RNA–Protein interactions for RNA: ENST00000484328.1

NCL-209, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-209ENST00000484328 LAMA4Q16363 1823 aa7.81□□□□□ -1.16
NCL-209ENST00000484328 GOLIM4O00461 696 aa7.81□□□□□ -1.16
NCL-209ENST00000484328 FRAT2O75474 233 aaPredicted RBP7.81□□□□□ -1.16
NCL-209ENST00000484328 MMP14P50281 582 aa7.81□□□□□ -1.16
NCL-209ENST00000484328 SCNN1DP51172 638 aa7.81□□□□□ -1.16
NCL-209ENST00000484328 ZNF280AP59817 542 aaPredicted RBP7.81□□□□□ -1.16
NCL-209ENST00000484328 CHAF1AQ13111 956 aaPredicted RBP7.81□□□□□ -1.16
NCL-209ENST00000484328 NSUN4Q96CB9 384 aaKnown RBP7.81□□□□□ -1.16
NCL-209ENST00000484328 EVI5LQ96CN4 794 aa7.81□□□□□ -1.16
NCL-209ENST00000484328 DNAJC2Q99543 621 aaKnown RBP7.81□□□□□ -1.16
NCL-209ENST00000484328 MXD3Q9BW11 206 aa7.81□□□□□ -1.16
NCL-209ENST00000484328 BCL11AQ9H165 835 aa7.81□□□□□ -1.16
NCL-209ENST00000484328 TCRBV5S4A2TA0A5A2 114 aa7.8□□□□□ -1.16
NCL-209ENST00000484328 GLTPD2A6NH11 291 aa7.8□□□□□ -1.16
NCL-209ENST00000484328 LDHBP07195 334 aaKnown RBP7.8□□□□□ -1.16
NCL-209ENST00000484328 SDSP20132 328 aa7.8□□□□□ -1.16
NCL-209ENST00000484328 RGS3P49796 1198 aa7.8□□□□□ -1.16
NCL-209ENST00000484328 GMPSP49915 693 aaPredicted RBP7.8□□□□□ -1.16
NCL-209ENST00000484328 HDLBPQ00341 1268 aaKnown RBP7.8□□□□□ -1.16
NCL-209ENST00000484328 MECOMQ03112 1051 aa7.8□□□□□ -1.16
NCL-209ENST00000484328 SPTY2D1Q68D10 685 aaPredicted RBP7.8□□□□□ -1.16
NCL-209ENST00000484328 TBC1D9Q6ZT07 1266 aa7.8□□□□□ -1.16
NCL-209ENST00000484328 KIAA0825Q8IV33 1275 aa7.8□□□□□ -1.16
NCL-209ENST00000484328 CNTROBQ8N137 903 aa7.8□□□□□ -1.16
NCL-209ENST00000484328 MTMR14Q8NCE2 650 aa7.8□□□□□ -1.16
NCL-209ENST00000484328 MRIQ9BWK5 157 aa7.8□□□□□ -1.16
NCL-209ENST00000484328 GPRC5DQ9NZD1 345 aa7.8□□□□□ -1.16
NCL-209ENST00000484328 ABCF2Q9UG63 623 aa7.8□□□□□ -1.16
NCL-209ENST00000484328 SERPINA10Q9UK55 444 aa7.8□□□□□ -1.16
NCL-209ENST00000484328 ZBTB12Q9Y330 459 aaPredicted RBP7.8□□□□□ -1.16
NCL-209ENST00000484328 MROH7-TTC4A0A0A0MT08 1334 aa7.79□□□□□ -1.16
NCL-209ENST00000484328 IDH1O75874 414 aaKnown RBP7.79□□□□□ -1.16
NCL-209ENST00000484328 DDNO94850 711 aaPredicted RBP7.79□□□□□ -1.16
NCL-209ENST00000484328 MAP4K4O95819 1239 aaPredicted RBP7.79□□□□□ -1.16
NCL-209ENST00000484328 ZFYP08048 801 aaPredicted RBP7.79□□□□□ -1.16
NCL-209ENST00000484328 USP17L8P0C7I0 530 aa7.79□□□□□ -1.16
NCL-209ENST00000484328 PDE6AP16499 860 aa7.79□□□□□ -1.16
NCL-209ENST00000484328 ADD2P35612 726 aa7.79□□□□□ -1.16
NCL-209ENST00000484328 MAP3K12Q12852 859 aa7.79□□□□□ -1.16
NCL-209ENST00000484328 UBE3CQ15386 1083 aa7.79□□□□□ -1.16
NCL-209ENST00000484328 HHIPL2Q6UWX4 724 aa7.79□□□□□ -1.16
NCL-209ENST00000484328 ERICH6Q7L0X2 663 aa7.79□□□□□ -1.16
NCL-209ENST00000484328 ADGRA1Q86SQ6 560 aa7.79□□□□□ -1.16
NCL-209ENST00000484328 FBXW7Q969H0 707 aa7.79□□□□□ -1.16
NCL-209ENST00000484328 FAM163AQ96GL9 167 aaPredicted RBP7.79□□□□□ -1.16
NCL-209ENST00000484328 ZBED3Q96IU2 234 aaPredicted RBP7.79□□□□□ -1.16
NCL-209ENST00000484328 ZDHHC15Q96MV8 337 aa7.79□□□□□ -1.16
NCL-209ENST00000484328 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.79□□□□□ -1.16
NCL-209ENST00000484328 LRP2BPQ9P2M1 347 aa7.79□□□□□ -1.16
NCL-209ENST00000484328 TTF2Q9UNY4 1162 aaKnown RBP7.79□□□□□ -1.16
NCL-209ENST00000484328 GJA3Q9Y6H8 435 aa7.79□□□□□ -1.16
NCL-209ENST00000484328 SIPA1L1O43166 1804 aa7.79□□□□□ -1.16
NCL-209ENST00000484328 PAPPA2Q9BXP8 1791 aa7.79□□□□□ -1.16
NCL-209ENST00000484328 SHTN1A0MZ66 631 aa7.78□□□□□ -1.16
NCL-209ENST00000484328 POTECB2RU33 542 aa7.78□□□□□ -1.16
NCL-209ENST00000484328 CHGBP05060 677 aa7.78□□□□□ -1.16
NCL-209ENST00000484328 CRKP46108 304 aa7.78□□□□□ -1.16
NCL-209ENST00000484328 GSTO1P78417 241 aa7.78□□□□□ -1.16
NCL-209ENST00000484328 DIXDC1Q155Q3 683 aa7.78□□□□□ -1.16
NCL-209ENST00000484328 ZSCAN25Q6NSZ9 544 aa7.78□□□□□ -1.16
NCL-209ENST00000484328 DPY19L2Q6NUT2 758 aa7.78□□□□□ -1.16
NCL-209ENST00000484328 DZIP1Q86YF9 867 aaKnown RBP7.78□□□□□ -1.16
NCL-209ENST00000484328 MICALL2Q8IY33 904 aa7.78□□□□□ -1.16
NCL-209ENST00000484328 FSD1Q9BTV5 496 aa7.78□□□□□ -1.16
NCL-209ENST00000484328 MYOZ2Q9NPC6 264 aa7.78□□□□□ -1.16
NCL-209ENST00000484328 RAI14Q9P0K7 980 aa7.78□□□□□ -1.16
NCL-209ENST00000484328 DAGLAQ9Y4D2 1042 aa7.78□□□□□ -1.16
NCL-209ENST00000484328 COL2A1P02458 1487 aaPredicted RBP7.78□□□□□ -1.16
NCL-209ENST00000484328 ZNF532Q9HCE3 1301 aa7.78□□□□□ -1.16
NCL-209ENST00000484328 GPR75-ASB3A0A0A6YYF3 556 aa7.77□□□□□ -1.17
NCL-209ENST00000484328 SPDYE2BA6NHP3 402 aa7.77□□□□□ -1.17
NCL-209ENST00000484328 TRIM6-TRIM34B2RNG4 842 aa7.77□□□□□ -1.17
NCL-209ENST00000484328 RNF113AO15541 343 aaKnown RBP7.77□□□□□ -1.17
NCL-209ENST00000484328 EGFRP00533 1210 aa7.77□□□□□ -1.17
NCL-209ENST00000484328 SPDYE6P0CI01 402 aa7.77□□□□□ -1.17
NCL-209ENST00000484328 LRRFIP1Q32MZ4 808 aaKnown RBP7.77□□□□□ -1.17
NCL-209ENST00000484328 ZMYM1Q5SVZ6 1142 aa7.77□□□□□ -1.17
NCL-209ENST00000484328 SLC9C2Q5TAH2 1124 aa7.77□□□□□ -1.17
NCL-209ENST00000484328 NAA16Q6N069 864 aaPredicted RBP7.77□□□□□ -1.17
NCL-209ENST00000484328 APOBEC3HQ6NTF7 200 aaKnown RBP7.77□□□□□ -1.17
NCL-209ENST00000484328 CERS3Q8IU89 383 aa7.77□□□□□ -1.17
NCL-209ENST00000484328 SLF2Q8IX21 1173 aa7.77□□□□□ -1.17
NCL-209ENST00000484328 OGFOD1Q8N543 542 aa7.77□□□□□ -1.17
NCL-209ENST00000484328 MAGEB6Q8N7X4 407 aa7.77□□□□□ -1.17
NCL-209ENST00000484328 APPBP2Q92624 585 aa7.77□□□□□ -1.17
NCL-209ENST00000484328 TEKT1Q969V4 418 aa7.77□□□□□ -1.17
NCL-209ENST00000484328 RIOK1Q9BRS2 568 aaKnown RBP7.77□□□□□ -1.17
NCL-209ENST00000484328 ADARB2Q9NS39 739 aaKnown RBP7.77□□□□□ -1.17
NCL-209ENST00000484328 CNOT7Q9UIV1 285 aaKnown RBP7.77□□□□□ -1.17
NCL-209ENST00000484328 HDAC9Q9UKV0 1011 aa7.77□□□□□ -1.17
NCL-209ENST00000484328 RAD50Q92878 1312 aa7.77□□□□□ -1.17
NCL-209ENST00000484328 MYH1P12882 1939 aa7.76□□□□□ -1.17
NCL-209ENST00000484328 RPAP1Q9BWH6 1393 aaPredicted RBP7.76□□□□□ -1.17
NCL-209ENST00000484328 A0A0D9SFI3 127 aa7.76□□□□□ -1.17
NCL-209ENST00000484328 IQCA1LA6NCM1 817 aa7.76□□□□□ -1.17
NCL-209ENST00000484328 F8W031 263 aaPredicted RBP7.76□□□□□ -1.17
NCL-209ENST00000484328 HIP1O00291 1037 aa7.76□□□□□ -1.17
NCL-209ENST00000484328 CYP7A1P22680 504 aa7.76□□□□□ -1.17
NCL-209ENST00000484328 CHMLP26374 656 aa7.76□□□□□ -1.17
NCL-209ENST00000484328 LMOD1P29536 600 aaPredicted RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms