RNA–Protein interactions for RNA: ENST00000484822.1

RXRA-203, Transcript of retinoid X receptor alpha, humanhuman

TSL 2

Gene RXRA, Length 5,215 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-203ENST00000484822 A0A1B0GUA9 196 aa17.12■□□□□ 0.33
RXRA-203ENST00000484822 PSMA7O14818 248 aa17.12■□□□□ 0.33
RXRA-203ENST00000484822 TUBBP07437 444 aa17.12■□□□□ 0.33
RXRA-203ENST00000484822 FAM160A1Q05DH4 1040 aa17.12■□□□□ 0.33
RXRA-203ENST00000484822 AFAP1L1Q8TED9 768 aa17.12■□□□□ 0.33
RXRA-203ENST00000484822 BAG1Q99933 345 aaPredicted RBP17.12■□□□□ 0.33
RXRA-203ENST00000484822 CFAP65Q6ZU64 1925 aaKnown RBP17.12■□□□□ 0.33
RXRA-203ENST00000484822 NDUFAB1O14561 156 aa17.12■□□□□ 0.33
RXRA-203ENST00000484822 TERF1P54274 439 aa17.12■□□□□ 0.33
RXRA-203ENST00000484822 KIF5BP33176 963 aa17.12■□□□□ 0.33
RXRA-203ENST00000484822 GRIPAP1Q4V328 841 aa17.11■□□□□ 0.33
RXRA-203ENST00000484822 USP26Q9BXU7 913 aa17.11■□□□□ 0.33
RXRA-203ENST00000484822 PLEKHG1Q9ULL1 1385 aa17.11■□□□□ 0.33
RXRA-203ENST00000484822 CABP5Q9NP86 173 aa17.11■□□□□ 0.33
RXRA-203ENST00000484822 UQCRFS1P1P0C7P4 283 aa17.11■□□□□ 0.33
RXRA-203ENST00000484822 IQCGQ9H095 443 aaKnown RBP17.11■□□□□ 0.33
RXRA-203ENST00000484822 SLAIN2Q9P270 581 aa17.11■□□□□ 0.33
RXRA-203ENST00000484822 UBXN1Q04323 297 aa17.1■□□□□ 0.33
RXRA-203ENST00000484822 SETDB2Q96T68 719 aa17.1■□□□□ 0.33
RXRA-203ENST00000484822 BCL2L12Q9HB09 334 aa17.1■□□□□ 0.33
RXRA-203ENST00000484822 ATP8B2P98198 1209 aa17.1■□□□□ 0.33
RXRA-203ENST00000484822 CCDC97Q96F63 343 aaPredicted RBP17.1■□□□□ 0.33
RXRA-203ENST00000484822 CCDC77Q9BR77 488 aa17.1■□□□□ 0.33
RXRA-203ENST00000484822 ZBTB40Q9NUA8 1239 aa17.1■□□□□ 0.33
RXRA-203ENST00000484822 INPP5BP32019 993 aa17.1■□□□□ 0.33
RXRA-203ENST00000484822 ZNF445P59923 1031 aa17.1■□□□□ 0.33
RXRA-203ENST00000484822 SAMD15Q9P1V8 674 aa17.1■□□□□ 0.33
RXRA-203ENST00000484822 RASAL2Q9UJF2 1139 aa17.1■□□□□ 0.33
RXRA-203ENST00000484822 HLA-DOAP06340 250 aa17.1■□□□□ 0.33
RXRA-203ENST00000484822 CPA1P15085 419 aa17.1■□□□□ 0.33
RXRA-203ENST00000484822 HPDP32754 393 aaPredicted RBP17.1■□□□□ 0.33
RXRA-203ENST00000484822 GSTO1P78417 241 aa17.1■□□□□ 0.33
RXRA-203ENST00000484822 A0A1B0GVL5 298 aa17.09■□□□□ 0.33
RXRA-203ENST00000484822 BAG3O95817 575 aa17.09■□□□□ 0.33
RXRA-203ENST00000484822 NBPF7P0C2Y1 421 aaPredicted RBP17.09■□□□□ 0.33
RXRA-203ENST00000484822 TRAF1Q13077 416 aa17.09■□□□□ 0.33
RXRA-203ENST00000484822 PLEKHM2Q8IWE5 1019 aa17.09■□□□□ 0.33
RXRA-203ENST00000484822 TSPYL6Q8N831 410 aa17.09■□□□□ 0.33
RXRA-203ENST00000484822 TTC14Q96N46 770 aa17.09■□□□□ 0.33
RXRA-203ENST00000484822 TSPY2A6NKD2 308 aa17.09■□□□□ 0.33
RXRA-203ENST00000484822 CHST3Q7LGC8 479 aa17.09■□□□□ 0.33
RXRA-203ENST00000484822 WTAPQ15007 396 aa17.09■□□□□ 0.33
RXRA-203ENST00000484822 WDR78Q5VTH9 848 aa17.09■□□□□ 0.33
RXRA-203ENST00000484822 DAAM2Q86T65 1068 aa17.09■□□□□ 0.33
RXRA-203ENST00000484822 ACTN2P35609 894 aa17.09■□□□□ 0.33
RXRA-203ENST00000484822 CCDC122Q5T0U0 273 aa17.09■□□□□ 0.33
RXRA-203ENST00000484822 SYCP3Q8IZU3 236 aa17.09■□□□□ 0.33
RXRA-203ENST00000484822 PLVAPQ9BX97 442 aa17.09■□□□□ 0.33
RXRA-203ENST00000484822 STMN4Q9H169 189 aaPredicted RBP17.09■□□□□ 0.33
RXRA-203ENST00000484822 NMIQ13287 307 aaPredicted RBP17.08■□□□□ 0.33
RXRA-203ENST00000484822 MYOM2P54296 1465 aa17.08■□□□□ 0.33
RXRA-203ENST00000484822 ARAP3Q8WWN8 1544 aa17.08■□□□□ 0.33
RXRA-203ENST00000484822 HOXB7P09629 217 aa17.08■□□□□ 0.32
RXRA-203ENST00000484822 ASIC1P78348 528 aa17.08■□□□□ 0.32
RXRA-203ENST00000484822 SLC4A8Q2Y0W8 1093 aa17.08■□□□□ 0.32
RXRA-203ENST00000484822 MYL5Q02045 173 aa17.08■□□□□ 0.32
RXRA-203ENST00000484822 SMC6Q96SB8 1091 aa17.08■□□□□ 0.32
RXRA-203ENST00000484822 DCTPP1Q9H773 170 aa17.08■□□□□ 0.32
RXRA-203ENST00000484822 LUC7L2Q9Y383 392 aaKnown RBP17.08■□□□□ 0.32
RXRA-203ENST00000484822 IL15P40933 162 aaPredicted RBP17.08■□□□□ 0.32
RXRA-203ENST00000484822 FAM173BQ6P4H8 233 aa17.08■□□□□ 0.32
RXRA-203ENST00000484822 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.08■□□□□ 0.32
RXRA-203ENST00000484822 CLEC11AQ9Y240 323 aa17.08■□□□□ 0.32
RXRA-203ENST00000484822 PARP3Q9Y6F1 533 aa17.08■□□□□ 0.32
RXRA-203ENST00000484822 BMP15O95972 392 aa17.07■□□□□ 0.32
RXRA-203ENST00000484822 CLNS1AP54105 237 aaKnown RBP17.07■□□□□ 0.32
RXRA-203ENST00000484822 CHMP4BP1P59074 171 aa17.07■□□□□ 0.32
RXRA-203ENST00000484822 LMBR1LQ6UX01 489 aa17.07■□□□□ 0.32
RXRA-203ENST00000484822 NLRP3Q96P20 1036 aa17.07■□□□□ 0.32
RXRA-203ENST00000484822 NYXQ9GZU5 481 aa17.07■□□□□ 0.32
RXRA-203ENST00000484822 B4GALNT4Q76KP1 1039 aa17.07■□□□□ 0.32
RXRA-203ENST00000484822 DZIP3Q86Y13 1208 aaKnown RBP17.07■□□□□ 0.32
RXRA-203ENST00000484822 RGS22Q8NE09 1264 aa17.07■□□□□ 0.32
RXRA-203ENST00000484822 KCNK9Q9NPC2 374 aa17.07■□□□□ 0.32
RXRA-203ENST00000484822 STK32BQ9NY57 414 aa17.07■□□□□ 0.32
RXRA-203ENST00000484822 SPATA31E1Q6ZUB1 1445 aa17.07■□□□□ 0.32
RXRA-203ENST00000484822 PTPDC1A2A3K4 754 aa17.07■□□□□ 0.32
RXRA-203ENST00000484822 OAS2P29728 719 aaKnown RBP17.07■□□□□ 0.32
RXRA-203ENST00000484822 PPARDQ03181 441 aa17.07■□□□□ 0.32
RXRA-203ENST00000484822 APOBRQ0VD83 1088 aa17.07■□□□□ 0.32
RXRA-203ENST00000484822 DDX21Q9NR30 783 aaKnown RBP eCLIP17.07■□□□□ 0.32
RXRA-203ENST00000484822 MCMDC2Q4G0Z9 681 aa17.07■□□□□ 0.32
RXRA-203ENST00000484822 KAT14Q9H8E8 782 aa17.07■□□□□ 0.32
RXRA-203ENST00000484822 CPSF2Q9P2I0 782 aaKnown RBP17.07■□□□□ 0.32
RXRA-203ENST00000484822 ERCC6L2Q5T890 1561 aa17.07■□□□□ 0.32
RXRA-203ENST00000484822 NIP7Q9Y221 180 aaKnown RBP eCLIP17.06■□□□□ 0.32
RXRA-203ENST00000484822 AKR1B15C9JRZ8 316 aaPredicted RBP17.06■□□□□ 0.32
RXRA-203ENST00000484822 LACTBP83111 547 aaPredicted RBP17.06■□□□□ 0.32
RXRA-203ENST00000484822 RTN1Q16799 776 aa17.06■□□□□ 0.32
RXRA-203ENST00000484822 CCDC25Q86WR0 208 aa17.06■□□□□ 0.32
RXRA-203ENST00000484822 STIM2Q9P246 746 aa17.06■□□□□ 0.32
RXRA-203ENST00000484822 NLRP1Q9C000 1473 aa17.06■□□□□ 0.32
RXRA-203ENST00000484822 ZNF75DP51815 510 aa17.06■□□□□ 0.32
RXRA-203ENST00000484822 CREB3L3Q68CJ9 461 aa17.06■□□□□ 0.32
RXRA-203ENST00000484822 OGFOD1Q8N543 542 aa17.06■□□□□ 0.32
RXRA-203ENST00000484822 INSRP06213 1382 aa17.06■□□□□ 0.32
RXRA-203ENST00000484822 CLGNO14967 610 aa17.06■□□□□ 0.32
RXRA-203ENST00000484822 CNGA4Q8IV77 575 aa17.06■□□□□ 0.32
RXRA-203ENST00000484822 TRIM75PA6NK02 468 aa17.05■□□□□ 0.32
RXRA-203ENST00000484822 CCDC172P0C7W6 258 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms