RNA–Protein interactions for RNA: ENST00000484378.1

HLA-C-207, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 862 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-207ENST00000484378 ATG9AQ7Z3C6 839 aa35.42■■■■□ 3.26
HLA-C-207ENST00000484378 MEIS3Q99687 375 aa35.42■■■■□ 3.26
HLA-C-207ENST00000484378 ZBTB4Q9P1Z0 1013 aaPredicted RBP35.42■■■■□ 3.26
HLA-C-207ENST00000484378 ARHGAP45Q92619 1136 aa35.41■■■■□ 3.26
HLA-C-207ENST00000484378 FBXO3Q9UK99 471 aa35.41■■■■□ 3.26
HLA-C-207ENST00000484378 CIAO1O76071 339 aa35.4■■■■□ 3.26
HLA-C-207ENST00000484378 TM4SF4P48230 202 aa35.4■■■■□ 3.26
HLA-C-207ENST00000484378 SPRYD7Q5W111 196 aa35.4■■■■□ 3.26
HLA-C-207ENST00000484378 SLC10A4Q96EP9 437 aa35.4■■■■□ 3.26
HLA-C-207ENST00000484378 MYH13Q9UKX3 1938 aa35.4■■■■□ 3.26
HLA-C-207ENST00000484378 HDLBPQ00341 1268 aaKnown RBP35.39■■■■□ 3.26
HLA-C-207ENST00000484378 TEKT1Q969V4 418 aa35.39■■■■□ 3.26
HLA-C-207ENST00000484378 IREB2P48200 963 aaKnown RBP35.38■■■■□ 3.25
HLA-C-207ENST00000484378 CLMNQ96JQ2 1002 aa35.38■■■■□ 3.25
HLA-C-207ENST00000484378 CEP126Q9P2H0 1117 aa35.38■■■■□ 3.25
HLA-C-207ENST00000484378 MAST3O60307 1309 aa35.37■■■■□ 3.25
HLA-C-207ENST00000484378 TCP10L2B9ZVM9 353 aa35.37■■■■□ 3.25
HLA-C-207ENST00000484378 ATP2B3Q16720 1220 aa35.37■■■■□ 3.25
HLA-C-207ENST00000484378 INTS3Q68E01 1043 aaKnown RBP35.37■■■■□ 3.25
HLA-C-207ENST00000484378 TNNI2P48788 182 aa35.36■■■■□ 3.25
HLA-C-207ENST00000484378 SUGT1Q9Y2Z0 365 aa35.36■■■■□ 3.25
HLA-C-207ENST00000484378 UNCXA6NJT0 531 aa35.35■■■■□ 3.25
HLA-C-207ENST00000484378 TBC1D8O95759 1140 aa35.35■■■■□ 3.25
HLA-C-207ENST00000484378 PA2G4Q9UQ80 394 aaKnown RBP35.35■■■■□ 3.25
HLA-C-207ENST00000484378 IPO8O15397 1037 aaKnown RBP35.34■■■■□ 3.25
HLA-C-207ENST00000484378 GNAI3P08754 354 aa35.34■■■■□ 3.25
HLA-C-207ENST00000484378 IL15P40933 162 aaPredicted RBP35.34■■■■□ 3.25
HLA-C-207ENST00000484378 USP2O75604 605 aaPredicted RBP35.33■■■■□ 3.25
HLA-C-207ENST00000484378 ZBTB48P10074 688 aaPredicted RBP35.33■■■■□ 3.25
HLA-C-207ENST00000484378 WDR66Q8TBY9 1149 aa35.33■■■■□ 3.25
HLA-C-207ENST00000484378 WNK4Q96J92 1243 aa35.33■■■■□ 3.25
HLA-C-207ENST00000484378 ZDHHC15Q96MV8 337 aa35.33■■■■□ 3.25
HLA-C-207ENST00000484378 TMEM39BQ9GZU3 492 aa35.33■■■■□ 3.25
HLA-C-207ENST00000484378 MANSC4A6NHS7 340 aaPredicted RBP35.32■■■■□ 3.24
HLA-C-207ENST00000484378 ANKRD13AQ8IZ07 590 aa35.32■■■■□ 3.24
HLA-C-207ENST00000484378 FRAT1Q92837 279 aaPredicted RBP35.32■■■■□ 3.24
HLA-C-207ENST00000484378 TEPSINQ96N21 525 aa35.32■■■■□ 3.24
HLA-C-207ENST00000484378 TMOD2Q9NZR1 351 aa35.32■■■■□ 3.24
HLA-C-207ENST00000484378 OTOFQ9HC10 1997 aa35.31■■■■□ 3.24
HLA-C-207ENST00000484378 CTU1Q7Z7A3 348 aaKnown RBP35.31■■■■□ 3.24
HLA-C-207ENST00000484378 CDAN1Q8IWY9 1227 aa35.31■■■■□ 3.24
HLA-C-207ENST00000484378 COPRSQ9NQ92 184 aa35.31■■■■□ 3.24
HLA-C-207ENST00000484378 BCAR3O75815 825 aa35.3■■■■□ 3.24
HLA-C-207ENST00000484378 TRIM27P14373 513 aa35.3■■■■□ 3.24
HLA-C-207ENST00000484378 CACNB3P54284 484 aa35.3■■■■□ 3.24
HLA-C-207ENST00000484378 MIER1Q8N108 512 aa35.3■■■■□ 3.24
HLA-C-207ENST00000484378 MRIQ9BWK5 157 aa35.3■■■■□ 3.24
HLA-C-207ENST00000484378 GNL3LQ9NVN8 582 aaKnown RBP35.3■■■■□ 3.24
HLA-C-207ENST00000484378 HNRNPUQ00839 825 aaKnown RBP eCLIP35.29■■■■□ 3.24
HLA-C-207ENST00000484378 ATF7IPQ6VMQ6 1270 aa35.29■■■■□ 3.24
HLA-C-207ENST00000484378 INHBEP58166 350 aa35.28■■■■□ 3.24
HLA-C-207ENST00000484378 DIEXFQ68CQ4 756 aaKnown RBP35.28■■■■□ 3.24
HLA-C-207ENST00000484378 ZNF296Q8WUU4 475 aaPredicted RBP35.28■■■■□ 3.24
HLA-C-207ENST00000484378 LAMB1P07942 1786 aa35.28■■■■□ 3.24
HLA-C-207ENST00000484378 SRGAP3O43295 1099 aa35.27■■■■□ 3.24
HLA-C-207ENST00000484378 ALDH1A1P00352 501 aa35.27■■■■□ 3.24
HLA-C-207ENST00000484378 APOBEC3HQ6NTF7 200 aaKnown RBP35.26■■■■□ 3.24
HLA-C-207ENST00000484378 HHIPL2Q6UWX4 724 aa35.26■■■■□ 3.24
HLA-C-207ENST00000484378 TNNQ9UQP3 1299 aa35.26■■■■□ 3.24
HLA-C-207ENST00000484378 GPR25O00155 361 aa35.25■■■■□ 3.23
HLA-C-207ENST00000484378 CLUAP1Q96AJ1 413 aa35.25■■■■□ 3.23
HLA-C-207ENST00000484378 CFHR5Q9BXR6 569 aa35.25■■■■□ 3.23
HLA-C-207ENST00000484378 ELP3Q9H9T3 547 aa35.25■■■■□ 3.23
HLA-C-207ENST00000484378 PHKA1P46020 1223 aa35.24■■■■□ 3.23
HLA-C-207ENST00000484378 MTX1Q13505 466 aa35.24■■■■□ 3.23
HLA-C-207ENST00000484378 NOM1Q5C9Z4 860 aaKnown RBP35.24■■■■□ 3.23
HLA-C-207ENST00000484378 IFNL1Q8IU54 200 aa35.24■■■■□ 3.23
HLA-C-207ENST00000484378 GJA5P36382 358 aa35.23■■■■□ 3.23
HLA-C-207ENST00000484378 FKBP1CQ5VVH2 108 aa35.23■■■■□ 3.23
HLA-C-207ENST00000484378 FAM83AQ86UY5 434 aa35.23■■■■□ 3.23
HLA-C-207ENST00000484378 DENND2AQ9ULE3 1009 aa35.23■■■■□ 3.23
HLA-C-207ENST00000484378 SEMA3EO15041 775 aa35.22■■■■□ 3.23
HLA-C-207ENST00000484378 PRDX5P30044 214 aa35.22■■■■□ 3.23
HLA-C-207ENST00000484378 ADORA1P30542 326 aa35.22■■■■□ 3.23
HLA-C-207ENST00000484378 GNAI2P04899 355 aa35.21■■■■□ 3.23
HLA-C-207ENST00000484378 LDHBP07195 334 aaKnown RBP35.21■■■■□ 3.23
HLA-C-207ENST00000484378 OPTNQ96CV9 577 aa35.21■■■■□ 3.23
HLA-C-207ENST00000484378 IGF2BP3O00425 579 aaKnown RBP eCLIP35.2■■■■□ 3.23
HLA-C-207ENST00000484378 DIXDC1Q155Q3 683 aa35.2■■■■□ 3.23
HLA-C-207ENST00000484378 CCDC102BQ68D86 513 aa35.2■■■■□ 3.23
HLA-C-207ENST00000484378 PPP1R3FQ6ZSY5 799 aaPredicted RBP35.2■■■■□ 3.23
HLA-C-207ENST00000484378 DDX55Q8NHQ9 600 aaKnown RBP eCLIP35.2■■■■□ 3.23
HLA-C-207ENST00000484378 R3HDMLQ9H3Y0 253 aa35.2■■■■□ 3.23
HLA-C-207ENST00000484378 DAGLAQ9Y4D2 1042 aa35.2■■■■□ 3.23
HLA-C-207ENST00000484378 CSADQ9Y600 493 aa35.2■■■■□ 3.23
HLA-C-207ENST00000484378 MAP3K9P80192 1104 aa35.19■■■■□ 3.22
HLA-C-207ENST00000484378 VGLL4Q14135 290 aa35.19■■■■□ 3.22
HLA-C-207ENST00000484378 ZKSCAN2Q63HK3 967 aa35.19■■■■□ 3.22
HLA-C-207ENST00000484378 HOOK2Q96ED9 719 aa35.19■■■■□ 3.22
HLA-C-207ENST00000484378 SALL1Q9NSC2 1324 aa35.19■■■■□ 3.22
HLA-C-207ENST00000484378 RPAP1Q9BWH6 1393 aaPredicted RBP35.18■■■■□ 3.22
HLA-C-207ENST00000484378 FKTNO75072 461 aa35.18■■■■□ 3.22
HLA-C-207ENST00000484378 AKAP2Q9Y2D5 859 aa35.18■■■■□ 3.22
HLA-C-207ENST00000484378 TIMM10P62072 90 aa35.17■■■■□ 3.22
HLA-C-207ENST00000484378 TFCP2Q12800 502 aa35.17■■■■□ 3.22
HLA-C-207ENST00000484378 PKN2Q16513 984 aaKnown RBP35.17■■■■□ 3.22
HLA-C-207ENST00000484378 OTUD7BQ6GQQ9 843 aa35.17■■■■□ 3.22
HLA-C-207ENST00000484378 A0A1B0GUL7 405 aa35.16■■■■□ 3.22
HLA-C-207ENST00000484378 RGS19P49795 217 aa35.16■■■■□ 3.22
HLA-C-207ENST00000484378 ZGPATQ8N5A5 531 aaKnown RBP35.15■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms