RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 COL1A1P02452 1464 aaPredicted RBP24.25■■□□□ 1.47
SNX5-213ENST00000486039 MYO1BO43795 1136 aa24.24■■□□□ 1.47
SNX5-213ENST00000486039 CRKP46108 304 aa24.24■■□□□ 1.47
SNX5-213ENST00000486039 ATP8B2P98198 1209 aa24.24■■□□□ 1.47
SNX5-213ENST00000486039 POLA2Q14181 598 aa24.24■■□□□ 1.47
SNX5-213ENST00000486039 DEFB129Q9H1M3 183 aa24.24■■□□□ 1.47
SNX5-213ENST00000486039 PHKA1P46020 1223 aa24.23■■□□□ 1.47
SNX5-213ENST00000486039 PAPPA2Q9BXP8 1791 aa24.22■■□□□ 1.47
SNX5-213ENST00000486039 A0A1B0GUL7 405 aa24.22■■□□□ 1.47
SNX5-213ENST00000486039 HDLBPQ00341 1268 aaKnown RBP24.22■■□□□ 1.47
SNX5-213ENST00000486039 SSH3Q8TE77 659 aa24.22■■□□□ 1.47
SNX5-213ENST00000486039 VEZTQ9HBM0 779 aa24.22■■□□□ 1.47
SNX5-213ENST00000486039 SAGE1Q9NXZ1 904 aa24.22■■□□□ 1.47
SNX5-213ENST00000486039 RCAN3Q9UKA8 241 aa24.22■■□□□ 1.47
SNX5-213ENST00000486039 G3BP1Q13283 466 aaKnown RBP eCLIP24.21■■□□□ 1.47
SNX5-213ENST00000486039 SPDYE2Q495Y8 402 aa24.21■■□□□ 1.47
SNX5-213ENST00000486039 CCDC102BQ68D86 513 aa24.21■■□□□ 1.47
SNX5-213ENST00000486039 RASAL3Q86YV0 1011 aa24.21■■□□□ 1.47
SNX5-213ENST00000486039 WDR66Q8TBY9 1149 aa24.21■■□□□ 1.47
SNX5-213ENST00000486039 TDRD3Q9H7E2 651 aaKnown RBP24.21■■□□□ 1.47
SNX5-213ENST00000486039 GNL3LQ9NVN8 582 aaKnown RBP24.21■■□□□ 1.47
SNX5-213ENST00000486039 ZNF70Q9UC06 446 aaPredicted RBP24.21■■□□□ 1.47
SNX5-213ENST00000486039 AKAP2Q9Y2D5 859 aa24.21■■□□□ 1.47
SNX5-213ENST00000486039 SUGT1Q9Y2Z0 365 aa24.21■■□□□ 1.47
SNX5-213ENST00000486039 ECM29Q5VYK3 1845 aa24.2■■□□□ 1.46
SNX5-213ENST00000486039 UBE2Q2LH0YL09 131 aa24.2■■□□□ 1.46
SNX5-213ENST00000486039 NF2P35240 595 aa24.2■■□□□ 1.46
SNX5-213ENST00000486039 XAGE2Q96GT9 111 aa24.2■■□□□ 1.46
SNX5-213ENST00000486039 CSRNP1Q96S65 589 aa24.2■■□□□ 1.46
SNX5-213ENST00000486039 MRIQ9BWK5 157 aa24.2■■□□□ 1.46
SNX5-213ENST00000486039 CASP8AP2Q9UKL3 1982 aa24.2■■□□□ 1.46
SNX5-213ENST00000486039 ZBTB22O15209 634 aa24.19■■□□□ 1.46
SNX5-213ENST00000486039 REM2Q8IYK8 340 aaPredicted RBP24.19■■□□□ 1.46
SNX5-213ENST00000486039 TEKT1Q969V4 418 aa24.19■■□□□ 1.46
SNX5-213ENST00000486039 RNF186Q9NXI6 227 aa24.19■■□□□ 1.46
SNX5-213ENST00000486039 DENND2AQ9ULE3 1009 aa24.19■■□□□ 1.46
SNX5-213ENST00000486039 PPP2R3BQ9Y5P8 575 aa24.19■■□□□ 1.46
SNX5-213ENST00000486039 SEMA3EO15041 775 aa24.18■■□□□ 1.46
SNX5-213ENST00000486039 MS4A1P11836 297 aa24.18■■□□□ 1.46
SNX5-213ENST00000486039 PRKG1Q13976 671 aa24.18■■□□□ 1.46
SNX5-213ENST00000486039 TTLL12Q14166 644 aaPredicted RBP24.18■■□□□ 1.46
SNX5-213ENST00000486039 MCOLN1Q9GZU1 580 aa24.18■■□□□ 1.46
SNX5-213ENST00000486039 MAST3O60307 1309 aa24.17■■□□□ 1.46
SNX5-213ENST00000486039 TRPA1O75762 1119 aa24.17■■□□□ 1.46
SNX5-213ENST00000486039 RASA3Q14644 834 aa24.17■■□□□ 1.46
SNX5-213ENST00000486039 ZDHHC15Q96MV8 337 aa24.17■■□□□ 1.46
SNX5-213ENST00000486039 NEUROD6Q96NK8 337 aa24.17■■□□□ 1.46
SNX5-213ENST00000486039 FZD1Q9UP38 647 aa24.17■■□□□ 1.46
SNX5-213ENST00000486039 CCDC85CA6NKD9 419 aa24.16■■□□□ 1.46
SNX5-213ENST00000486039 PRDX5P30044 214 aa24.16■■□□□ 1.46
SNX5-213ENST00000486039 NBPF12Q5TAG4 269 aaPredicted RBP24.16■■□□□ 1.46
SNX5-213ENST00000486039 APOBEC3HQ6NTF7 200 aaKnown RBP24.16■■□□□ 1.46
SNX5-213ENST00000486039 CEP85Q6P2H3 762 aa24.16■■□□□ 1.46
SNX5-213ENST00000486039 HHIPL2Q6UWX4 724 aa24.16■■□□□ 1.46
SNX5-213ENST00000486039 SSC5DA1L4H1 1573 aa24.16■■□□□ 1.46
SNX5-213ENST00000486039 SALL1Q9NSC2 1324 aa24.15■■□□□ 1.46
SNX5-213ENST00000486039 SURF6O75683 361 aaKnown RBP24.15■■□□□ 1.46
SNX5-213ENST00000486039 DGKZQ13574 1117 aa24.15■■□□□ 1.46
SNX5-213ENST00000486039 RASGRF1Q13972 1273 aa24.15■■□□□ 1.46
SNX5-213ENST00000486039 MVPQ14764 893 aaKnown RBP24.15■■□□□ 1.46
SNX5-213ENST00000486039 COG6Q9Y2V7 657 aa24.15■■□□□ 1.46
SNX5-213ENST00000486039 MYH13Q9UKX3 1938 aa24.15■■□□□ 1.46
SNX5-213ENST00000486039 AKAP11Q9UKA4 1901 aa24.14■■□□□ 1.46
SNX5-213ENST00000486039 TCP10L2B9ZVM9 353 aa24.14■■□□□ 1.45
SNX5-213ENST00000486039 TNFAIP1Q13829 316 aa24.14■■□□□ 1.45
SNX5-213ENST00000486039 ARMC9Q7Z3E5 817 aa24.14■■□□□ 1.45
SNX5-213ENST00000486039 ANGEL1Q9UNK9 670 aaKnown RBP24.14■■□□□ 1.45
SNX5-213ENST00000486039 NOP58Q9Y2X3 529 aaKnown RBP24.14■■□□□ 1.45
SNX5-213ENST00000486039 SUPT20HL1Q3ZLR7 823 aa24.13■■□□□ 1.45
SNX5-213ENST00000486039 LDLRAD1Q5T700 205 aa24.13■■□□□ 1.45
SNX5-213ENST00000486039 TEPSINQ96N21 525 aa24.13■■□□□ 1.45
SNX5-213ENST00000486039 PDS5AQ29RF7 1337 aaKnown RBP24.12■■□□□ 1.45
SNX5-213ENST00000486039 LDHBP07195 334 aaKnown RBP24.12■■□□□ 1.45
SNX5-213ENST00000486039 CACNB3P54284 484 aa24.12■■□□□ 1.45
SNX5-213ENST00000486039 OS9Q13438 667 aaPredicted RBP24.12■■□□□ 1.45
SNX5-213ENST00000486039 DIXDC1Q155Q3 683 aa24.12■■□□□ 1.45
SNX5-213ENST00000486039 MAP3K11Q16584 847 aa24.12■■□□□ 1.45
SNX5-213ENST00000486039 CDAN1Q8IWY9 1227 aa24.12■■□□□ 1.45
SNX5-213ENST00000486039 TMEM39BQ9GZU3 492 aa24.11■■□□□ 1.45
SNX5-213ENST00000486039 GPR108Q9NPR9 543 aa24.11■■□□□ 1.45
SNX5-213ENST00000486039 DDX19BQ9UMR2 479 aa24.11■■□□□ 1.45
SNX5-213ENST00000486039 DAGLAQ9Y4D2 1042 aa24.11■■□□□ 1.45
SNX5-213ENST00000486039 TNNI3KQ59H18 835 aa24.1■■□□□ 1.45
SNX5-213ENST00000486039 GORABQ5T7V8 394 aa24.1■■□□□ 1.45
SNX5-213ENST00000486039 C20orf194Q5TEA3 1177 aa24.1■■□□□ 1.45
SNX5-213ENST00000486039 ZBTB40Q9NUA8 1239 aa24.1■■□□□ 1.45
SNX5-213ENST00000486039 HMG20BQ9P0W2 317 aa24.1■■□□□ 1.45
SNX5-213ENST00000486039 FPGT-TNNI3KV9GXZ4 949 aa24.1■■□□□ 1.45
SNX5-213ENST00000486039 PPP1R12BO60237 982 aaPredicted RBP24.09■■□□□ 1.45
SNX5-213ENST00000486039 ARID4AP29374 1257 aaPredicted RBP24.09■■□□□ 1.45
SNX5-213ENST00000486039 TNNI2P48788 182 aa24.09■■□□□ 1.45
SNX5-213ENST00000486039 ZGPATQ8N5A5 531 aaKnown RBP24.09■■□□□ 1.45
SNX5-213ENST00000486039 USP2O75604 605 aaPredicted RBP24.08■■□□□ 1.45
SNX5-213ENST00000486039 PI16Q6UXB8 463 aa24.08■■□□□ 1.45
SNX5-213ENST00000486039 TMOD2Q9NZR1 351 aa24.08■■□□□ 1.45
SNX5-213ENST00000486039 ABCF2Q9UG63 623 aa24.08■■□□□ 1.45
SNX5-213ENST00000486039 TM4SF4P48230 202 aa24.07■■□□□ 1.44
SNX5-213ENST00000486039 FKBP1CQ5VVH2 108 aa24.07■■□□□ 1.44
SNX5-213ENST00000486039 CDC42EP5Q6NZY7 148 aa24.07■■□□□ 1.44
SNX5-213ENST00000486039 SPATA5Q8NB90 893 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms