RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 ECM29Q5VYK3 1845 aa14.49□□□□□ -0.09
HPS4-214ENST00000485842 POLR2AP24928 1970 aaKnown RBP14.48□□□□□ -0.09
HPS4-214ENST00000485842 ZBTB22O15209 634 aa14.48□□□□□ -0.09
HPS4-214ENST00000485842 ZAP70P43403 619 aa14.48□□□□□ -0.09
HPS4-214ENST00000485842 CRKP46108 304 aa14.48□□□□□ -0.09
HPS4-214ENST00000485842 TBC1D9Q6ZT07 1266 aa14.48□□□□□ -0.09
HPS4-214ENST00000485842 DZIP1Q86YF9 867 aaKnown RBP14.48□□□□□ -0.09
HPS4-214ENST00000485842 TEKT1Q969V4 418 aa14.48□□□□□ -0.09
HPS4-214ENST00000485842 GCC1Q96CN9 775 aa14.48□□□□□ -0.09
HPS4-214ENST00000485842 ZNF512BQ96KM6 892 aaPredicted RBP14.48□□□□□ -0.09
HPS4-214ENST00000485842 SERPINA10Q9UK55 444 aa14.48□□□□□ -0.09
HPS4-214ENST00000485842 NDUFB9Q9Y6M9 179 aa14.48□□□□□ -0.09
HPS4-214ENST00000485842 MAST2Q6P0Q8 1798 aa14.47□□□□□ -0.09
HPS4-214ENST00000485842 MYO5AQ9Y4I1 1855 aaKnown RBP14.47□□□□□ -0.09
HPS4-214ENST00000485842 IGHDP01880 384 aa14.47□□□□□ -0.09
HPS4-214ENST00000485842 DIXDC1Q155Q3 683 aa14.47□□□□□ -0.09
HPS4-214ENST00000485842 ANKRD45Q5TZF3 282 aa14.47□□□□□ -0.09
HPS4-214ENST00000485842 SPTY2D1Q68D10 685 aaPredicted RBP14.47□□□□□ -0.09
HPS4-214ENST00000485842 KRT26Q7Z3Y9 468 aa14.47□□□□□ -0.09
HPS4-214ENST00000485842 ZBED3Q96IU2 234 aaPredicted RBP14.47□□□□□ -0.09
HPS4-214ENST00000485842 RAI14Q9P0K7 980 aa14.47□□□□□ -0.09
HPS4-214ENST00000485842 PGAP2Q9UHJ9 254 aa14.47□□□□□ -0.09
HPS4-214ENST00000485842 SCAF8Q9UPN6 1271 aaKnown RBP14.47□□□□□ -0.09
HPS4-214ENST00000485842 MYH2Q9UKX2 1941 aa14.47□□□□□ -0.09
HPS4-214ENST00000485842 AOX1Q06278 1338 aa14.46□□□□□ -0.09
HPS4-214ENST00000485842 CLRN2A0PK11 232 aa14.46□□□□□ -0.09
HPS4-214ENST00000485842 SPDYE2BA6NHP3 402 aa14.46□□□□□ -0.09
HPS4-214ENST00000485842 ADM5C9JUS6 153 aa14.46□□□□□ -0.09
HPS4-214ENST00000485842 TRAF5O00463 557 aa14.46□□□□□ -0.09
HPS4-214ENST00000485842 MYO1BO43795 1136 aa14.46□□□□□ -0.09
HPS4-214ENST00000485842 ITGBL1O95965 494 aaPredicted RBP14.46□□□□□ -0.09
HPS4-214ENST00000485842 NEFLP07196 543 aa14.46□□□□□ -0.09
HPS4-214ENST00000485842 SPDYE6P0CI01 402 aa14.46□□□□□ -0.09
HPS4-214ENST00000485842 HDLBPQ00341 1268 aaKnown RBP14.46□□□□□ -0.09
HPS4-214ENST00000485842 FMR1Q06787 632 aaKnown RBP eCLIP14.46□□□□□ -0.09
HPS4-214ENST00000485842 ERICH6Q7L0X2 663 aa14.46□□□□□ -0.09
HPS4-214ENST00000485842 USP48Q86UV5 1035 aa14.46□□□□□ -0.09
HPS4-214ENST00000485842 SULF1Q8IWU6 871 aa14.46□□□□□ -0.09
HPS4-214ENST00000485842 MTMR14Q8NCE2 650 aa14.46□□□□□ -0.09
HPS4-214ENST00000485842 PRMT6Q96LA8 375 aaPredicted RBP14.46□□□□□ -0.09
HPS4-214ENST00000485842 VEZTQ9HBM0 779 aa14.46□□□□□ -0.09
HPS4-214ENST00000485842 LRP2BPQ9P2M1 347 aa14.46□□□□□ -0.09
HPS4-214ENST00000485842 CYP2E1P05181 493 aaPredicted RBP14.45□□□□□ -0.1
HPS4-214ENST00000485842 TSHZ3Q63HK5 1081 aa14.45□□□□□ -0.1
HPS4-214ENST00000485842 B4GALNT3Q6L9W6 998 aa14.45□□□□□ -0.1
HPS4-214ENST00000485842 DLK2Q6UY11 383 aa14.45□□□□□ -0.1
HPS4-214ENST00000485842 CDC37L1Q7L3B6 337 aa14.45□□□□□ -0.1
HPS4-214ENST00000485842 GPATCH3Q96I76 525 aa14.45□□□□□ -0.1
HPS4-214ENST00000485842 DNAJC2Q99543 621 aaKnown RBP14.45□□□□□ -0.1
HPS4-214ENST00000485842 TDRD3Q9H7E2 651 aaKnown RBP14.45□□□□□ -0.1
HPS4-214ENST00000485842 DAGLAQ9Y4D2 1042 aa14.45□□□□□ -0.1
HPS4-214ENST00000485842 PASKQ96RG2 1323 aa14.44□□□□□ -0.1
HPS4-214ENST00000485842 PITPNM2Q9BZ72 1349 aa14.44□□□□□ -0.1
HPS4-214ENST00000485842 TRPM7Q96QT4 1865 aa14.44□□□□□ -0.1
HPS4-214ENST00000485842 DOCK2Q92608 1830 aa14.44□□□□□ -0.1
HPS4-214ENST00000485842 MECOMQ03112 1051 aa14.44□□□□□ -0.1
HPS4-214ENST00000485842 HHIPL2Q6UWX4 724 aa14.44□□□□□ -0.1
HPS4-214ENST00000485842 SMC5Q8IY18 1101 aa14.44□□□□□ -0.1
HPS4-214ENST00000485842 OTUD7AQ8TE49 926 aaPredicted RBP14.44□□□□□ -0.1
HPS4-214ENST00000485842 BOLA2Q9H3K6 86 aa14.44□□□□□ -0.1
HPS4-214ENST00000485842 ZNF408Q9H9D4 720 aa14.44□□□□□ -0.1
HPS4-214ENST00000485842 PIH1D3Q9NQM4 214 aaKnown RBP14.44□□□□□ -0.1
HPS4-214ENST00000485842 GOLIM4O00461 696 aa14.43□□□□□ -0.1
HPS4-214ENST00000485842 IDH1O75874 414 aaKnown RBP14.43□□□□□ -0.1
HPS4-214ENST00000485842 HSPA6P17066 643 aa14.43□□□□□ -0.1
HPS4-214ENST00000485842 ATP5JP18859 108 aa14.43□□□□□ -0.1
HPS4-214ENST00000485842 APOBEC3FQ8IUX4 373 aaKnown RBP14.43□□□□□ -0.1
HPS4-214ENST00000485842 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.43□□□□□ -0.1
HPS4-214ENST00000485842 ZDHHC15Q96MV8 337 aa14.43□□□□□ -0.1
HPS4-214ENST00000485842 ANTXR1Q9H6X2 564 aa14.43□□□□□ -0.1
HPS4-214ENST00000485842 ECHDC1Q9NTX5 307 aa14.43□□□□□ -0.1
HPS4-214ENST00000485842 ZNF70Q9UC06 446 aaPredicted RBP14.43□□□□□ -0.1
HPS4-214ENST00000485842 APLP1P51693 650 aa14.42□□□□□ -0.1
HPS4-214ENST00000485842 CACNB3P54284 484 aa14.42□□□□□ -0.1
HPS4-214ENST00000485842 GSTO1P78417 241 aa14.42□□□□□ -0.1
HPS4-214ENST00000485842 SPDYE2Q495Y8 402 aa14.42□□□□□ -0.1
HPS4-214ENST00000485842 APOBEC3HQ6NTF7 200 aaKnown RBP14.42□□□□□ -0.1
HPS4-214ENST00000485842 SLF2Q8IX21 1173 aa14.42□□□□□ -0.1
HPS4-214ENST00000485842 NSUN4Q96CB9 384 aaKnown RBP14.42□□□□□ -0.1
HPS4-214ENST00000485842 EDC3Q96F86 508 aaKnown RBP14.42□□□□□ -0.1
HPS4-214ENST00000485842 MRIQ9BWK5 157 aa14.42□□□□□ -0.1
HPS4-214ENST00000485842 LNPKQ9C0E8 428 aa14.42□□□□□ -0.1
HPS4-214ENST00000485842 TMOD2Q9NZR1 351 aa14.42□□□□□ -0.1
HPS4-214ENST00000485842 MROH7-TTC4A0A0A0MT08 1334 aa14.41□□□□□ -0.1
HPS4-214ENST00000485842 TCP10L2B9ZVM9 353 aa14.41□□□□□ -0.1
HPS4-214ENST00000485842 CELF2O95319 508 aaKnown RBP14.41□□□□□ -0.1
HPS4-214ENST00000485842 LDHCP07864 332 aa14.41□□□□□ -0.1
HPS4-214ENST00000485842 MX1P20591 662 aa14.41□□□□□ -0.1
HPS4-214ENST00000485842 BTDP43251 543 aa14.41□□□□□ -0.1
HPS4-214ENST00000485842 HTRA3P83110 453 aa14.41□□□□□ -0.1
HPS4-214ENST00000485842 PRAMEF18Q5VWM3 479 aa14.41□□□□□ -0.1
HPS4-214ENST00000485842 NAA16Q6N069 864 aaPredicted RBP14.41□□□□□ -0.1
HPS4-214ENST00000485842 ZNF384Q8TF68 577 aa14.41□□□□□ -0.1
HPS4-214ENST00000485842 CDCA5Q96FF9 252 aa14.41□□□□□ -0.1
HPS4-214ENST00000485842 PAG1Q9NWQ8 432 aa14.41□□□□□ -0.1
HPS4-214ENST00000485842 GAKO14976 1311 aa14.41□□□□□ -0.1
HPS4-214ENST00000485842 TNFAIP1Q13829 316 aa14.4□□□□□ -0.1
HPS4-214ENST00000485842 TTF1Q15361 905 aaPredicted RBP14.4□□□□□ -0.1
HPS4-214ENST00000485842 CHD1LQ86WJ1 897 aa14.4□□□□□ -0.1
HPS4-214ENST00000485842 HAUS7Q99871 368 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms