RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 A6NHS1 94 aa5.42□□□□□ -1.54
PRPF38B-205ENST00000485810 WNT11O96014 354 aa5.42□□□□□ -1.54
PRPF38B-205ENST00000485810 SSFA2P28290 1259 aa5.42□□□□□ -1.54
PRPF38B-205ENST00000485810 BEND4Q6ZU67 534 aa5.42□□□□□ -1.54
PRPF38B-205ENST00000485810 TEX2Q8IWB9 1127 aa5.42□□□□□ -1.54
PRPF38B-205ENST00000485810 ANKRD13AQ8IZ07 590 aa5.42□□□□□ -1.54
PRPF38B-205ENST00000485810 GTF3C2Q8WUA4 911 aaPredicted RBP5.42□□□□□ -1.54
PRPF38B-205ENST00000485810 NUDT16Q96DE0 195 aaKnown RBP5.42□□□□□ -1.54
PRPF38B-205ENST00000485810 SEC31BQ9NQW1 1179 aa5.42□□□□□ -1.54
PRPF38B-205ENST00000485810 DNM1Q05193 864 aaKnown RBP5.42□□□□□ -1.54
PRPF38B-205ENST00000485810 COL19A1Q14993 1142 aa5.42□□□□□ -1.54
PRPF38B-205ENST00000485810 TTC39BQ5VTQ0 682 aaPredicted RBP5.42□□□□□ -1.54
PRPF38B-205ENST00000485810 TMED8Q6PL24 325 aaPredicted RBP5.42□□□□□ -1.54
PRPF38B-205ENST00000485810 EDEM1Q92611 657 aa5.42□□□□□ -1.54
PRPF38B-205ENST00000485810 PRDM16Q9HAZ2 1276 aa5.42□□□□□ -1.54
PRPF38B-205ENST00000485810 ANO2Q9NQ90 1003 aa5.42□□□□□ -1.54
PRPF38B-205ENST00000485810 ABI2Q9NYB9 513 aaPredicted RBP5.42□□□□□ -1.54
PRPF38B-205ENST00000485810 TMEM63CQ9P1W3 806 aa5.42□□□□□ -1.54
PRPF38B-205ENST00000485810 TIAM1Q13009 1591 aa5.41□□□□□ -1.54
PRPF38B-205ENST00000485810 AQRO60306 1485 aaKnown RBP eCLIP5.41□□□□□ -1.541e-6■■■■□ 24.7
PRPF38B-205ENST00000485810 FHAD1B1AJZ9 1412 aa5.41□□□□□ -1.54
PRPF38B-205ENST00000485810 CARMIL1Q5VZK9 1371 aa5.41□□□□□ -1.54
PRPF38B-205ENST00000485810 WDR64B1ANS9 1081 aa5.41□□□□□ -1.54
PRPF38B-205ENST00000485810 TRPA1O75762 1119 aa5.41□□□□□ -1.54
PRPF38B-205ENST00000485810 MPSTP25325 297 aa5.41□□□□□ -1.54
PRPF38B-205ENST00000485810 PHLDB3Q6NSJ2 640 aa5.41□□□□□ -1.54
PRPF38B-205ENST00000485810 ABI1Q8IZP0 508 aa5.41□□□□□ -1.54
PRPF38B-205ENST00000485810 ABTB2Q8N961 1025 aa5.41□□□□□ -1.54
PRPF38B-205ENST00000485810 HELQQ8TDG4 1101 aa5.41□□□□□ -1.54
PRPF38B-205ENST00000485810 SPACA7Q96KW9 195 aa5.41□□□□□ -1.54
PRPF38B-205ENST00000485810 HHIPQ96QV1 700 aa5.41□□□□□ -1.54
PRPF38B-205ENST00000485810 GGNBP2Q9H3C7 697 aa5.41□□□□□ -1.54
PRPF38B-205ENST00000485810 SALL4Q9UJQ4 1053 aa5.41□□□□□ -1.54
PRPF38B-205ENST00000485810 H3BRJ5 948 aa5.4□□□□□ -1.55
PRPF38B-205ENST00000485810 PPP1R15AO75807 674 aaPredicted RBP5.4□□□□□ -1.55
PRPF38B-205ENST00000485810 PTPRAP18433 802 aa5.4□□□□□ -1.55
PRPF38B-205ENST00000485810 RETREG2Q8NC44 543 aa5.4□□□□□ -1.55
PRPF38B-205ENST00000485810 MFSD14AQ96MC6 490 aa5.4□□□□□ -1.55
PRPF38B-205ENST00000485810 ELP3Q9H9T3 547 aa5.4□□□□□ -1.55
PRPF38B-205ENST00000485810 FAM13BQ9NYF5 915 aa5.4□□□□□ -1.55
PRPF38B-205ENST00000485810 KANSL3Q9P2N6 904 aa5.4□□□□□ -1.55
PRPF38B-205ENST00000485810 EFCAB5A4FU69 1503 aa5.4□□□□□ -1.55
PRPF38B-205ENST00000485810 ABCA10Q8WWZ4 1543 aa5.4□□□□□ -1.55
PRPF38B-205ENST00000485810 FGD5Q6ZNL6 1462 aa5.39□□□□□ -1.55
PRPF38B-205ENST00000485810 LRRC9Q6ZRR7 1453 aa5.39□□□□□ -1.55
PRPF38B-205ENST00000485810 MEGF11A6BM72 1044 aa5.39□□□□□ -1.55
PRPF38B-205ENST00000485810 DLGAP3O95886 979 aa5.39□□□□□ -1.55
PRPF38B-205ENST00000485810 F13BP05160 661 aa5.39□□□□□ -1.55
PRPF38B-205ENST00000485810 EIF1AXP47813 144 aaKnown RBP5.39□□□□□ -1.55
PRPF38B-205ENST00000485810 NLRP12P59046 1061 aa5.39□□□□□ -1.55
PRPF38B-205ENST00000485810 PIP4K2BP78356 416 aa5.39□□□□□ -1.55
PRPF38B-205ENST00000485810 AAMPQ13685 434 aa5.39□□□□□ -1.55
PRPF38B-205ENST00000485810 MSMPQ1L6U9 139 aa5.39□□□□□ -1.55
PRPF38B-205ENST00000485810 C8orf34Q49A92 452 aa5.39□□□□□ -1.55
PRPF38B-205ENST00000485810 SGO2Q562F6 1265 aa5.39□□□□□ -1.55
PRPF38B-205ENST00000485810 NOM1Q5C9Z4 860 aaKnown RBP5.39□□□□□ -1.55
PRPF38B-205ENST00000485810 ANKRD34AQ69YU3 496 aa5.39□□□□□ -1.55
PRPF38B-205ENST00000485810 FAM117BQ6P1L5 589 aa5.39□□□□□ -1.55
PRPF38B-205ENST00000485810 NOL8Q76FK4 1167 aaKnown RBP5.39□□□□□ -1.55
PRPF38B-205ENST00000485810 ZNF438Q7Z4V0 828 aa5.39□□□□□ -1.55
PRPF38B-205ENST00000485810 KCNF1Q9H3M0 494 aa5.39□□□□□ -1.55
PRPF38B-205ENST00000485810 OSGEPQ9NPF4 335 aa5.39□□□□□ -1.55
PRPF38B-205ENST00000485810 SOX13Q9UN79 622 aa5.39□□□□□ -1.55
PRPF38B-205ENST00000485810 FNDC3AQ9Y2H6 1198 aaKnown RBP5.39□□□□□ -1.55
PRPF38B-205ENST00000485810 CFAP43Q8NDM7 1665 aa5.38□□□□□ -1.55
PRPF38B-205ENST00000485810 ABL1P00519 1130 aa5.38□□□□□ -1.55
PRPF38B-205ENST00000485810 PDGFAP04085 211 aa5.38□□□□□ -1.55
PRPF38B-205ENST00000485810 MAP4P27816 1152 aaKnown RBP5.38□□□□□ -1.55
PRPF38B-205ENST00000485810 ZNF211Q13398 564 aaPredicted RBP5.38□□□□□ -1.55
PRPF38B-205ENST00000485810 CBLL1Q75N03 491 aa5.38□□□□□ -1.55
PRPF38B-205ENST00000485810 NCAPG2Q86XI2 1143 aa5.38□□□□□ -1.55
PRPF38B-205ENST00000485810 EXOC8Q8IYI6 725 aa5.38□□□□□ -1.55
PRPF38B-205ENST00000485810 C1orf127Q8N9H9 656 aa5.38□□□□□ -1.55
PRPF38B-205ENST00000485810 WNT8BQ93098 351 aa5.38□□□□□ -1.55
PRPF38B-205ENST00000485810 RUSC1Q9BVN2 902 aa5.38□□□□□ -1.55
PRPF38B-205ENST00000485810 RNF208Q9H0X6 261 aa5.38□□□□□ -1.55
PRPF38B-205ENST00000485810 DZANK1Q9NVP4 752 aa5.38□□□□□ -1.55
PRPF38B-205ENST00000485810 POLIQ9UNA4 740 aa5.38□□□□□ -1.55
PRPF38B-205ENST00000485810 CC2D2AQ9P2K1 1620 aa5.38□□□□□ -1.55
PRPF38B-205ENST00000485810 DNMBPQ6XZF7 1577 aa5.37□□□□□ -1.55
PRPF38B-205ENST00000485810 MAPKBP1O60336 1514 aa5.37□□□□□ -1.55
PRPF38B-205ENST00000485810 FYCO1Q9BQS8 1478 aa5.37□□□□□ -1.55
PRPF38B-205ENST00000485810 PLEKHD1A6NEE1 506 aa5.37□□□□□ -1.55
PRPF38B-205ENST00000485810 SOX1O00570 391 aaPredicted RBP5.37□□□□□ -1.55
PRPF38B-205ENST00000485810 MAFGO15525 162 aa5.37□□□□□ -1.55
PRPF38B-205ENST00000485810 SART1O43290 800 aaKnown RBP5.37□□□□□ -1.55
PRPF38B-205ENST00000485810 ANAPC15P60006 121 aa5.37□□□□□ -1.55
PRPF38B-205ENST00000485810 HSP90AB4PQ58FF6 505 aa5.37□□□□□ -1.55
PRPF38B-205ENST00000485810 TMPRSS13Q9BYE2 586 aa5.37□□□□□ -1.55
PRPF38B-205ENST00000485810 CHRDQ9H2X0 955 aa5.37□□□□□ -1.55
PRPF38B-205ENST00000485810 PIM2Q9P1W9 311 aa5.37□□□□□ -1.55
PRPF38B-205ENST00000485810 HIF3AQ9Y2N7 669 aa5.37□□□□□ -1.55
PRPF38B-205ENST00000485810 SETD5Q9C0A6 1442 aa5.37□□□□□ -1.55
PRPF38B-205ENST00000485810 CUL7Q14999 1698 aa5.36□□□□□ -1.55
PRPF38B-205ENST00000485810 TIAF1O95411 115 aa5.36□□□□□ -1.55
PRPF38B-205ENST00000485810 JAG1P78504 1218 aa5.36□□□□□ -1.55
PRPF38B-205ENST00000485810 PDE12Q6L8Q7 609 aaKnown RBP5.36□□□□□ -1.55
PRPF38B-205ENST00000485810 XKR5Q6UX68 686 aa5.36□□□□□ -1.55
PRPF38B-205ENST00000485810 CASKIN1Q8WXD9 1431 aa5.36□□□□□ -1.55
PRPF38B-205ENST00000485810 SPATA32Q96LK8 384 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms