RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 FAM155AB1AL88 458 aaPredicted RBP21.88■■□□□ 1.09
COL6A1-204ENST00000486023 HSPA8P11142 646 aaKnown RBP21.88■■□□□ 1.09
COL6A1-204ENST00000486023 MKRN3Q13064 507 aaKnown RBP21.88■■□□□ 1.09
COL6A1-204ENST00000486023 G3BP1Q13283 466 aaKnown RBP eCLIP21.88■■□□□ 1.09
COL6A1-204ENST00000486023 MTX1Q13505 466 aa21.88■■□□□ 1.09
COL6A1-204ENST00000486023 PANK1Q8TE04 598 aa21.88■■□□□ 1.09
COL6A1-204ENST00000486023 ZNF70Q9UC06 446 aaPredicted RBP21.88■■□□□ 1.09
COL6A1-204ENST00000486023 ANGEL1Q9UNK9 670 aaKnown RBP21.88■■□□□ 1.09
COL6A1-204ENST00000486023 TCP10L2B9ZVM9 353 aa21.87■■□□□ 1.09
COL6A1-204ENST00000486023 CAPN15O75808 1086 aa21.87■■□□□ 1.09
COL6A1-204ENST00000486023 PHKA1P46020 1223 aa21.87■■□□□ 1.09
COL6A1-204ENST00000486023 RASA3Q14644 834 aa21.87■■□□□ 1.09
COL6A1-204ENST00000486023 ARMC9Q7Z3E5 817 aa21.87■■□□□ 1.09
COL6A1-204ENST00000486023 TEKT1Q969V4 418 aa21.87■■□□□ 1.09
COL6A1-204ENST00000486023 A0A1B0GUL7 405 aa21.86■■□□□ 1.09
COL6A1-204ENST00000486023 OS9Q13438 667 aaPredicted RBP21.86■■□□□ 1.09
COL6A1-204ENST00000486023 WDR66Q8TBY9 1149 aa21.86■■□□□ 1.09
COL6A1-204ENST00000486023 SLC10A3P09131 477 aa21.85■■□□□ 1.09
COL6A1-204ENST00000486023 CACNB3P54284 484 aa21.85■■□□□ 1.09
COL6A1-204ENST00000486023 GORABQ5T7V8 394 aa21.85■■□□□ 1.09
COL6A1-204ENST00000486023 NBPF12Q5TAG4 269 aaPredicted RBP21.85■■□□□ 1.09
COL6A1-204ENST00000486023 CCDC102BQ68D86 513 aa21.85■■□□□ 1.09
COL6A1-204ENST00000486023 RASAL3Q86YV0 1011 aa21.85■■□□□ 1.09
COL6A1-204ENST00000486023 AKAP2Q9Y2D5 859 aa21.85■■□□□ 1.09
COL6A1-204ENST00000486023 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.85■■□□□ 1.09
COL6A1-204ENST00000486023 ZBTB7BO15156 539 aaPredicted RBP21.84■■□□□ 1.09
COL6A1-204ENST00000486023 SUPT20HL1Q3ZLR7 823 aa21.84■■□□□ 1.09
COL6A1-204ENST00000486023 SPDYE2Q495Y8 402 aa21.84■■□□□ 1.09
COL6A1-204ENST00000486023 XAGE2Q96GT9 111 aa21.84■■□□□ 1.09
COL6A1-204ENST00000486023 PRDM10Q9NQV6 1147 aa21.84■■□□□ 1.09
COL6A1-204ENST00000486023 ATP8B2P98198 1209 aa21.83■■□□□ 1.09
COL6A1-204ENST00000486023 DENND2AQ9ULE3 1009 aa21.83■■□□□ 1.09
COL6A1-204ENST00000486023 PPP1R12BO60237 982 aaPredicted RBP21.82■■□□□ 1.08
COL6A1-204ENST00000486023 SURF6O75683 361 aaKnown RBP21.82■■□□□ 1.08
COL6A1-204ENST00000486023 TNNI2P48788 182 aa21.82■■□□□ 1.08
COL6A1-204ENST00000486023 HDLBPQ00341 1268 aaKnown RBP21.82■■□□□ 1.08
COL6A1-204ENST00000486023 TNFAIP1Q13829 316 aa21.82■■□□□ 1.08
COL6A1-204ENST00000486023 CSRNP1Q96S65 589 aa21.82■■□□□ 1.08
COL6A1-204ENST00000486023 PPP2R3BQ9Y5P8 575 aa21.82■■□□□ 1.08
COL6A1-204ENST00000486023 MAST3O60307 1309 aa21.81■■□□□ 1.08
COL6A1-204ENST00000486023 LDHBP07195 334 aaKnown RBP21.81■■□□□ 1.08
COL6A1-204ENST00000486023 DIXDC1Q155Q3 683 aa21.81■■□□□ 1.08
COL6A1-204ENST00000486023 TMEM39BQ9GZU3 492 aa21.81■■□□□ 1.08
COL6A1-204ENST00000486023 TMOD2Q9NZR1 351 aa21.81■■□□□ 1.08
COL6A1-204ENST00000486023 ABCF2Q9UG63 623 aa21.81■■□□□ 1.08
COL6A1-204ENST00000486023 RCAN3Q9UKA8 241 aa21.81■■□□□ 1.08
COL6A1-204ENST00000486023 SUGT1Q9Y2Z0 365 aa21.81■■□□□ 1.08
COL6A1-204ENST00000486023 TRPA1O75762 1119 aa21.8■■□□□ 1.08
COL6A1-204ENST00000486023 PRDX5P30044 214 aa21.8■■□□□ 1.08
COL6A1-204ENST00000486023 MVPQ14764 893 aaKnown RBP21.8■■□□□ 1.08
COL6A1-204ENST00000486023 CDAN1Q8IWY9 1227 aa21.8■■□□□ 1.08
COL6A1-204ENST00000486023 SLC10A4Q96EP9 437 aa21.8■■□□□ 1.08
COL6A1-204ENST00000486023 COL1A1P02452 1464 aaPredicted RBP21.79■■□□□ 1.08
COL6A1-204ENST00000486023 CA12O43570 354 aa21.79■■□□□ 1.08
COL6A1-204ENST00000486023 MS4A1P11836 297 aa21.79■■□□□ 1.08
COL6A1-204ENST00000486023 APOBEC3HQ6NTF7 200 aaKnown RBP21.79■■□□□ 1.08
COL6A1-204ENST00000486023 ZDHHC15Q96MV8 337 aa21.79■■□□□ 1.08
COL6A1-204ENST00000486023 PAPPA2Q9BXP8 1791 aa21.79■■□□□ 1.08
COL6A1-204ENST00000486023 SEMA3EO15041 775 aa21.78■■□□□ 1.08
COL6A1-204ENST00000486023 RASGRF1Q13972 1273 aa21.78■■□□□ 1.08
COL6A1-204ENST00000486023 POLA2Q14181 598 aa21.78■■□□□ 1.08
COL6A1-204ENST00000486023 SSH3Q8TE77 659 aa21.78■■□□□ 1.08
COL6A1-204ENST00000486023 CLMNQ96JQ2 1002 aa21.78■■□□□ 1.08
COL6A1-204ENST00000486023 BCL11AQ9H165 835 aa21.78■■□□□ 1.08
COL6A1-204ENST00000486023 RNF186Q9NXI6 227 aa21.78■■□□□ 1.08
COL6A1-204ENST00000486023 COG6Q9Y2V7 657 aa21.78■■□□□ 1.08
COL6A1-204ENST00000486023 USP2O75604 605 aaPredicted RBP21.77■■□□□ 1.08
COL6A1-204ENST00000486023 IREB2P48200 963 aaKnown RBP21.77■■□□□ 1.08
COL6A1-204ENST00000486023 LDLRAD1Q5T700 205 aa21.77■■□□□ 1.08
COL6A1-204ENST00000486023 HHIPL2Q6UWX4 724 aa21.77■■□□□ 1.08
COL6A1-204ENST00000486023 MRIQ9BWK5 157 aa21.77■■□□□ 1.08
COL6A1-204ENST00000486023 DZIP1Q86YF9 867 aaKnown RBP21.76■■□□□ 1.07
COL6A1-204ENST00000486023 DAGLAQ9Y4D2 1042 aa21.76■■□□□ 1.07
COL6A1-204ENST00000486023 PI16Q6UXB8 463 aa21.75■■□□□ 1.07
COL6A1-204ENST00000486023 ZGPATQ8N5A5 531 aaKnown RBP21.75■■□□□ 1.07
COL6A1-204ENST00000486023 TEPSINQ96N21 525 aa21.75■■□□□ 1.07
COL6A1-204ENST00000486023 USP40Q9NVE5 1235 aa21.75■■□□□ 1.07
COL6A1-204ENST00000486023 THSD7BQ9C0I4 1608 aa21.75■■□□□ 1.07
COL6A1-204ENST00000486023 TCP10Q12799 353 aa21.74■■□□□ 1.07
COL6A1-204ENST00000486023 CDC42EP5Q6NZY7 148 aa21.74■■□□□ 1.07
COL6A1-204ENST00000486023 CEP85Q6P2H3 762 aa21.74■■□□□ 1.07
COL6A1-204ENST00000486023 TBC1D9Q6ZT07 1266 aa21.74■■□□□ 1.07
COL6A1-204ENST00000486023 YTHDC1Q96MU7 727 aaKnown RBP21.74■■□□□ 1.07
COL6A1-204ENST00000486023 SSC5DA1L4H1 1573 aa21.74■■□□□ 1.07
COL6A1-204ENST00000486023 TNNI3KQ59H18 835 aa21.73■■□□□ 1.07
COL6A1-204ENST00000486023 TTC39AQ5SRH9 613 aa21.73■■□□□ 1.07
COL6A1-204ENST00000486023 SPTY2D1Q68D10 685 aaPredicted RBP21.73■■□□□ 1.07
COL6A1-204ENST00000486023 REM2Q8IYK8 340 aaPredicted RBP21.73■■□□□ 1.07
COL6A1-204ENST00000486023 SPATA5Q8NB90 893 aa21.73■■□□□ 1.07
COL6A1-204ENST00000486023 ELP3Q9H9T3 547 aa21.73■■□□□ 1.07
COL6A1-204ENST00000486023 SNRKQ9NRH2 765 aa21.73■■□□□ 1.07
COL6A1-204ENST00000486023 HMG20BQ9P0W2 317 aa21.73■■□□□ 1.07
COL6A1-204ENST00000486023 FPGT-TNNI3KV9GXZ4 949 aa21.73■■□□□ 1.07
COL6A1-204ENST00000486023 APBB1O00213 710 aa21.72■■□□□ 1.07
COL6A1-204ENST00000486023 MAP3K11Q16584 847 aa21.72■■□□□ 1.07
COL6A1-204ENST00000486023 SPRYD7Q5W111 196 aa21.72■■□□□ 1.07
COL6A1-204ENST00000486023 ERICH6Q7L0X2 663 aa21.72■■□□□ 1.07
COL6A1-204ENST00000486023 ANKRD13AQ8IZ07 590 aa21.72■■□□□ 1.07
COL6A1-204ENST00000486023 DBNDD2Q9BQY9 259 aa21.72■■□□□ 1.07
COL6A1-204ENST00000486023 EXOC6BQ9Y2D4 811 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms