RNA–Protein interactions for RNA: ENST00000484979.5

PCDH17-202, Transcript of protocadherin 17, humanhuman

TSL 1 (best)

Gene PCDH17, Length 4,471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17-202ENST00000484979 ANGEL1Q9UNK9 670 aaKnown RBP18.08■□□□□ 0.48
PCDH17-202ENST00000484979 B4E1Z4 1266 aa18.07■□□□□ 0.48
PCDH17-202ENST00000484979 USP48Q86UV5 1035 aa18.07■□□□□ 0.48
PCDH17-202ENST00000484979 KLHDC4Q8TBB5 520 aa18.07■□□□□ 0.48
PCDH17-202ENST00000484979 ZNF594Q96JF6 807 aaPredicted RBP18.07■□□□□ 0.48
PCDH17-202ENST00000484979 NIM1KQ8IY84 436 aa18.07■□□□□ 0.48
PCDH17-202ENST00000484979 C16orf45Q96MC5 204 aaPredicted RBP18.07■□□□□ 0.48
PCDH17-202ENST00000484979 GOPCQ9HD26 462 aa18.07■□□□□ 0.48
PCDH17-202ENST00000484979 JADE2Q9NQC1 790 aa18.07■□□□□ 0.48
PCDH17-202ENST00000484979 USP19O94966 1318 aa18.07■□□□□ 0.48
PCDH17-202ENST00000484979 POTEB2H3BUK9 544 aa18.07■□□□□ 0.48
PCDH17-202ENST00000484979 MCM7P33993 719 aa18.07■□□□□ 0.48
PCDH17-202ENST00000484979 SAP30BPQ9UHR5 308 aaKnown RBP18.07■□□□□ 0.48
PCDH17-202ENST00000484979 PRPHP41219 470 aa18.06■□□□□ 0.48
PCDH17-202ENST00000484979 PPM1FP49593 454 aaPredicted RBP18.06■□□□□ 0.48
PCDH17-202ENST00000484979 GNG11P61952 73 aa18.06■□□□□ 0.48
PCDH17-202ENST00000484979 KIAA0753Q2KHM9 967 aa18.06■□□□□ 0.48
PCDH17-202ENST00000484979 ZKSCAN3Q9BRR0 538 aa18.06■□□□□ 0.48
PCDH17-202ENST00000484979 TRIM35Q9UPQ4 493 aa18.06■□□□□ 0.48
PCDH17-202ENST00000484979 AOX1Q06278 1338 aa18.06■□□□□ 0.48
PCDH17-202ENST00000484979 RPL13P26373 211 aaKnown RBP18.06■□□□□ 0.48
PCDH17-202ENST00000484979 BIN2Q9UBW5 565 aaPredicted RBP18.06■□□□□ 0.48
PCDH17-202ENST00000484979 DEXIO95424 95 aa18.06■□□□□ 0.48
PCDH17-202ENST00000484979 LRSAM1Q6UWE0 723 aa18.06■□□□□ 0.48
PCDH17-202ENST00000484979 SUCLG2Q96I99 432 aa18.06■□□□□ 0.48
PCDH17-202ENST00000484979 ARMT1Q9H993 441 aa18.06■□□□□ 0.48
PCDH17-202ENST00000484979 COMMD10Q9Y6G5 202 aa18.06■□□□□ 0.48
PCDH17-202ENST00000484979 GOLGA6L10A0A0M3HER8 536 aa18.06■□□□□ 0.48
PCDH17-202ENST00000484979 FSD2A1L4K1 749 aa18.06■□□□□ 0.48
PCDH17-202ENST00000484979 TAF5LO75529 589 aa18.06■□□□□ 0.48
PCDH17-202ENST00000484979 RXRAP19793 462 aa18.06■□□□□ 0.48
PCDH17-202ENST00000484979 SNW1Q13573 536 aaKnown RBP18.06■□□□□ 0.48
PCDH17-202ENST00000484979 DLGAP5Q15398 846 aa18.06■□□□□ 0.48
PCDH17-202ENST00000484979 DKC1O60832 514 aaKnown RBP eCLIP18.05■□□□□ 0.48
PCDH17-202ENST00000484979 APBB1IPQ7Z5R6 666 aaPredicted RBP18.05■□□□□ 0.48
PCDH17-202ENST00000484979 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.05■□□□□ 0.48
PCDH17-202ENST00000484979 RTL1A6NKG5 1358 aa18.05■□□□□ 0.48
PCDH17-202ENST00000484979 GIGYF1O75420 1035 aaPredicted RBP18.05■□□□□ 0.48
PCDH17-202ENST00000484979 SLC1A4P43007 532 aa18.05■□□□□ 0.48
PCDH17-202ENST00000484979 LETM2Q2VYF4 491 aa18.05■□□□□ 0.48
PCDH17-202ENST00000484979 FCHSD1Q86WN1 690 aa18.05■□□□□ 0.48
PCDH17-202ENST00000484979 LRRC45Q96CN5 670 aa18.05■□□□□ 0.48
PCDH17-202ENST00000484979 GPCPD1Q9NPB8 672 aa18.05■□□□□ 0.48
PCDH17-202ENST00000484979 IBTKQ9P2D0 1353 aaPredicted RBP18.04■□□□□ 0.48
PCDH17-202ENST00000484979 PHKG2P15735 406 aa18.04■□□□□ 0.48
PCDH17-202ENST00000484979 PPP1R2P41236 205 aa18.04■□□□□ 0.48
PCDH17-202ENST00000484979 SP4Q02446 784 aa18.04■□□□□ 0.48
PCDH17-202ENST00000484979 PTPRTO14522 1441 aa18.04■□□□□ 0.48
PCDH17-202ENST00000484979 MAP2K1Q02750 393 aaPredicted RBP18.04■□□□□ 0.48
PCDH17-202ENST00000484979 H7C1D1 291 aa18.04■□□□□ 0.48
PCDH17-202ENST00000484979 ANO6Q4KMQ2 910 aa18.04■□□□□ 0.48
PCDH17-202ENST00000484979 CCDC65Q8IXS2 484 aa18.04■□□□□ 0.48
PCDH17-202ENST00000484979 DDX12PQ92771 950 aa18.04■□□□□ 0.48
PCDH17-202ENST00000484979 USP26Q9BXU7 913 aa18.04■□□□□ 0.48
PCDH17-202ENST00000484979 TMEM94Q12767 1356 aa18.04■□□□□ 0.48
PCDH17-202ENST00000484979 PLCD1P51178 756 aa18.04■□□□□ 0.48
PCDH17-202ENST00000484979 SMC1AQ14683 1233 aaKnown RBP18.04■□□□□ 0.48
PCDH17-202ENST00000484979 ZNF408Q9H9D4 720 aa18.04■□□□□ 0.48
PCDH17-202ENST00000484979 TRPC5Q9UL62 973 aaPredicted RBP18.04■□□□□ 0.48
PCDH17-202ENST00000484979 CEP170Q5SW79 1584 aa18.03■□□□□ 0.48
PCDH17-202ENST00000484979 KIAA0232Q92628 1395 aa18.03■□□□□ 0.48
PCDH17-202ENST00000484979 PRDM1O75626 825 aa18.03■□□□□ 0.48
PCDH17-202ENST00000484979 CEP83Q9Y592 693 aa18.03■□□□□ 0.48
PCDH17-202ENST00000484979 MRVI1Q9Y6F6 885 aa18.03■□□□□ 0.48
PCDH17-202ENST00000484979 MAST1Q9Y2H9 1570 aa18.03■□□□□ 0.48
PCDH17-202ENST00000484979 CA8P35219 290 aa18.03■□□□□ 0.48
PCDH17-202ENST00000484979 FMNL3Q8IVF7 1028 aa18.03■□□□□ 0.48
PCDH17-202ENST00000484979 CCDC24Q8N4L8 307 aa18.03■□□□□ 0.48
PCDH17-202ENST00000484979 MSANTD4Q8NCY6 345 aa18.03■□□□□ 0.48
PCDH17-202ENST00000484979 PPIP5K2O43314 1243 aa18.03■□□□□ 0.48
PCDH17-202ENST00000484979 TNFAIP1Q13829 316 aa18.03■□□□□ 0.48
PCDH17-202ENST00000484979 ZSCAN23Q3MJ62 389 aa18.03■□□□□ 0.48
PCDH17-202ENST00000484979 NLGN1Q8N2Q7 840 aa18.03■□□□□ 0.48
PCDH17-202ENST00000484979 AATFQ9NY61 560 aaKnown RBP eCLIP18.02■□□□□ 0.48
PCDH17-202ENST00000484979 ZBTB21Q9ULJ3 1066 aa18.02■□□□□ 0.48
PCDH17-202ENST00000484979 HSP90AA4PQ58FG1 418 aa18.02■□□□□ 0.48
PCDH17-202ENST00000484979 SPATA5Q8NB90 893 aa18.02■□□□□ 0.48
PCDH17-202ENST00000484979 TTC12Q9H892 705 aaPredicted RBP18.02■□□□□ 0.48
PCDH17-202ENST00000484979 DNMT1P26358 1616 aaKnown RBP18.02■□□□□ 0.47
PCDH17-202ENST00000484979 HAUS3Q68CZ6 603 aa18.02■□□□□ 0.47
PCDH17-202ENST00000484979 LLPHQ9BRT6 129 aaKnown RBP18.02■□□□□ 0.47
PCDH17-202ENST00000484979 NOD1Q9Y239 953 aa18.02■□□□□ 0.47
PCDH17-202ENST00000484979 SGSM2O43147 1006 aa18.01■□□□□ 0.47
PCDH17-202ENST00000484979 AOPEPQ8N6M6 819 aa18.01■□□□□ 0.47
PCDH17-202ENST00000484979 GPHNQ9NQX3 736 aaPredicted RBP18.01■□□□□ 0.47
PCDH17-202ENST00000484979 V9GY48 417 aaPredicted RBP18.01■□□□□ 0.47
PCDH17-202ENST00000484979 INSRP06213 1382 aa18.01■□□□□ 0.47
PCDH17-202ENST00000484979 RPS6KB1P23443 525 aa18.01■□□□□ 0.47
PCDH17-202ENST00000484979 FAM212AQ96EL1 285 aa18.01■□□□□ 0.47
PCDH17-202ENST00000484979 CCDC42Q96M95 316 aa18.01■□□□□ 0.47
PCDH17-202ENST00000484979 NEURL1BA8MQ27 555 aa18.01■□□□□ 0.47
PCDH17-202ENST00000484979 SYT1P21579 422 aa18.01■□□□□ 0.47
PCDH17-202ENST00000484979 SV2BQ7L1I2 683 aa18.01■□□□□ 0.47
PCDH17-202ENST00000484979 LMBR1Q8WVP7 490 aa18.01■□□□□ 0.47
PCDH17-202ENST00000484979 BBXQ8WY36 941 aaPredicted RBP18.01■□□□□ 0.47
PCDH17-202ENST00000484979 DNAJC25Q9H1X3 360 aa18.01■□□□□ 0.47
PCDH17-202ENST00000484979 PABPN1LA6NDY0 278 aaKnown RBP18■□□□□ 0.47
PCDH17-202ENST00000484979 TACC1O75410 805 aa18■□□□□ 0.47
PCDH17-202ENST00000484979 LZTS2Q9BRK4 669 aa18■□□□□ 0.47
PCDH17-202ENST00000484979 SELENOOQ9BVL4 669 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms