RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 WDR33Q9C0J8 1336 aaKnown RBP19.79■□□□□ 0.76
CTSA-207ENST00000484855 BBOX1O75936 387 aa19.78■□□□□ 0.76
CTSA-207ENST00000484855 STK3Q13188 491 aa19.78■□□□□ 0.76
CTSA-207ENST00000484855 MIGA1Q8NAN2 632 aa19.78■□□□□ 0.76
CTSA-207ENST00000484855 CRAMP1Q96RY5 1269 aa19.78■□□□□ 0.76
CTSA-207ENST00000484855 EPB41L4AQ9HCS5 686 aaPredicted RBP19.78■□□□□ 0.76
CTSA-207ENST00000484855 COL11A2P13942 1736 aaPredicted RBP19.78■□□□□ 0.76
CTSA-207ENST00000484855 QSER1Q2KHR3 1735 aa19.78■□□□□ 0.76
CTSA-207ENST00000484855 TIAM2Q8IVF5 1701 aa19.78■□□□□ 0.76
CTSA-207ENST00000484855 KIAA1551Q9HCM1 1747 aa19.78■□□□□ 0.76
CTSA-207ENST00000484855 GPSM2P81274 684 aa19.78■□□□□ 0.76
CTSA-207ENST00000484855 CHAF1AQ13111 956 aaPredicted RBP19.78■□□□□ 0.76
CTSA-207ENST00000484855 RALYLQ86SE5 291 aaKnown RBP19.78■□□□□ 0.76
CTSA-207ENST00000484855 IFNL3Q8IZI9 196 aa19.78■□□□□ 0.76
CTSA-207ENST00000484855 NCOA7Q8NI08 942 aa19.78■□□□□ 0.76
CTSA-207ENST00000484855 FBXO41Q8TF61 875 aa19.78■□□□□ 0.76
CTSA-207ENST00000484855 AGXT2Q9BYV1 514 aa19.78■□□□□ 0.76
CTSA-207ENST00000484855 NAPBQ9H115 298 aa19.78■□□□□ 0.76
CTSA-207ENST00000484855 ZBTB22O15209 634 aa19.77■□□□□ 0.76
CTSA-207ENST00000484855 ADGRA1Q86SQ6 560 aa19.77■□□□□ 0.76
CTSA-207ENST00000484855 BRIP1Q9BX63 1249 aa19.77■□□□□ 0.76
CTSA-207ENST00000484855 LTBP1Q14766 1721 aa19.77■□□□□ 0.76
CTSA-207ENST00000484855 TRAK2O60296 914 aa19.77■□□□□ 0.75
CTSA-207ENST00000484855 MMP10P09238 476 aa19.77■□□□□ 0.75
CTSA-207ENST00000484855 MCTP1Q6DN14 999 aa19.77■□□□□ 0.75
CTSA-207ENST00000484855 NAA16Q6N069 864 aaPredicted RBP19.77■□□□□ 0.75
CTSA-207ENST00000484855 CHST3Q7LGC8 479 aa19.77■□□□□ 0.75
CTSA-207ENST00000484855 MB21D2Q8IYB1 491 aaPredicted RBP19.77■□□□□ 0.75
CTSA-207ENST00000484855 GTF3C6Q969F1 213 aa19.77■□□□□ 0.75
CTSA-207ENST00000484855 NBPF3Q9H094 633 aa19.77■□□□□ 0.75
CTSA-207ENST00000484855 NSFL1CQ9UNZ2 370 aaKnown RBP19.77■□□□□ 0.75
CTSA-207ENST00000484855 PARP3Q9Y6F1 533 aa19.77■□□□□ 0.75
CTSA-207ENST00000484855 SLC4A4Q9Y6R1 1079 aa19.77■□□□□ 0.75
CTSA-207ENST00000484855 MAGEB6P1A0A0J9YX57 407 aa19.76■□□□□ 0.75
CTSA-207ENST00000484855 NACAP1Q9BZK3 213 aa19.76■□□□□ 0.75
CTSA-207ENST00000484855 GSG1L2A8MUP6 293 aa19.76■□□□□ 0.75
CTSA-207ENST00000484855 STX6O43752 255 aa19.76■□□□□ 0.75
CTSA-207ENST00000484855 UFL1O94874 794 aa19.76■□□□□ 0.75
CTSA-207ENST00000484855 SYT1P21579 422 aa19.76■□□□□ 0.75
CTSA-207ENST00000484855 ATP2B4P23634 1241 aa19.76■□□□□ 0.75
CTSA-207ENST00000484855 MCM5P33992 734 aa19.76■□□□□ 0.75
CTSA-207ENST00000484855 TRDNQ13061 729 aa19.76■□□□□ 0.75
CTSA-207ENST00000484855 EZH2Q15910 746 aaKnown RBP19.76■□□□□ 0.75
CTSA-207ENST00000484855 C15orf52Q6ZUT6 534 aaKnown RBP19.76■□□□□ 0.75
CTSA-207ENST00000484855 ZNF804AQ7Z570 1209 aa19.76■□□□□ 0.75
CTSA-207ENST00000484855 TBC1D10CQ8IV04 446 aa19.76■□□□□ 0.75
CTSA-207ENST00000484855 GGA1Q9UJY5 639 aa19.76■□□□□ 0.75
CTSA-207ENST00000484855 PRKAB2O43741 272 aa19.75■□□□□ 0.75
CTSA-207ENST00000484855 APOBRQ0VD83 1088 aa19.75■□□□□ 0.75
CTSA-207ENST00000484855 MSL1Q68DK7 614 aa19.75■□□□□ 0.75
CTSA-207ENST00000484855 PRC1O43663 620 aa19.74■□□□□ 0.75
CTSA-207ENST00000484855 TDO2P48775 406 aa19.74■□□□□ 0.75
CTSA-207ENST00000484855 EN1Q05925 392 aaPredicted RBP19.74■□□□□ 0.75
CTSA-207ENST00000484855 GSE1Q14687 1217 aa19.74■□□□□ 0.75
CTSA-207ENST00000484855 TMC4Q7Z404 712 aa19.74■□□□□ 0.75
CTSA-207ENST00000484855 FBXL16Q8N461 479 aa19.74■□□□□ 0.75
CTSA-207ENST00000484855 GPR101Q96P66 508 aaPredicted RBP19.74■□□□□ 0.75
CTSA-207ENST00000484855 BAZ2AQ9UIF9 1905 aaKnown RBP19.74■□□□□ 0.75
CTSA-207ENST00000484855 TCHHQ07283 1943 aa19.74■□□□□ 0.75
CTSA-207ENST00000484855 PPEF1O14829 653 aaPredicted RBP19.74■□□□□ 0.75
CTSA-207ENST00000484855 DTNBO60941 627 aa19.74■□□□□ 0.75
CTSA-207ENST00000484855 NSUN4Q96CB9 384 aaKnown RBP19.74■□□□□ 0.75
CTSA-207ENST00000484855 CAMKK2Q96RR4 588 aa19.74■□□□□ 0.75
CTSA-207ENST00000484855 ANO8Q9HCE9 1232 aaPredicted RBP19.74■□□□□ 0.75
CTSA-207ENST00000484855 WDR19Q8NEZ3 1342 aa19.74■□□□□ 0.75
CTSA-207ENST00000484855 PFKFB2O60825 505 aa19.73■□□□□ 0.75
CTSA-207ENST00000484855 ZNF384Q8TF68 577 aa19.73■□□□□ 0.75
CTSA-207ENST00000484855 PODXL2Q9NZ53 605 aa19.73■□□□□ 0.75
CTSA-207ENST00000484855 JAG2Q9Y219 1238 aa19.73■□□□□ 0.75
CTSA-207ENST00000484855 DUOX1Q9NRD9 1551 aa19.73■□□□□ 0.75
CTSA-207ENST00000484855 ZSCAN22P10073 491 aaPredicted RBP19.73■□□□□ 0.75
CTSA-207ENST00000484855 DEKP35659 375 aaKnown RBP19.73■□□□□ 0.75
CTSA-207ENST00000484855 PDE6BP35913 854 aa19.73■□□□□ 0.75
CTSA-207ENST00000484855 MECOMQ03112 1051 aa19.73■□□□□ 0.75
CTSA-207ENST00000484855 RIOK1Q9BRS2 568 aaKnown RBP19.73■□□□□ 0.75
CTSA-207ENST00000484855 SRGNP10124 158 aa19.72■□□□□ 0.75
CTSA-207ENST00000484855 NPR1P16066 1061 aa19.72■□□□□ 0.75
CTSA-207ENST00000484855 PRDX5P30044 214 aa19.72■□□□□ 0.75
CTSA-207ENST00000484855 ANTXR2P58335 489 aa19.72■□□□□ 0.75
CTSA-207ENST00000484855 SCRN1Q12765 414 aa19.72■□□□□ 0.75
CTSA-207ENST00000484855 SLC15A2Q16348 729 aa19.72■□□□□ 0.75
CTSA-207ENST00000484855 SKOR2Q2VWA4 1001 aaPredicted RBP19.72■□□□□ 0.75
CTSA-207ENST00000484855 SPTY2D1Q68D10 685 aaPredicted RBP19.72■□□□□ 0.75
CTSA-207ENST00000484855 TDRD7Q8NHU6 1098 aaKnown RBP19.72■□□□□ 0.75
CTSA-207ENST00000484855 STK32BQ9NY57 414 aa19.72■□□□□ 0.75
CTSA-207ENST00000484855 SALL1Q9NSC2 1324 aa19.71■□□□□ 0.75
CTSA-207ENST00000484855 WDR66Q8TBY9 1149 aa19.71■□□□□ 0.75
CTSA-207ENST00000484855 NAP1L2Q9ULW6 460 aaPredicted RBP19.71■□□□□ 0.75
CTSA-207ENST00000484855 NEDD4P46934 1319 aa19.71■□□□□ 0.75
CTSA-207ENST00000484855 CTDSPL2Q05D32 466 aa19.71■□□□□ 0.75
CTSA-207ENST00000484855 TMED8Q6PL24 325 aaPredicted RBP19.71■□□□□ 0.75
CTSA-207ENST00000484855 SP8Q8IXZ3 490 aa19.71■□□□□ 0.75
CTSA-207ENST00000484855 SDR42E1Q8WUS8 393 aa19.71■□□□□ 0.75
CTSA-207ENST00000484855 ZNF274Q96GC6 653 aaPredicted RBP19.71■□□□□ 0.75
CTSA-207ENST00000484855 LAMB1P07942 1786 aa19.71■□□□□ 0.75
CTSA-207ENST00000484855 PDCP20941 246 aa19.7■□□□□ 0.74
CTSA-207ENST00000484855 DYNLL1P63167 89 aaKnown RBP19.7■□□□□ 0.74
CTSA-207ENST00000484855 DZIP1Q86YF9 867 aaKnown RBP19.7■□□□□ 0.74
CTSA-207ENST00000484855 TBC1D16Q8TBP0 767 aa19.7■□□□□ 0.74
CTSA-207ENST00000484855 CHAMP1Q96JM3 812 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms