RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 MBD4O95243 580 aa17.27■□□□□ 0.36
COL9A1-207ENST00000486080 AIDAQ96BJ3 306 aa17.27■□□□□ 0.36
COL9A1-207ENST00000486080 STRBPQ96SI9 672 aaKnown RBP17.27■□□□□ 0.36
COL9A1-207ENST00000486080 CD2APQ9Y5K6 639 aa17.27■□□□□ 0.36
COL9A1-207ENST00000486080 U3KPZ7 1027 aaPredicted RBP17.27■□□□□ 0.36
COL9A1-207ENST00000486080 NAA16Q6N069 864 aaPredicted RBP17.26■□□□□ 0.35
COL9A1-207ENST00000486080 ARMT1Q9H993 441 aa17.26■□□□□ 0.35
COL9A1-207ENST00000486080 GTF2IP78347 998 aa17.26■□□□□ 0.35
COL9A1-207ENST00000486080 CCDC93Q567U6 631 aa17.26■□□□□ 0.35
COL9A1-207ENST00000486080 SPTY2D1Q68D10 685 aaPredicted RBP17.26■□□□□ 0.35
COL9A1-207ENST00000486080 LCORLQ8N3X6 602 aa17.26■□□□□ 0.35
COL9A1-207ENST00000486080 ZGPATQ8N5A5 531 aaKnown RBP17.26■□□□□ 0.35
COL9A1-207ENST00000486080 DBNDD1Q9H9R9 158 aa17.26■□□□□ 0.35
COL9A1-207ENST00000486080 FAM205AQ6ZU69 1335 aa17.25■□□□□ 0.35
COL9A1-207ENST00000486080 G3V3G9 751 aa17.25■□□□□ 0.35
COL9A1-207ENST00000486080 LDHBP07195 334 aaKnown RBP17.25■□□□□ 0.35
COL9A1-207ENST00000486080 AOC3Q16853 763 aa17.25■□□□□ 0.35
COL9A1-207ENST00000486080 ADCK5Q3MIX3 580 aa17.25■□□□□ 0.35
COL9A1-207ENST00000486080 DCAF8Q5TAQ9 597 aa17.25■□□□□ 0.35
COL9A1-207ENST00000486080 TTLL5Q6EMB2 1281 aa17.25■□□□□ 0.35
COL9A1-207ENST00000486080 KCNQ5Q9NR82 932 aa17.25■□□□□ 0.35
COL9A1-207ENST00000486080 SCN9AQ15858 1988 aa17.25■□□□□ 0.35
COL9A1-207ENST00000486080 DALRD3Q5D0E6 543 aaKnown RBP17.24■□□□□ 0.35
COL9A1-207ENST00000486080 MFSD14BQ5SR56 506 aa17.24■□□□□ 0.35
COL9A1-207ENST00000486080 FBXW7Q969H0 707 aa17.24■□□□□ 0.35
COL9A1-207ENST00000486080 UPF3BQ9BZI7 483 aaKnown RBP17.24■□□□□ 0.35
COL9A1-207ENST00000486080 MYH2Q9UKX2 1941 aa17.24■□□□□ 0.35
COL9A1-207ENST00000486080 PRKAB2O43741 272 aa17.24■□□□□ 0.35
COL9A1-207ENST00000486080 FGAP02671 866 aa17.24■□□□□ 0.35
COL9A1-207ENST00000486080 CYP21A2P08686 494 aa17.24■□□□□ 0.35
COL9A1-207ENST00000486080 ZKSCAN1P17029 563 aaPredicted RBP17.24■□□□□ 0.35
COL9A1-207ENST00000486080 NEK4P51957 841 aa17.24■□□□□ 0.35
COL9A1-207ENST00000486080 DYNLL1P63167 89 aaKnown RBP17.24■□□□□ 0.35
COL9A1-207ENST00000486080 BECN1Q14457 450 aa17.24■□□□□ 0.35
COL9A1-207ENST00000486080 RNF20Q5VTR2 975 aa17.24■□□□□ 0.35
COL9A1-207ENST00000486080 DZIP1Q86YF9 867 aaKnown RBP17.24■□□□□ 0.35
COL9A1-207ENST00000486080 RTKN2Q8IZC4 609 aa17.24■□□□□ 0.35
COL9A1-207ENST00000486080 SNX21Q969T3 373 aa17.24■□□□□ 0.35
COL9A1-207ENST00000486080 SPON1Q9HCB6 807 aa17.24■□□□□ 0.35
COL9A1-207ENST00000486080 MAGEB6P1A0A0J9YX57 407 aa17.23■□□□□ 0.35
COL9A1-207ENST00000486080 CPA1P15085 419 aa17.23■□□□□ 0.35
COL9A1-207ENST00000486080 KIAA2012Q0VF49 1180 aa17.23■□□□□ 0.35
COL9A1-207ENST00000486080 COL9A3Q14050 684 aaPredicted RBP17.23■□□□□ 0.35
COL9A1-207ENST00000486080 SUPT20HQ8NEM7 779 aa17.23■□□□□ 0.35
COL9A1-207ENST00000486080 NLGN2Q8NFZ4 835 aa17.23■□□□□ 0.35
COL9A1-207ENST00000486080 MXD3Q9BW11 206 aa17.23■□□□□ 0.35
COL9A1-207ENST00000486080 ECE2O60344 883 aa17.22■□□□□ 0.35
COL9A1-207ENST00000486080 APPP05067 770 aa17.22■□□□□ 0.35
COL9A1-207ENST00000486080 DIXDC1Q155Q3 683 aa17.22■□□□□ 0.35
COL9A1-207ENST00000486080 GRIPAP1Q4V328 841 aa17.22■□□□□ 0.35
COL9A1-207ENST00000486080 TBC1D22AQ8WUA7 517 aa17.22■□□□□ 0.35
COL9A1-207ENST00000486080 JAKMIP1Q96N16 626 aaKnown RBP17.22■□□□□ 0.35
COL9A1-207ENST00000486080 RIOK1Q9BRS2 568 aaKnown RBP17.22■□□□□ 0.35
COL9A1-207ENST00000486080 ZNF646O15015 1829 aaPredicted RBP17.21■□□□□ 0.35
COL9A1-207ENST00000486080 PPIP5K2O43314 1243 aa17.21■□□□□ 0.35
COL9A1-207ENST00000486080 PODNQ7Z5L7 613 aa17.21■□□□□ 0.35
COL9A1-207ENST00000486080 HSCBQ8IWL3 235 aa17.21■□□□□ 0.35
COL9A1-207ENST00000486080 CERS5Q8N5B7 392 aa17.21■□□□□ 0.35
COL9A1-207ENST00000486080 PSMD1Q99460 953 aa17.21■□□□□ 0.35
COL9A1-207ENST00000486080 EPB41L4AQ9HCS5 686 aaPredicted RBP17.21■□□□□ 0.35
COL9A1-207ENST00000486080 ZNF277Q9NRM2 450 aaPredicted RBP17.21■□□□□ 0.35
COL9A1-207ENST00000486080 DAXXQ9UER7 740 aaPredicted RBP17.21■□□□□ 0.35
COL9A1-207ENST00000486080 SLC4A4Q9Y6R1 1079 aa17.21■□□□□ 0.35
COL9A1-207ENST00000486080 LAMA4Q16363 1823 aa17.21■□□□□ 0.35
COL9A1-207ENST00000486080 GSG1L2A8MUP6 293 aa17.21■□□□□ 0.35
COL9A1-207ENST00000486080 PATL2C9JE40 543 aaKnown RBP17.21■□□□□ 0.35
COL9A1-207ENST00000486080 CASTP20810 708 aaKnown RBP17.21■□□□□ 0.35
COL9A1-207ENST00000486080 TSGA10IPQ3SY00 556 aa17.21■□□□□ 0.35
COL9A1-207ENST00000486080 FER1L6Q2WGJ9 1857 aa17.21■□□□□ 0.35
COL9A1-207ENST00000486080 HAND2P61296 217 aa17.2■□□□□ 0.34
COL9A1-207ENST00000486080 STOX1Q6ZVD7 989 aa17.2■□□□□ 0.34
COL9A1-207ENST00000486080 IFNL3Q8IZI9 196 aa17.2■□□□□ 0.34
COL9A1-207ENST00000486080 AATFQ9NY61 560 aaKnown RBP eCLIP17.2■□□□□ 0.34
COL9A1-207ENST00000486080 CTNNA3Q9UI47 895 aa17.2■□□□□ 0.34
COL9A1-207ENST00000486080 RPAP1Q9BWH6 1393 aaPredicted RBP17.2■□□□□ 0.34
COL9A1-207ENST00000486080 ST18O60284 1047 aa17.19■□□□□ 0.34
COL9A1-207ENST00000486080 SOGA3Q5TF21 947 aa17.19■□□□□ 0.34
COL9A1-207ENST00000486080 TM6SF1Q9BZW5 370 aa17.19■□□□□ 0.34
COL9A1-207ENST00000486080 ZSWIM6Q9HCJ5 1215 aa17.19■□□□□ 0.34
COL9A1-207ENST00000486080 BCS1LQ9Y276 419 aa17.19■□□□□ 0.34
COL9A1-207ENST00000486080 COL4A5P29400 1685 aa17.19■□□□□ 0.34
COL9A1-207ENST00000486080 BAZ2AQ9UIF9 1905 aaKnown RBP17.19■□□□□ 0.34
COL9A1-207ENST00000486080 GNAT2P19087 354 aa17.19■□□□□ 0.34
COL9A1-207ENST00000486080 GSTO1P78417 241 aa17.19■□□□□ 0.34
COL9A1-207ENST00000486080 ALX1Q15699 326 aa17.19■□□□□ 0.34
COL9A1-207ENST00000486080 SDR42E1Q8WUS8 393 aa17.19■□□□□ 0.34
COL9A1-207ENST00000486080 UTRNP46939 3433 aa17.18■□□□□ 0.34
COL9A1-207ENST00000486080 YDJCA8MPS7 323 aa17.18■□□□□ 0.34
COL9A1-207ENST00000486080 F8W031 263 aaPredicted RBP17.18■□□□□ 0.34
COL9A1-207ENST00000486080 IMMTQ16891 758 aaKnown RBP17.18■□□□□ 0.34
COL9A1-207ENST00000486080 TMED8Q6PL24 325 aaPredicted RBP17.18■□□□□ 0.34
COL9A1-207ENST00000486080 TTC14Q96N46 770 aa17.18■□□□□ 0.34
COL9A1-207ENST00000486080 IGSF3O75054 1194 aa17.17■□□□□ 0.34
COL9A1-207ENST00000486080 LARGE2Q8N3Y3 721 aa17.17■□□□□ 0.34
COL9A1-207ENST00000486080 SPRYD3Q8NCJ5 442 aa17.17■□□□□ 0.34
COL9A1-207ENST00000486080 NBPF3Q9H094 633 aa17.17■□□□□ 0.34
COL9A1-207ENST00000486080 CYP46A1Q9Y6A2 500 aa17.17■□□□□ 0.34
COL9A1-207ENST00000486080 MROH7-TTC4A0A0A0MT08 1334 aa17.17■□□□□ 0.34
COL9A1-207ENST00000486080 ADAMTSL1Q8N6G6 1762 aa17.17■□□□□ 0.34
COL9A1-207ENST00000486080 PSME4Q14997 1843 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms