486194 HOOK2Q96ED9 719 aa27.18■■□□□ 1.94
HLA-F-228ENST00000486194 TEPSINQ96N21 525 aa27.18■■□□□ 1.94
HLA-F-228ENST00000486194 PNMA6EA0A0J9YXQ4 647 aa27.17■■□□□ 1.94
HLA-F-228ENST00000486194 USP2O75604 605 aaPredicted RBP27.17■■□□□ 1.94
HLA-F-228ENST00000486194 ADORA1P30542 326 aa27.17■■□□□ 1.94
HLA-F-228ENST00000486194 INHBEP58166 350 aa27.17■■□□□ 1.94
HLA-F-228ENST00000486194 FAM83AQ86UY5 434 aa27.17■■□□□ 1.94
HLA-F-228ENST00000486194 ABHD8Q96I13 439 aa27.17■■□□□ 1.94
HLA-F-228ENST00000486194 TMEM39BQ9GZU3 492 aa27.17■■□□□ 1.94
HLA-F-228ENST00000486194 PDS5AQ29RF7 1337 aaKnown RBP27.16■■□□□ 1.94
HLA-F-228ENST00000486194 MANSC4A6NHS7 340 aaPredicted RBP27.16■■□□□ 1.94
HLA-F-228ENST00000486194 XAGE2Q96GT9 111 aa27.16■■□□□ 1.94
HLA-F-228ENST00000486194 PRDX5P30044 214 aa27.15■■□□□ 1.94
HLA-F-228ENST00000486194 CLMNQ96JQ2 1002 aa27.15■■□□□ 1.94
HLA-F-228ENST00000486194 NEUROD6Q96NK8 337 aa27.15■■□□□ 1.94
HLA-F-228ENST00000486194 MS4A1P11836 297 aa27.14■■□□□ 1.94
HLA-F-228ENST00000486194 CACNB3P54284 484 aa27.14■■□□□ 1.94
HLA-F-228ENST00000486194 GORABQ5T7V8 394 aa27.14■■□□□ 1.94
HLA-F-228ENST00000486194 WNK4Q96J92 1243 aa27.14■■□□□ 1.94
HLA-F-228ENST00000486194 ALDH1A1P00352 501 aa27.13■■□□□ 1.93
HLA-F-228ENST00000486194 ATP8B2P98198 1209 aa27.13■■□□□ 1.93
HLA-F-228ENST00000486194 POLA2Q14181 598 aa27.13■■□□□ 1.93
HLA-F-228ENST00000486194 SPTY2D1Q68D10 685 aaPredicted RBP27.13■■□□□ 1.93
HLA-F-228ENST00000486194 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.13■■□□□ 1.93
HLA-F-228ENST00000486194 DAGLAQ9Y4D2 1042 aa27.13■■□□□ 1.93
HLA-F-228ENST00000486194 ZBTB7BO15156 539 aaPredicted RBP27.12■■□□□ 1.93
HLA-F-228ENST00000486194 DGKZQ13574 1117 aa27.12■■□□□ 1.93
HLA-F-228ENST00000486194 RASGRF1Q13972 1273 aa27.12■■□□□ 1.93
HLA-F-228ENST00000486194 DIXDC1Q155Q3 683 aa27.12■■□□□ 1.93
HLA-F-228ENST00000486194 SLF2Q8IX21 1173 aa27.12■■□□□ 1.93
HLA-F-228ENST00000486194 SSH3Q8TE77 659 aa27.12■■□□□ 1.93
HLA-F-228ENST00000486194 RPAP1Q9BWH6 1393 aaPredicted RBP27.11■■□□□ 1.93
HLA-F-228ENST00000486194 RLBP1P12271 317 aa27.11■■□□□ 1.93
HLA-F-228ENST00000486194 MCOLN1Q9GZU1 580 aa27.11■■□□□ 1.93
HLA-F-228ENST00000486194 CASP8AP2Q9UKL3 1982 aa27.1■■□□□ 1.93
HLA-F-228ENST00000486194 MAP3K9P80192 1104 aa27.1■■□□□ 1.93
HLA-F-228ENST00000486194 OS9Q13438 667 aaPredicted RBP27.1■■□□□ 1.93
HLA-F-228ENST00000486194 NOM1Q5C9Z4 860 aaKnown RBP27.1■■□□□ 1.93
HLA-F-228ENST00000486194 DZIP1Q86YF9 867 aaKnown RBP27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms