RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 SOCS7O14512 581 aa24.56■■□□□ 1.52
VCPKMT-203ENST00000484763 MECOMQ03112 1051 aa24.56■■□□□ 1.52
VCPKMT-203ENST00000484763 NAA16Q6N069 864 aaPredicted RBP24.56■■□□□ 1.52
VCPKMT-203ENST00000484763 DZIP1Q86YF9 867 aaKnown RBP24.56■■□□□ 1.52
VCPKMT-203ENST00000484763 PSME4Q14997 1843 aa24.56■■□□□ 1.52
VCPKMT-203ENST00000484763 CYP7A1P22680 504 aa24.55■■□□□ 1.52
VCPKMT-203ENST00000484763 MCCP23508 829 aa24.55■■□□□ 1.52
VCPKMT-203ENST00000484763 PTH1RQ03431 593 aa24.55■■□□□ 1.52
VCPKMT-203ENST00000484763 TTLL5Q6EMB2 1281 aa24.55■■□□□ 1.52
VCPKMT-203ENST00000484763 FBXW7Q969H0 707 aa24.55■■□□□ 1.52
VCPKMT-203ENST00000484763 SYT17Q9BSW7 474 aa24.55■■□□□ 1.52
VCPKMT-203ENST00000484763 GPAA1O43292 621 aa24.54■■□□□ 1.52
VCPKMT-203ENST00000484763 LARGE2Q8N3Y3 721 aa24.54■■□□□ 1.52
VCPKMT-203ENST00000484763 LTBP3Q9NS15 1303 aa24.54■■□□□ 1.52
VCPKMT-203ENST00000484763 NFKBIEO00221 500 aa24.54■■□□□ 1.52
VCPKMT-203ENST00000484763 IARSP41252 1262 aaKnown RBP24.54■■□□□ 1.52
VCPKMT-203ENST00000484763 ZNF384Q8TF68 577 aa24.54■■□□□ 1.52
VCPKMT-203ENST00000484763 AIDAQ96BJ3 306 aa24.54■■□□□ 1.52
VCPKMT-203ENST00000484763 MAP4K1Q92918 833 aa24.53■■□□□ 1.52
VCPKMT-203ENST00000484763 SUGT1Q9Y2Z0 365 aa24.53■■□□□ 1.52
VCPKMT-203ENST00000484763 STRIP1Q5VSL9 837 aa24.52■■□□□ 1.52
VCPKMT-203ENST00000484763 DSCC1Q9BVC3 393 aa24.52■■□□□ 1.52
VCPKMT-203ENST00000484763 COL4A5P29400 1685 aa24.52■■□□□ 1.52
VCPKMT-203ENST00000484763 GSTO1P78417 241 aa24.51■■□□□ 1.51
VCPKMT-203ENST00000484763 ADGRA1Q86SQ6 560 aa24.51■■□□□ 1.51
VCPKMT-203ENST00000484763 MYH2Q9UKX2 1941 aa24.51■■□□□ 1.51
VCPKMT-203ENST00000484763 MBD4O95243 580 aa24.51■■□□□ 1.51
VCPKMT-203ENST00000484763 HSPA4P34932 840 aa24.51■■□□□ 1.51
VCPKMT-203ENST00000484763 GRIK5Q16478 980 aa24.51■■□□□ 1.51
VCPKMT-203ENST00000484763 RBM8AQ9Y5S9 174 aaKnown RBP24.51■■□□□ 1.51
VCPKMT-203ENST00000484763 USP17L3A6NCW0 530 aa24.5■■□□□ 1.51
VCPKMT-203ENST00000484763 USP17L4A6NCW7 530 aa24.5■■□□□ 1.51
VCPKMT-203ENST00000484763 HSPD1P10809 573 aaKnown RBP24.5■■□□□ 1.51
VCPKMT-203ENST00000484763 FKBP1AP62942 108 aaKnown RBP24.5■■□□□ 1.51
VCPKMT-203ENST00000484763 VPS53Q5VIR6 699 aa24.5■■□□□ 1.51
VCPKMT-203ENST00000484763 USP17L1Q7RTZ2 530 aa24.5■■□□□ 1.51
VCPKMT-203ENST00000484763 YDJCA8MPS7 323 aa24.49■■□□□ 1.51
VCPKMT-203ENST00000484763 NIM1KQ8IY84 436 aa24.49■■□□□ 1.51
VCPKMT-203ENST00000484763 CERS5Q8N5B7 392 aa24.49■■□□□ 1.51
VCPKMT-203ENST00000484763 MIGA1Q8NAN2 632 aa24.49■■□□□ 1.51
VCPKMT-203ENST00000484763 KCNQ5Q9NR82 932 aa24.49■■□□□ 1.51
VCPKMT-203ENST00000484763 MAGEB6P1A0A0J9YX57 407 aa24.49■■□□□ 1.51
VCPKMT-203ENST00000484763 ANP32AP39687 249 aaKnown RBP24.49■■□□□ 1.51
VCPKMT-203ENST00000484763 DACT2Q5SW24 774 aa24.49■■□□□ 1.51
VCPKMT-203ENST00000484763 STRBPQ96SI9 672 aaKnown RBP24.49■■□□□ 1.51
VCPKMT-203ENST00000484763 U3KPZ7 1027 aaPredicted RBP24.49■■□□□ 1.51
VCPKMT-203ENST00000484763 ARMT1Q9H993 441 aa24.48■■□□□ 1.51
VCPKMT-203ENST00000484763 LDHCP07864 332 aa24.47■■□□□ 1.51
VCPKMT-203ENST00000484763 ANAPC15P60006 121 aa24.47■■□□□ 1.51
VCPKMT-203ENST00000484763 SLF2Q8IX21 1173 aa24.47■■□□□ 1.51
VCPKMT-203ENST00000484763 LCORLQ8N3X6 602 aa24.47■■□□□ 1.51
VCPKMT-203ENST00000484763 GNAT2P19087 354 aa24.47■■□□□ 1.51
VCPKMT-203ENST00000484763 RASSF7Q02833 373 aa24.47■■□□□ 1.51
VCPKMT-203ENST00000484763 NECTIN1Q15223 517 aa24.47■■□□□ 1.51
VCPKMT-203ENST00000484763 RIOK1Q9BRS2 568 aaKnown RBP24.47■■□□□ 1.51
VCPKMT-203ENST00000484763 ZNRF3Q9ULT6 936 aa24.47■■□□□ 1.51
VCPKMT-203ENST00000484763 MROH7-TTC4A0A0A0MT08 1334 aa24.46■■□□□ 1.51
VCPKMT-203ENST00000484763 DIXDC1Q155Q3 683 aa24.46■■□□□ 1.51
VCPKMT-203ENST00000484763 JDP2Q8WYK2 163 aa24.46■■□□□ 1.51
VCPKMT-203ENST00000484763 MXD3Q9BW11 206 aa24.46■■□□□ 1.51
VCPKMT-203ENST00000484763 PALD1Q9ULE6 856 aa24.46■■□□□ 1.51
VCPKMT-203ENST00000484763 FOXP2O15409 715 aa24.45■■□□□ 1.5
VCPKMT-203ENST00000484763 RNF20Q5VTR2 975 aa24.45■■□□□ 1.5
VCPKMT-203ENST00000484763 KIF2CQ99661 725 aa24.45■■□□□ 1.5
VCPKMT-203ENST00000484763 AATFQ9NY61 560 aaKnown RBP eCLIP24.45■■□□□ 1.5
VCPKMT-203ENST00000484763 TTF2Q9UNY4 1162 aaKnown RBP24.45■■□□□ 1.5
VCPKMT-203ENST00000484763 CREB3L3Q68CJ9 461 aa24.44■■□□□ 1.5
VCPKMT-203ENST00000484763 IL17RAQ96F46 866 aa24.44■■□□□ 1.5
VCPKMT-203ENST00000484763 NOL10Q9BSC4 688 aaKnown RBP24.44■■□□□ 1.5
VCPKMT-203ENST00000484763 F8W031 263 aaPredicted RBP24.43■■□□□ 1.5
VCPKMT-203ENST00000484763 DYNLL1P63167 89 aaKnown RBP24.43■■□□□ 1.5
VCPKMT-203ENST00000484763 KCNB2Q92953 911 aa24.43■■□□□ 1.5
VCPKMT-203ENST00000484763 FAM163AQ96GL9 167 aaPredicted RBP24.43■■□□□ 1.5
VCPKMT-203ENST00000484763 SLC4A4Q9Y6R1 1079 aa24.43■■□□□ 1.5
VCPKMT-203ENST00000484763 GAKO14976 1311 aa24.43■■□□□ 1.5
VCPKMT-203ENST00000484763 MYO3BQ8WXR4 1341 aa24.43■■□□□ 1.5
VCPKMT-203ENST00000484763 RPAP1Q9BWH6 1393 aaPredicted RBP24.43■■□□□ 1.5
VCPKMT-203ENST00000484763 PATL2C9JE40 543 aaKnown RBP24.42■■□□□ 1.5
VCPKMT-203ENST00000484763 SLC27A2O14975 620 aa24.42■■□□□ 1.5
VCPKMT-203ENST00000484763 BAG3O95817 575 aa24.42■■□□□ 1.5
VCPKMT-203ENST00000484763 ZKSCAN1P17029 563 aaPredicted RBP24.42■■□□□ 1.5
VCPKMT-203ENST00000484763 CERS3Q8IU89 383 aa24.42■■□□□ 1.5
VCPKMT-203ENST00000484763 CTNNA3Q9UI47 895 aa24.42■■□□□ 1.5
VCPKMT-203ENST00000484763 LAMA4Q16363 1823 aa24.42■■□□□ 1.5
VCPKMT-203ENST00000484763 APPP05067 770 aa24.42■■□□□ 1.5
VCPKMT-203ENST00000484763 ARHGAP27Q6ZUM4 889 aa24.42■■□□□ 1.5
VCPKMT-203ENST00000484763 SNX14Q9Y5W7 946 aa24.42■■□□□ 1.5
VCPKMT-203ENST00000484763 ZMYM6O95789 1325 aa24.42■■□□□ 1.5
VCPKMT-203ENST00000484763 RAD17O75943 681 aa24.41■■□□□ 1.5
VCPKMT-203ENST00000484763 RASEFQ8IZ41 740 aa24.41■■□□□ 1.5
VCPKMT-203ENST00000484763 DICER1Q9UPY3 1922 aaKnown RBP24.41■■□□□ 1.5
VCPKMT-203ENST00000484763 ADAMTSL1Q8N6G6 1762 aa24.4■■□□□ 1.5
VCPKMT-203ENST00000484763 PSMD14O00487 310 aa24.4■■□□□ 1.5
VCPKMT-203ENST00000484763 FGAP02671 866 aa24.4■■□□□ 1.5
VCPKMT-203ENST00000484763 VIL1P09327 827 aaKnown RBP24.4■■□□□ 1.5
VCPKMT-203ENST00000484763 PPP4CP60510 307 aa24.4■■□□□ 1.5
VCPKMT-203ENST00000484763 RABEP1Q15276 862 aa24.4■■□□□ 1.5
VCPKMT-203ENST00000484763 RSBN1LQ6PCB5 846 aaPredicted RBP24.4■■□□□ 1.5
VCPKMT-203ENST00000484763 KIAA0825Q8IV33 1275 aa24.4■■□□□ 1.5
VCPKMT-203ENST00000484763 CRNKL1Q9BZJ0 848 aaKnown RBP24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms