RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 FKBP1AP62942 108 aaKnown RBP12.53□□□□□ -0.4
CPSF4-213ENST00000484112 CCDC57Q2TAC2 916 aa12.53□□□□□ -0.4
CPSF4-213ENST00000484112 HABP4Q5JVS0 413 aaKnown RBP12.53□□□□□ -0.4
CPSF4-213ENST00000484112 LDHAL6AQ6ZMR3 332 aa12.53□□□□□ -0.4
CPSF4-213ENST00000484112 OPTNQ96CV9 577 aa12.53□□□□□ -0.4
CPSF4-213ENST00000484112 PTPN18Q99952 460 aa12.53□□□□□ -0.4
CPSF4-213ENST00000484112 TDRD3Q9H7E2 651 aaKnown RBP12.53□□□□□ -0.4
CPSF4-213ENST00000484112 TCP10L2B9ZVM9 353 aa12.52□□□□□ -0.41
CPSF4-213ENST00000484112 EPHA10Q5JZY3 1008 aa12.52□□□□□ -0.41
CPSF4-213ENST00000484112 MFSD14BQ5SR56 506 aa12.52□□□□□ -0.41
CPSF4-213ENST00000484112 TMEM106CQ9BVX2 250 aa12.52□□□□□ -0.41
CPSF4-213ENST00000484112 ZNF70Q9UC06 446 aaPredicted RBP12.52□□□□□ -0.41
CPSF4-213ENST00000484112 TTF2Q9UNY4 1162 aaKnown RBP12.52□□□□□ -0.41
CPSF4-213ENST00000484112 MYCP01106 439 aaPredicted RBP12.51□□□□□ -0.41
CPSF4-213ENST00000484112 GYG1P46976 350 aa12.51□□□□□ -0.41
CPSF4-213ENST00000484112 CAP1Q01518 475 aa12.51□□□□□ -0.41
CPSF4-213ENST00000484112 TNFAIP1Q13829 316 aa12.51□□□□□ -0.41
CPSF4-213ENST00000484112 ATF7IPQ6VMQ6 1270 aa12.51□□□□□ -0.41
CPSF4-213ENST00000484112 CNKSR2Q8WXI2 1034 aa12.51□□□□□ -0.41
CPSF4-213ENST00000484112 CCL15-CCL14A0A0B4J2E2 113 aa12.5□□□□□ -0.41
CPSF4-213ENST00000484112 TESPA1A2RU30 521 aaPredicted RBP12.5□□□□□ -0.41
CPSF4-213ENST00000484112 HIBADHP31937 336 aaKnown RBP12.5□□□□□ -0.41
CPSF4-213ENST00000484112 TAF1CQ15572 869 aaPredicted RBP12.5□□□□□ -0.41
CPSF4-213ENST00000484112 CCL15Q16663 113 aa12.5□□□□□ -0.41
CPSF4-213ENST00000484112 SPDYE2Q495Y8 402 aa12.5□□□□□ -0.41
CPSF4-213ENST00000484112 ZKSCAN2Q63HK3 967 aa12.5□□□□□ -0.41
CPSF4-213ENST00000484112 CDAN1Q8IWY9 1227 aa12.5□□□□□ -0.41
CPSF4-213ENST00000484112 DZIP1LQ8IYY4 767 aaKnown RBP12.5□□□□□ -0.41
CPSF4-213ENST00000484112 ARMC5Q96C12 935 aa12.5□□□□□ -0.41
CPSF4-213ENST00000484112 TMEM39BQ9GZU3 492 aa12.5□□□□□ -0.41
CPSF4-213ENST00000484112 ZFYVE28Q9HCC9 887 aa12.5□□□□□ -0.41
CPSF4-213ENST00000484112 FAM205AQ6ZU69 1335 aa12.49□□□□□ -0.41
CPSF4-213ENST00000484112 ECM2O94769 699 aaPredicted RBP12.49□□□□□ -0.41
CPSF4-213ENST00000484112 NBPF7P0C2Y1 421 aaPredicted RBP12.49□□□□□ -0.41
CPSF4-213ENST00000484112 MS4A1P11836 297 aa12.49□□□□□ -0.41
CPSF4-213ENST00000484112 CRKP46108 304 aa12.49□□□□□ -0.41
CPSF4-213ENST00000484112 TNNI2P48788 182 aa12.49□□□□□ -0.41
CPSF4-213ENST00000484112 MAP3K9P80192 1104 aa12.49□□□□□ -0.41
CPSF4-213ENST00000484112 ARHGEF6Q15052 776 aa12.49□□□□□ -0.41
CPSF4-213ENST00000484112 SLC4A8Q2Y0W8 1093 aa12.49□□□□□ -0.41
CPSF4-213ENST00000484112 RABL6Q3YEC7 729 aaPredicted RBP12.49□□□□□ -0.41
CPSF4-213ENST00000484112 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.49□□□□□ -0.41
CPSF4-213ENST00000484112 TDRD7Q8NHU6 1098 aaKnown RBP12.49□□□□□ -0.41
CPSF4-213ENST00000484112 BRI3BPQ8WY22 251 aa12.49□□□□□ -0.41
CPSF4-213ENST00000484112 OTUD5Q96G74 571 aa12.49□□□□□ -0.41
CPSF4-213ENST00000484112 MS4A4AQ96JQ5 239 aa12.49□□□□□ -0.41
CPSF4-213ENST00000484112 USP44Q9H0E7 712 aa12.49□□□□□ -0.41
CPSF4-213ENST00000484112 SERPINA10Q9UK55 444 aa12.49□□□□□ -0.41
CPSF4-213ENST00000484112 IQSEC3Q9UPP2 1182 aaPredicted RBP12.49□□□□□ -0.41
CPSF4-213ENST00000484112 CSADQ9Y600 493 aa12.49□□□□□ -0.41
CPSF4-213ENST00000484112 BCAR3O75815 825 aa12.48□□□□□ -0.41
CPSF4-213ENST00000484112 TRIM27P14373 513 aa12.48□□□□□ -0.41
CPSF4-213ENST00000484112 GTF2A2P52657 109 aa12.48□□□□□ -0.41
CPSF4-213ENST00000484112 CHAF1AQ13111 956 aaPredicted RBP12.48□□□□□ -0.41
CPSF4-213ENST00000484112 VGLL4Q14135 290 aa12.48□□□□□ -0.41
CPSF4-213ENST00000484112 SLC9C1Q4G0N8 1177 aa12.48□□□□□ -0.41
CPSF4-213ENST00000484112 NBPF11Q86T75 865 aa12.48□□□□□ -0.41
CPSF4-213ENST00000484112 VPS37DQ86XT2 251 aa12.48□□□□□ -0.41
CPSF4-213ENST00000484112 FAM43AQ8N2R8 423 aa12.48□□□□□ -0.41
CPSF4-213ENST00000484112 FAM84BQ96KN1 310 aaPredicted RBP12.48□□□□□ -0.41
CPSF4-213ENST00000484112 TEPSINQ96N21 525 aa12.48□□□□□ -0.41
CPSF4-213ENST00000484112 PUS3Q9BZE2 481 aaKnown RBP12.48□□□□□ -0.41
CPSF4-213ENST00000484112 PTCH2Q9Y6C5 1203 aa12.48□□□□□ -0.41
CPSF4-213ENST00000484112 ECM29Q5VYK3 1845 aa12.47□□□□□ -0.41
CPSF4-213ENST00000484112 FRAT2O75474 233 aaPredicted RBP12.47□□□□□ -0.41
CPSF4-213ENST00000484112 WDHD1O75717 1129 aaPredicted RBP12.47□□□□□ -0.41
CPSF4-213ENST00000484112 GNAI3P08754 354 aa12.47□□□□□ -0.41
CPSF4-213ENST00000484112 CACNB3P54284 484 aa12.47□□□□□ -0.41
CPSF4-213ENST00000484112 UBE4AQ14139 1066 aa12.47□□□□□ -0.41
CPSF4-213ENST00000484112 GRIK5Q16478 980 aa12.47□□□□□ -0.41
CPSF4-213ENST00000484112 ZNF333Q96JL9 665 aa12.47□□□□□ -0.41
CPSF4-213ENST00000484112 UBTFL1P0CB47 393 aaPredicted RBP12.46□□□□□ -0.41
CPSF4-213ENST00000484112 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.46□□□□□ -0.41
CPSF4-213ENST00000484112 FRAT1Q92837 279 aaPredicted RBP12.46□□□□□ -0.41
CPSF4-213ENST00000484112 KAZALD1Q96I82 304 aa12.46□□□□□ -0.41
CPSF4-213ENST00000484112 SUCLG2Q96I99 432 aa12.46□□□□□ -0.41
CPSF4-213ENST00000484112 KIF22Q14807 665 aa12.45□□□□□ -0.42
CPSF4-213ENST00000484112 SH3TC2Q8TF17 1288 aa12.45□□□□□ -0.42
CPSF4-213ENST00000484112 ARHGAP39Q9C0H5 1083 aa12.45□□□□□ -0.42
CPSF4-213ENST00000484112 BICC1Q9H694 974 aaKnown RBP12.45□□□□□ -0.42
CPSF4-213ENST00000484112 FBXO3Q9UK99 471 aa12.45□□□□□ -0.42
CPSF4-213ENST00000484112 CETPP11597 493 aa12.44□□□□□ -0.42
CPSF4-213ENST00000484112 CAVIN4Q5BKX8 364 aa12.44□□□□□ -0.42
CPSF4-213ENST00000484112 FTSJ3Q8IY81 847 aaKnown RBP12.44□□□□□ -0.42
CPSF4-213ENST00000484112 ZKSCAN4Q969J2 545 aaPredicted RBP12.44□□□□□ -0.42
CPSF4-213ENST00000484112 TEKT1Q969V4 418 aa12.44□□□□□ -0.42
CPSF4-213ENST00000484112 WRNIP1Q96S55 665 aa12.44□□□□□ -0.42
CPSF4-213ENST00000484112 TMOD2Q9NZR1 351 aa12.44□□□□□ -0.42
CPSF4-213ENST00000484112 RCAN3Q9UKA8 241 aa12.44□□□□□ -0.42
CPSF4-213ENST00000484112 COLQQ9Y215 455 aaPredicted RBP12.44□□□□□ -0.42
CPSF4-213ENST00000484112 A0A1B0GUL6 1792 aa12.43□□□□□ -0.42
CPSF4-213ENST00000484112 MROH5Q6ZUA9 1318 aa12.43□□□□□ -0.42
CPSF4-213ENST00000484112 SPDYE5A6NIY4 337 aa12.43□□□□□ -0.42
CPSF4-213ENST00000484112 BTBD19C9JJ37 291 aa12.43□□□□□ -0.42
CPSF4-213ENST00000484112 TLR2O60603 784 aa12.43□□□□□ -0.42
CPSF4-213ENST00000484112 FXR1P51114 621 aaKnown RBP eCLIP12.43□□□□□ -0.42
CPSF4-213ENST00000484112 LRRC24Q50LG9 513 aa12.43□□□□□ -0.42
CPSF4-213ENST00000484112 METTL24Q5JXM2 366 aa12.43□□□□□ -0.42
CPSF4-213ENST00000484112 FBXO33Q7Z6M2 555 aa12.43□□□□□ -0.42
CPSF4-213ENST00000484112 ERO1BQ86YB8 467 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms