RNA–Protein interactions for RNA: ENST00000485985.1

LMBR1-217, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-217ENST00000485985 FBXO33Q7Z6M2 555 aa26.15■■□□□ 1.78
LMBR1-217ENST00000485985 VEZTQ9HBM0 779 aa26.15■■□□□ 1.78
LMBR1-217ENST00000485985 RBM5P52756 815 aaKnown RBP eCLIP26.14■■□□□ 1.78
LMBR1-217ENST00000485985 PRPF38BQ5VTL8 546 aaKnown RBP26.14■■□□□ 1.78
LMBR1-217ENST00000485985 IGF2BP3O00425 579 aaKnown RBP eCLIP26.13■■□□□ 1.77
LMBR1-217ENST00000485985 RARSP54136 660 aaKnown RBP26.13■■□□□ 1.77
LMBR1-217ENST00000485985 GRIK5Q16478 980 aa26.13■■□□□ 1.77
LMBR1-217ENST00000485985 USP2O75604 605 aaPredicted RBP26.12■■□□□ 1.77
LMBR1-217ENST00000485985 UBTFL1P0CB47 393 aaPredicted RBP26.12■■□□□ 1.77
LMBR1-217ENST00000485985 IREB2P48200 963 aaKnown RBP26.12■■□□□ 1.77
LMBR1-217ENST00000485985 RASA3Q14644 834 aa26.12■■□□□ 1.77
LMBR1-217ENST00000485985 API5Q9BZZ5 524 aaKnown RBP26.12■■□□□ 1.77
LMBR1-217ENST00000485985 TTF2Q9UNY4 1162 aaKnown RBP26.12■■□□□ 1.77
LMBR1-217ENST00000485985 FGFR2P21802 821 aa26.11■■□□□ 1.77
LMBR1-217ENST00000485985 EYA2O00167 538 aa26.1■■□□□ 1.77
LMBR1-217ENST00000485985 BCAMP50895 628 aa26.1■■□□□ 1.77
LMBR1-217ENST00000485985 CHAF1AQ13111 956 aaPredicted RBP26.1■■□□□ 1.77
LMBR1-217ENST00000485985 PUM3Q15397 648 aaKnown RBP26.1■■□□□ 1.77
LMBR1-217ENST00000485985 ATG9AQ7Z3C6 839 aa26.1■■□□□ 1.77
LMBR1-217ENST00000485985 VPS37DQ86XT2 251 aa26.1■■□□□ 1.77
LMBR1-217ENST00000485985 SERPINA10Q9UK55 444 aa26.1■■□□□ 1.77
LMBR1-217ENST00000485985 KIF16BQ96L93 1317 aa26.1■■□□□ 1.77
LMBR1-217ENST00000485985 GJA5P36382 358 aa26.09■■□□□ 1.77
LMBR1-217ENST00000485985 CAVIN4Q5BKX8 364 aa26.09■■□□□ 1.77
LMBR1-217ENST00000485985 ANKRD13AQ8IZ07 590 aa26.09■■□□□ 1.77
LMBR1-217ENST00000485985 PCDH10Q9P2E7 1040 aa26.09■■□□□ 1.77
LMBR1-217ENST00000485985 ZNF70Q9UC06 446 aaPredicted RBP26.09■■□□□ 1.77
LMBR1-217ENST00000485985 TRIM17Q9Y577 477 aa26.09■■□□□ 1.77
LMBR1-217ENST00000485985 LRRFIP2Q9Y608 721 aaKnown RBP26.09■■□□□ 1.77
LMBR1-217ENST00000485985 TNFAIP1Q13829 316 aa26.08■■□□□ 1.77
LMBR1-217ENST00000485985 SPDYE2Q495Y8 402 aa26.08■■□□□ 1.77
LMBR1-217ENST00000485985 OTOP1Q7RTM1 612 aa26.08■■□□□ 1.77
LMBR1-217ENST00000485985 MEIS3Q99687 375 aa26.08■■□□□ 1.77
LMBR1-217ENST00000485985 OTUD7BQ6GQQ9 843 aa26.07■■□□□ 1.76
LMBR1-217ENST00000485985 TDRD3Q9H7E2 651 aaKnown RBP26.07■■□□□ 1.76
LMBR1-217ENST00000485985 CRKP46108 304 aa26.06■■□□□ 1.76
LMBR1-217ENST00000485985 SIL1Q9H173 461 aa26.06■■□□□ 1.76
LMBR1-217ENST00000485985 TESPA1A2RU30 521 aaPredicted RBP26.05■■□□□ 1.76
LMBR1-217ENST00000485985 IFIT1P09914 478 aaKnown RBP26.05■■□□□ 1.76
LMBR1-217ENST00000485985 CRHR2Q13324 411 aa26.05■■□□□ 1.76
LMBR1-217ENST00000485985 DZIP1LQ8IYY4 767 aaKnown RBP26.05■■□□□ 1.76
LMBR1-217ENST00000485985 ERO1AQ96HE7 468 aa26.05■■□□□ 1.76
LMBR1-217ENST00000485985 PTPN18Q99952 460 aa26.05■■□□□ 1.76
LMBR1-217ENST00000485985 FRAT2O75474 233 aaPredicted RBP26.04■■□□□ 1.76
LMBR1-217ENST00000485985 INTS3Q68E01 1043 aaKnown RBP26.04■■□□□ 1.76
LMBR1-217ENST00000485985 CDAN1Q8IWY9 1227 aa26.04■■□□□ 1.76
LMBR1-217ENST00000485985 MIER1Q8N108 512 aa26.04■■□□□ 1.76
LMBR1-217ENST00000485985 TBC1D22AQ8WUA7 517 aa26.04■■□□□ 1.76
LMBR1-217ENST00000485985 ARHGAP45Q92619 1136 aa26.04■■□□□ 1.76
LMBR1-217ENST00000485985 TEPSINQ96N21 525 aa26.04■■□□□ 1.76
LMBR1-217ENST00000485985 ELP3Q9H9T3 547 aa26.04■■□□□ 1.76
LMBR1-217ENST00000485985 TNNQ9UQP3 1299 aa26.04■■□□□ 1.76
LMBR1-217ENST00000485985 CIAO1O76071 339 aa26.03■■□□□ 1.76
LMBR1-217ENST00000485985 SLC5A1P13866 664 aa26.03■■□□□ 1.76
LMBR1-217ENST00000485985 LPIN2Q92539 896 aa26.03■■□□□ 1.76
LMBR1-217ENST00000485985 OPTNQ96CV9 577 aa26.03■■□□□ 1.76
LMBR1-217ENST00000485985 PA2G4Q9UQ80 394 aaKnown RBP26.03■■□□□ 1.76
LMBR1-217ENST00000485985 CD99L2Q8TCZ2 262 aa26.02■■□□□ 1.76
LMBR1-217ENST00000485985 FBXO3Q9UK99 471 aa26.02■■□□□ 1.76
LMBR1-217ENST00000485985 TCP10L2B9ZVM9 353 aa26.01■■□□□ 1.75
LMBR1-217ENST00000485985 TRIM27P14373 513 aa26.01■■□□□ 1.75
LMBR1-217ENST00000485985 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.01■■□□□ 1.75
LMBR1-217ENST00000485985 PTPN22Q9Y2R2 807 aa26.01■■□□□ 1.75
LMBR1-217ENST00000485985 MYH2Q9UKX2 1941 aa26■■□□□ 1.75
LMBR1-217ENST00000485985 BCAR3O75815 825 aa26■■□□□ 1.75
LMBR1-217ENST00000485985 TNNI2P48788 182 aa26■■□□□ 1.75
LMBR1-217ENST00000485985 HDLBPQ00341 1268 aaKnown RBP26■■□□□ 1.75
LMBR1-217ENST00000485985 SP3Q02447 781 aa26■■□□□ 1.75
LMBR1-217ENST00000485985 ATP2B3Q16720 1220 aa26■■□□□ 1.75
LMBR1-217ENST00000485985 MS4A4AQ96JQ5 239 aa26■■□□□ 1.75
LMBR1-217ENST00000485985 TMEM39BQ9GZU3 492 aa26■■□□□ 1.75
LMBR1-217ENST00000485985 TEKT1Q969V4 418 aa25.99■■□□□ 1.75
LMBR1-217ENST00000485985 EFCC1Q9HA90 598 aa25.99■■□□□ 1.75
LMBR1-217ENST00000485985 POTEFA5A3E0 1075 aa25.98■■□□□ 1.75
LMBR1-217ENST00000485985 CACNB3P54284 484 aa25.98■■□□□ 1.75
LMBR1-217ENST00000485985 MAP3K9P80192 1104 aa25.98■■□□□ 1.75
LMBR1-217ENST00000485985 CNKSR2Q8WXI2 1034 aa25.98■■□□□ 1.75
LMBR1-217ENST00000485985 COPRSQ9NQ92 184 aa25.98■■□□□ 1.75
LMBR1-217ENST00000485985 IL15P40933 162 aaPredicted RBP25.97■■□□□ 1.75
LMBR1-217ENST00000485985 VGLL4Q14135 290 aa25.97■■□□□ 1.75
LMBR1-217ENST00000485985 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.97■■□□□ 1.75
LMBR1-217ENST00000485985 ZDHHC15Q96MV8 337 aa25.97■■□□□ 1.75
LMBR1-217ENST00000485985 CEP126Q9P2H0 1117 aa25.97■■□□□ 1.75
LMBR1-217ENST00000485985 HDAC5Q9UQL6 1122 aa25.97■■□□□ 1.75
LMBR1-217ENST00000485985 AK9Q5TCS8 1911 aa25.96■■□□□ 1.75
LMBR1-217ENST00000485985 MAST3O60307 1309 aa25.96■■□□□ 1.75
LMBR1-217ENST00000485985 HNRNPUQ00839 825 aaKnown RBP eCLIP25.96■■□□□ 1.75
LMBR1-217ENST00000485985 CAP1Q01518 475 aa25.96■■□□□ 1.75
LMBR1-217ENST00000485985 DIEXFQ68CQ4 756 aaKnown RBP25.96■■□□□ 1.75
LMBR1-217ENST00000485985 ATF7IPQ6VMQ6 1270 aa25.96■■□□□ 1.75
LMBR1-217ENST00000485985 BRI3BPQ8WY22 251 aa25.96■■□□□ 1.75
LMBR1-217ENST00000485985 FRAT1Q92837 279 aaPredicted RBP25.96■■□□□ 1.75
LMBR1-217ENST00000485985 SUGT1Q9Y2Z0 365 aa25.96■■□□□ 1.75
LMBR1-217ENST00000485985 HTTP42858 3142 aa25.95■■□□□ 1.75
LMBR1-217ENST00000485985 KIAA0100Q14667 2235 aaKnown RBP25.95■■□□□ 1.75
LMBR1-217ENST00000485985 GNAI3P08754 354 aa25.95■■□□□ 1.74
LMBR1-217ENST00000485985 GTF2A2P52657 109 aa25.95■■□□□ 1.74
LMBR1-217ENST00000485985 MTX1Q13505 466 aa25.95■■□□□ 1.74
LMBR1-217ENST00000485985 APOBEC3HQ6NTF7 200 aaKnown RBP25.95■■□□□ 1.74
LMBR1-217ENST00000485985 ARMC5Q96C12 935 aa25.95■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms