RNA–Protein interactions for RNA: ENST00000484752.5

RFTN1-210, Transcript of raftlin, lipid raft linker 1, human

TSL 4

Gene RFTN1, Length 513 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFTN1-210	ENST00000484752	ZMYM1	Q5SVZ6	1142 aa		13.92	□□□□□ -0.18
RFTN1-210	ENST00000484752	FER1L6	Q2WGJ9	1857 aa		13.92	□□□□□ -0.18
RFTN1-210	ENST00000484752	SGSM2	O43147	1006 aa		13.91	□□□□□ -0.18
RFTN1-210	ENST00000484752	BAG3	O95817	575 aa		13.91	□□□□□ -0.18
RFTN1-210	ENST00000484752	CYP7A1	P22680	504 aa		13.91	□□□□□ -0.18
RFTN1-210	ENST00000484752	PRDX5	P30044	214 aa		13.91	□□□□□ -0.18
RFTN1-210	ENST00000484752	MMP14	P50281	582 aa		13.91	□□□□□ -0.18
RFTN1-210	ENST00000484752	RASSF7	Q02833	373 aa		13.91	□□□□□ -0.18
RFTN1-210	ENST00000484752	FAM227B	Q96M60	508 aa		13.91	□□□□□ -0.18
RFTN1-210	ENST00000484752	ANO2	Q9NQ90	1003 aa		13.91	□□□□□ -0.18
RFTN1-210	ENST00000484752	CCDC171	Q6TFL3	1326 aa		13.9	□□□□□ -0.18
RFTN1-210	ENST00000484752		A0A0D9SFI3	127 aa		13.9	□□□□□ -0.18
RFTN1-210	ENST00000484752	GNAT2	P19087	354 aa		13.9	□□□□□ -0.18
RFTN1-210	ENST00000484752	MECOM	Q03112	1051 aa		13.9	□□□□□ -0.18
RFTN1-210	ENST00000484752	CIAPIN1	Q6FI81	312 aa		13.9	□□□□□ -0.18
RFTN1-210	ENST00000484752	NSUN4	Q96CB9	384 aa	Known RBP	13.9	□□□□□ -0.18
RFTN1-210	ENST00000484752	DDRGK1	Q96HY6	314 aa		13.9	□□□□□ -0.18
RFTN1-210	ENST00000484752	HDAC9	Q9UKV0	1011 aa		13.9	□□□□□ -0.18
RFTN1-210	ENST00000484752	MAST2	Q6P0Q8	1798 aa		13.9	□□□□□ -0.18
RFTN1-210	ENST00000484752	DOCK2	Q92608	1830 aa		13.9	□□□□□ -0.18
RFTN1-210	ENST00000484752	PLCG2	P16885	1265 aa		13.89	□□□□□ -0.19
RFTN1-210	ENST00000484752	DACT2	Q5SW24	774 aa		13.89	□□□□□ -0.19
RFTN1-210	ENST00000484752	RSBN1L	Q6PCB5	846 aa	Predicted RBP	13.89	□□□□□ -0.19
RFTN1-210	ENST00000484752	OGFOD1	Q8N543	542 aa		13.89	□□□□□ -0.19
RFTN1-210	ENST00000484752	AGBL3	Q8NEM8	1001 aa		13.89	□□□□□ -0.19
RFTN1-210	ENST00000484752	TTF2	Q9UNY4	1162 aa	Known RBP	13.89	□□□□□ -0.19
RFTN1-210	ENST00000484752	MAGEB6P1	A0A0J9YX57	407 aa		13.88	□□□□□ -0.19
RFTN1-210	ENST00000484752	TCRBV5S4A2T	A0A5A2	114 aa		13.88	□□□□□ -0.19
RFTN1-210	ENST00000484752	YDJC	A8MPS7	323 aa		13.88	□□□□□ -0.19
RFTN1-210	ENST00000484752	GPAA1	O43292	621 aa		13.88	□□□□□ -0.19
RFTN1-210	ENST00000484752	RAD17	O75943	681 aa		13.88	□□□□□ -0.19
RFTN1-210	ENST00000484752	YBX3	P16989	372 aa	Known RBP eCLIP	13.88	□□□□□ -0.19
RFTN1-210	ENST00000484752	RPS12	P25398	132 aa	Known RBP	13.88	□□□□□ -0.19
RFTN1-210	ENST00000484752	HDLBP	Q00341	1268 aa	Known RBP	13.88	□□□□□ -0.19
RFTN1-210	ENST00000484752	TEKT1	Q969V4	418 aa		13.88	□□□□□ -0.19
RFTN1-210	ENST00000484752	NACAP1	Q9BZK3	213 aa		13.88	□□□□□ -0.19
RFTN1-210	ENST00000484752	MROH7-TTC4	A0A0A0MT08	1334 aa		13.88	□□□□□ -0.19
RFTN1-210	ENST00000484752	RPAP1	Q9BWH6	1393 aa	Predicted RBP	13.87	□□□□□ -0.19
RFTN1-210	ENST00000484752		F8W031	263 aa	Predicted RBP	13.87	□□□□□ -0.19
RFTN1-210	ENST00000484752	PSMD14	O00487	310 aa		13.87	□□□□□ -0.19
RFTN1-210	ENST00000484752	VIL1	P09327	827 aa	Known RBP	13.87	□□□□□ -0.19
RFTN1-210	ENST00000484752	RNF20	Q5VTR2	975 aa		13.87	□□□□□ -0.19
RFTN1-210	ENST00000484752	OSBP2	Q969R2	916 aa		13.87	□□□□□ -0.19
RFTN1-210	ENST00000484752	MRI	Q9BWK5	157 aa		13.87	□□□□□ -0.19
RFTN1-210	ENST00000484752	CRNKL1	Q9BZJ0	848 aa	Known RBP	13.87	□□□□□ -0.19
RFTN1-210	ENST00000484752	RNF181	Q9P0P0	153 aa		13.87	□□□□□ -0.19
RFTN1-210	ENST00000484752	CTNNA3	Q9UI47	895 aa		13.87	□□□□□ -0.19
RFTN1-210	ENST00000484752	MYH7	P12883	1935 aa		13.86	□□□□□ -0.19
RFTN1-210	ENST00000484752		M0R2C6	588 aa		13.86	□□□□□ -0.19
RFTN1-210	ENST00000484752	FZD9	O00144	591 aa		13.86	□□□□□ -0.19
RFTN1-210	ENST00000484752	MBD4	O95243	580 aa		13.86	□□□□□ -0.19
RFTN1-210	ENST00000484752	APP	P05067	770 aa		13.86	□□□□□ -0.19
RFTN1-210	ENST00000484752	RBM5	P52756	815 aa	Known RBP eCLIP	13.86	□□□□□ -0.19
RFTN1-210	ENST00000484752	HHIPL2	Q6UWX4	724 aa		13.86	□□□□□ -0.19
RFTN1-210	ENST00000484752	KIAA0825	Q8IV33	1275 aa		13.86	□□□□□ -0.19
RFTN1-210	ENST00000484752	FAM163A	Q96GL9	167 aa	Predicted RBP	13.86	□□□□□ -0.19
RFTN1-210	ENST00000484752	DSCC1	Q9BVC3	393 aa		13.86	□□□□□ -0.19
RFTN1-210	ENST00000484752	PUS7L	Q9H0K6	701 aa	Known RBP	13.86	□□□□□ -0.19
RFTN1-210	ENST00000484752	SERPINA10	Q9UK55	444 aa		13.86	□□□□□ -0.19
RFTN1-210	ENST00000484752		U3KPZ7	1027 aa	Predicted RBP	13.86	□□□□□ -0.19
RFTN1-210	ENST00000484752	ZC3H4	Q9UPT8	1303 aa	Known RBP	13.86	□□□□□ -0.19
RFTN1-210	ENST00000484752	CCDC88A	Q3V6T2	1871 aa		13.85	□□□□□ -0.19
RFTN1-210	ENST00000484752	ZKSCAN1	P17029	563 aa	Predicted RBP	13.85	□□□□□ -0.19
RFTN1-210	ENST00000484752	CXCL9	Q07325	125 aa		13.85	□□□□□ -0.19
RFTN1-210	ENST00000484752	DIXDC1	Q155Q3	683 aa		13.85	□□□□□ -0.19
RFTN1-210	ENST00000484752	ZNF589	Q86UQ0	364 aa	Predicted RBP	13.85	□□□□□ -0.19
RFTN1-210	ENST00000484752	AMOTL1	Q8IY63	956 aa		13.85	□□□□□ -0.19
RFTN1-210	ENST00000484752	CERS5	Q8N5B7	392 aa		13.85	□□□□□ -0.19
RFTN1-210	ENST00000484752	MIGA1	Q8NAN2	632 aa		13.85	□□□□□ -0.19
RFTN1-210	ENST00000484752	SEC62	Q99442	399 aa	Known RBP	13.85	□□□□□ -0.19
RFTN1-210	ENST00000484752	C22orf23	Q9BZE7	217 aa		13.85	□□□□□ -0.19
RFTN1-210	ENST00000484752	KCNQ5	Q9NR82	932 aa		13.85	□□□□□ -0.19
RFTN1-210	ENST00000484752	AATF	Q9NY61	560 aa	Known RBP eCLIP	13.85	□□□□□ -0.19
RFTN1-210	ENST00000484752	GAK	O14976	1311 aa		13.85	□□□□□ -0.19
RFTN1-210	ENST00000484752	USP17L8	P0C7I0	530 aa		13.84	□□□□□ -0.19
RFTN1-210	ENST00000484752	BTD	P43251	543 aa		13.84	□□□□□ -0.19
RFTN1-210	ENST00000484752	CRK	P46108	304 aa		13.84	□□□□□ -0.19
RFTN1-210	ENST00000484752	DPY19L2	Q6NUT2	758 aa		13.84	□□□□□ -0.19
RFTN1-210	ENST00000484752	CCDC129	Q6ZRS4	1044 aa		13.84	□□□□□ -0.19
RFTN1-210	ENST00000484752	GPC2	Q8N158	579 aa		13.84	□□□□□ -0.19
RFTN1-210	ENST00000484752	STRBP	Q96SI9	672 aa	Known RBP	13.84	□□□□□ -0.19
RFTN1-210	ENST00000484752	USP26	Q9BXU7	913 aa		13.84	□□□□□ -0.19
RFTN1-210	ENST00000484752	LSG1	Q9H089	658 aa	Known RBP	13.84	□□□□□ -0.19
RFTN1-210	ENST00000484752	ARMT1	Q9H993	441 aa		13.84	□□□□□ -0.19
RFTN1-210	ENST00000484752	GJA3	Q9Y6H8	435 aa		13.84	□□□□□ -0.19
RFTN1-210	ENST00000484752	SLC4A4	Q9Y6R1	1079 aa		13.84	□□□□□ -0.19
RFTN1-210	ENST00000484752	COL4A5	P29400	1685 aa		13.83	□□□□□ -0.2
RFTN1-210	ENST00000484752	GPR75-ASB3	A0A0A6YYF3	556 aa		13.83	□□□□□ -0.2
RFTN1-210	ENST00000484752	PATL2	C9JE40	543 aa	Known RBP	13.83	□□□□□ -0.2
RFTN1-210	ENST00000484752	MYO1B	O43795	1136 aa		13.83	□□□□□ -0.2
RFTN1-210	ENST00000484752	SEC24B	O95487	1268 aa		13.83	□□□□□ -0.2
RFTN1-210	ENST00000484752	CHGB	P05060	677 aa		13.83	□□□□□ -0.2
RFTN1-210	ENST00000484752	HSPD1	P10809	573 aa	Known RBP	13.83	□□□□□ -0.2
RFTN1-210	ENST00000484752	TDO2	P48775	406 aa		13.83	□□□□□ -0.2
RFTN1-210	ENST00000484752	SCNN1D	P51172	638 aa		13.83	□□□□□ -0.2
RFTN1-210	ENST00000484752	PPP4C	P60510	307 aa		13.83	□□□□□ -0.2
RFTN1-210	ENST00000484752	C9orf131	Q5VYM1	1079 aa		13.83	□□□□□ -0.2
RFTN1-210	ENST00000484752	GIMAP6	Q6P9H5	292 aa		13.83	□□□□□ -0.2
RFTN1-210	ENST00000484752	LCORL	Q8N3X6	602 aa		13.83	□□□□□ -0.2
RFTN1-210	ENST00000484752	DPF2	Q92785	391 aa		13.83	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms