RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 MROH5Q6ZUA9 1318 aa16.65■□□□□ 0.26
UBA3-210ENST00000485424 IGF2BP3O00425 579 aaKnown RBP eCLIP16.64■□□□□ 0.25
UBA3-210ENST00000485424 FRAT2O75474 233 aaPredicted RBP16.64■□□□□ 0.25
UBA3-210ENST00000485424 NBPF7P0C2Y1 421 aaPredicted RBP16.64■□□□□ 0.25
UBA3-210ENST00000485424 NBPF12Q5TAG4 269 aaPredicted RBP16.64■□□□□ 0.25
UBA3-210ENST00000485424 IFNL1Q8IU54 200 aa16.64■□□□□ 0.25
UBA3-210ENST00000485424 BICC1Q9H694 974 aaKnown RBP16.64■□□□□ 0.25
UBA3-210ENST00000485424 HIBADHP31937 336 aaKnown RBP16.63■□□□□ 0.25
UBA3-210ENST00000485424 INHBEP58166 350 aa16.63■□□□□ 0.25
UBA3-210ENST00000485424 SUPT20HL1Q3ZLR7 823 aa16.63■□□□□ 0.25
UBA3-210ENST00000485424 MFSD14BQ5SR56 506 aa16.63■□□□□ 0.25
UBA3-210ENST00000485424 CEP290O15078 2479 aa16.63■□□□□ 0.25
UBA3-210ENST00000485424 UNCXA6NJT0 531 aa16.62■□□□□ 0.25
UBA3-210ENST00000485424 GJA5P36382 358 aa16.62■□□□□ 0.25
UBA3-210ENST00000485424 GYG1P46976 350 aa16.62■□□□□ 0.25
UBA3-210ENST00000485424 IREB2P48200 963 aaKnown RBP16.62■□□□□ 0.25
UBA3-210ENST00000485424 RASA3Q14644 834 aa16.62■□□□□ 0.25
UBA3-210ENST00000485424 SPDYE2Q495Y8 402 aa16.62■□□□□ 0.25
UBA3-210ENST00000485424 CAVIN4Q5BKX8 364 aa16.62■□□□□ 0.25
UBA3-210ENST00000485424 METTL24Q5JXM2 366 aa16.62■□□□□ 0.25
UBA3-210ENST00000485424 PRPF38BQ5VTL8 546 aaKnown RBP16.62■□□□□ 0.25
UBA3-210ENST00000485424 TDRD7Q8NHU6 1098 aaKnown RBP16.62■□□□□ 0.25
UBA3-210ENST00000485424 KAZALD1Q96I82 304 aa16.62■□□□□ 0.25
UBA3-210ENST00000485424 PUS3Q9BZE2 481 aaKnown RBP16.62■□□□□ 0.25
UBA3-210ENST00000485424 SMC4Q9NTJ3 1288 aa16.62■□□□□ 0.25
UBA3-210ENST00000485424 UTYO14607 1347 aa16.62■□□□□ 0.25
UBA3-210ENST00000485424 USP2O75604 605 aaPredicted RBP16.61■□□□□ 0.25
UBA3-210ENST00000485424 SLFN5Q08AF3 891 aa16.61■□□□□ 0.25
UBA3-210ENST00000485424 ALDH1L2Q3SY69 923 aa16.61■□□□□ 0.25
UBA3-210ENST00000485424 SSH1Q8WYL5 1049 aa16.61■□□□□ 0.25
UBA3-210ENST00000485424 TTF2Q9UNY4 1162 aaKnown RBP16.61■□□□□ 0.25
UBA3-210ENST00000485424 TNFAIP1Q13829 316 aa16.6■□□□□ 0.25
UBA3-210ENST00000485424 CDAN1Q8IWY9 1227 aa16.6■□□□□ 0.25
UBA3-210ENST00000485424 ANKRD13AQ8IZ07 590 aa16.6■□□□□ 0.25
UBA3-210ENST00000485424 FAM84BQ96KN1 310 aaPredicted RBP16.6■□□□□ 0.25
UBA3-210ENST00000485424 ZNF70Q9UC06 446 aaPredicted RBP16.6■□□□□ 0.25
UBA3-210ENST00000485424 SERPINA10Q9UK55 444 aa16.6■□□□□ 0.25
UBA3-210ENST00000485424 PHIPQ8WWQ0 1821 aa16.6■□□□□ 0.25
UBA3-210ENST00000485424 ATAD5Q96QE3 1844 aa16.6■□□□□ 0.25
UBA3-210ENST00000485424 CRHR2Q13324 411 aa16.59■□□□□ 0.25
UBA3-210ENST00000485424 RABL6Q3YEC7 729 aaPredicted RBP16.59■□□□□ 0.25
UBA3-210ENST00000485424 OTOP1Q7RTM1 612 aa16.59■□□□□ 0.25
UBA3-210ENST00000485424 TEPSINQ96N21 525 aa16.59■□□□□ 0.25
UBA3-210ENST00000485424 TDRD3Q9H7E2 651 aaKnown RBP16.59■□□□□ 0.25
UBA3-210ENST00000485424 RIPOR2Q9Y4F9 1068 aa16.59■□□□□ 0.25
UBA3-210ENST00000485424 TRIM17Q9Y577 477 aa16.59■□□□□ 0.25
UBA3-210ENST00000485424 CHAF1AQ13111 956 aaPredicted RBP16.58■□□□□ 0.24
UBA3-210ENST00000485424 LRRC24Q50LG9 513 aa16.58■□□□□ 0.24
UBA3-210ENST00000485424 DZIP1LQ8IYY4 767 aaKnown RBP16.58■□□□□ 0.24
UBA3-210ENST00000485424 ELP3Q9H9T3 547 aa16.58■□□□□ 0.24
UBA3-210ENST00000485424 DOCK1Q14185 1865 aa16.58■□□□□ 0.24
UBA3-210ENST00000485424 PDE8BO95263 885 aa16.57■□□□□ 0.24
UBA3-210ENST00000485424 IFIT1P09914 478 aaKnown RBP16.57■□□□□ 0.24
UBA3-210ENST00000485424 CRKP46108 304 aa16.57■□□□□ 0.24
UBA3-210ENST00000485424 TNNI2P48788 182 aa16.57■□□□□ 0.24
UBA3-210ENST00000485424 GRIK5Q16478 980 aa16.57■□□□□ 0.24
UBA3-210ENST00000485424 ANKRD44Q8N8A2 993 aa16.57■□□□□ 0.24
UBA3-210ENST00000485424 TBC1D22AQ8WUA7 517 aa16.57■□□□□ 0.24
UBA3-210ENST00000485424 OPTNQ96CV9 577 aa16.57■□□□□ 0.24
UBA3-210ENST00000485424 CDCA7LQ96GN5 454 aa16.57■□□□□ 0.24
UBA3-210ENST00000485424 PTPN18Q99952 460 aa16.57■□□□□ 0.24
UBA3-210ENST00000485424 IQSEC3Q9UPP2 1182 aaPredicted RBP16.57■□□□□ 0.24
UBA3-210ENST00000485424 HDAC5Q9UQL6 1122 aa16.57■□□□□ 0.24
UBA3-210ENST00000485424 CDK5RAP2Q96SN8 1893 aa16.56■□□□□ 0.24
UBA3-210ENST00000485424 TESPA1A2RU30 521 aaPredicted RBP16.56■□□□□ 0.24
UBA3-210ENST00000485424 TCP10L2B9ZVM9 353 aa16.56■□□□□ 0.24
UBA3-210ENST00000485424 OTUD7BQ6GQQ9 843 aa16.56■□□□□ 0.24
UBA3-210ENST00000485424 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.56■□□□□ 0.24
UBA3-210ENST00000485424 VGLL2Q8N8G2 317 aa16.56■□□□□ 0.24
UBA3-210ENST00000485424 CD99L2Q8TCZ2 262 aa16.56■□□□□ 0.24
UBA3-210ENST00000485424 ERO1AQ96HE7 468 aa16.56■□□□□ 0.24
UBA3-210ENST00000485424 TMEM39BQ9GZU3 492 aa16.56■□□□□ 0.24
UBA3-210ENST00000485424 USP44Q9H0E7 712 aa16.56■□□□□ 0.24
UBA3-210ENST00000485424 DOCK3Q8IZD9 2030 aa16.56■□□□□ 0.24
UBA3-210ENST00000485424 CT47B1P0C2W7 299 aaPredicted RBP16.55■□□□□ 0.24
UBA3-210ENST00000485424 UBTFL1P0CB47 393 aaPredicted RBP16.55■□□□□ 0.24
UBA3-210ENST00000485424 CAP1Q01518 475 aa16.55■□□□□ 0.24
UBA3-210ENST00000485424 PUM3Q15397 648 aaKnown RBP16.55■□□□□ 0.24
UBA3-210ENST00000485424 FBXO33Q7Z6M2 555 aa16.55■□□□□ 0.24
UBA3-210ENST00000485424 KLHDC4Q8TBB5 520 aa16.55■□□□□ 0.24
UBA3-210ENST00000485424 MS4A4AQ96JQ5 239 aa16.55■□□□□ 0.24
UBA3-210ENST00000485424 TMOD2Q9NZR1 351 aa16.55■□□□□ 0.24
UBA3-210ENST00000485424 MAST3O60307 1309 aa16.54■□□□□ 0.24
UBA3-210ENST00000485424 SLC5A1P13866 664 aa16.54■□□□□ 0.24
UBA3-210ENST00000485424 VGLL4Q14135 290 aa16.54■□□□□ 0.24
UBA3-210ENST00000485424 PIP4P2Q8N4L2 257 aa16.54■□□□□ 0.24
UBA3-210ENST00000485424 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.54■□□□□ 0.24
UBA3-210ENST00000485424 API5Q9BZZ5 524 aaKnown RBP16.54■□□□□ 0.24
UBA3-210ENST00000485424 PTPN22Q9Y2R2 807 aa16.54■□□□□ 0.24
UBA3-210ENST00000485424 MYO5AQ9Y4I1 1855 aaKnown RBP16.53■□□□□ 0.24
UBA3-210ENST00000485424 POTEFA5A3E0 1075 aa16.53■□□□□ 0.24
UBA3-210ENST00000485424 CCER2I3L3R5 266 aa16.53■□□□□ 0.24
UBA3-210ENST00000485424 BRI3BPQ8WY22 251 aa16.53■□□□□ 0.24
UBA3-210ENST00000485424 TEKT1Q969V4 418 aa16.53■□□□□ 0.24
UBA3-210ENST00000485424 PCDH10Q9P2E7 1040 aa16.53■□□□□ 0.24
UBA3-210ENST00000485424 RPAP1Q9BWH6 1393 aaPredicted RBP16.52■□□□□ 0.24
UBA3-210ENST00000485424 CACNB3P54284 484 aa16.52■□□□□ 0.24
UBA3-210ENST00000485424 HDLBPQ00341 1268 aaKnown RBP16.52■□□□□ 0.24
UBA3-210ENST00000485424 SP3Q02447 781 aa16.52■□□□□ 0.24
UBA3-210ENST00000485424 INTS3Q68E01 1043 aaKnown RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms