RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 SCNN1DP51172 638 aa16.85■□□□□ 0.29
SMAD9-204ENST00000483941 MFAP1P55081 439 aaKnown RBP16.85■□□□□ 0.29
SMAD9-204ENST00000483941 WASHC4Q2M389 1173 aa16.85■□□□□ 0.29
SMAD9-204ENST00000483941 KIAA1211Q6ZU35 1233 aa16.85■□□□□ 0.29
SMAD9-204ENST00000483941 TSKSQ9UJT2 592 aa16.85■□□□□ 0.29
SMAD9-204ENST00000483941 RAD50Q92878 1312 aa16.85■□□□□ 0.29
SMAD9-204ENST00000483941 SPEF2Q9C093 1822 aa16.84■□□□□ 0.29
SMAD9-204ENST00000483941 G3V3G9 751 aa16.84■□□□□ 0.29
SMAD9-204ENST00000483941 MAP3K12Q12852 859 aa16.84■□□□□ 0.29
SMAD9-204ENST00000483941 DCAF8Q5TAQ9 597 aa16.84■□□□□ 0.29
SMAD9-204ENST00000483941 COA1Q9GZY4 146 aa16.84■□□□□ 0.29
SMAD9-204ENST00000483941 VPS33BQ9H267 617 aa16.84■□□□□ 0.29
SMAD9-204ENST00000483941 HMG20BQ9P0W2 317 aa16.84■□□□□ 0.29
SMAD9-204ENST00000483941 TLL2Q9Y6L7 1015 aa16.84■□□□□ 0.29
SMAD9-204ENST00000483941 ARAP2Q8WZ64 1704 aa16.84■□□□□ 0.29
SMAD9-204ENST00000483941 SNAP23O00161 211 aa16.83■□□□□ 0.28
SMAD9-204ENST00000483941 TRAF5O00463 557 aa16.83■□□□□ 0.28
SMAD9-204ENST00000483941 EPS15P42566 896 aa16.83■□□□□ 0.28
SMAD9-204ENST00000483941 ZAP70P43403 619 aa16.83■□□□□ 0.28
SMAD9-204ENST00000483941 RASGRF1Q13972 1273 aa16.83■□□□□ 0.28
SMAD9-204ENST00000483941 CST9Q5W186 159 aa16.83■□□□□ 0.28
SMAD9-204ENST00000483941 SPTY2D1Q68D10 685 aaPredicted RBP16.83■□□□□ 0.28
SMAD9-204ENST00000483941 USP50Q70EL3 339 aaPredicted RBP16.83■□□□□ 0.28
SMAD9-204ENST00000483941 WDR66Q8TBY9 1149 aa16.83■□□□□ 0.28
SMAD9-204ENST00000483941 ESYT1Q9BSJ8 1104 aa16.83■□□□□ 0.28
SMAD9-204ENST00000483941 RTFDC1Q9BY42 306 aaPredicted RBP16.83■□□□□ 0.28
SMAD9-204ENST00000483941 POLLQ9UGP5 575 aa16.83■□□□□ 0.28
SMAD9-204ENST00000483941 PDE4DIPQ5VU43 2346 aa16.82■□□□□ 0.28
SMAD9-204ENST00000483941 TAF1P21675 1872 aa16.82■□□□□ 0.28
SMAD9-204ENST00000483941 RNF113AO15541 343 aaKnown RBP16.82■□□□□ 0.28
SMAD9-204ENST00000483941 CA12O43570 354 aa16.82■□□□□ 0.28
SMAD9-204ENST00000483941 AOC2O75106 756 aa16.82■□□□□ 0.28
SMAD9-204ENST00000483941 MAP2K2P36507 400 aa16.82■□□□□ 0.28
SMAD9-204ENST00000483941 LARGE2Q8N3Y3 721 aa16.82■□□□□ 0.28
SMAD9-204ENST00000483941 SNRKQ9NRH2 765 aa16.82■□□□□ 0.28
SMAD9-204ENST00000483941 HELLSQ9NRZ9 838 aa16.82■□□□□ 0.28
SMAD9-204ENST00000483941 COL4A1P02462 1669 aa16.81■□□□□ 0.28
SMAD9-204ENST00000483941 IRS2Q9Y4H2 1338 aa16.81■□□□□ 0.28
SMAD9-204ENST00000483941 CYP2E1P05181 493 aaPredicted RBP16.81■□□□□ 0.28
SMAD9-204ENST00000483941 SCARF1Q14162 830 aa16.81■□□□□ 0.28
SMAD9-204ENST00000483941 CWC27Q6UX04 472 aaKnown RBP16.81■□□□□ 0.28
SMAD9-204ENST00000483941 TDRD7Q8NHU6 1098 aaKnown RBP16.81■□□□□ 0.28
SMAD9-204ENST00000483941 TBC1D22AQ8WUA7 517 aa16.81■□□□□ 0.28
SMAD9-204ENST00000483941 MCOLN1Q9GZU1 580 aa16.81■□□□□ 0.28
SMAD9-204ENST00000483941 LRP2BPQ9P2M1 347 aa16.81■□□□□ 0.28
SMAD9-204ENST00000483941 LRRC37AA6NMS7 1700 aa16.8■□□□□ 0.28
SMAD9-204ENST00000483941 SGSM2O43147 1006 aa16.8■□□□□ 0.28
SMAD9-204ENST00000483941 IL1R1P14778 569 aa16.8■□□□□ 0.28
SMAD9-204ENST00000483941 MCCP23508 829 aa16.8■□□□□ 0.28
SMAD9-204ENST00000483941 UBE3CQ15386 1083 aa16.8■□□□□ 0.28
SMAD9-204ENST00000483941 MCMDC2Q4G0Z9 681 aa16.8■□□□□ 0.28
SMAD9-204ENST00000483941 CD209Q9NNX6 404 aa16.8■□□□□ 0.28
SMAD9-204ENST00000483941 TSHZ2Q9NRE2 1034 aa16.8■□□□□ 0.28
SMAD9-204ENST00000483941 SALL1Q9NSC2 1324 aa16.79■□□□□ 0.28
SMAD9-204ENST00000483941 IDH1O75874 414 aaKnown RBP16.79■□□□□ 0.28
SMAD9-204ENST00000483941 PODNQ7Z5L7 613 aa16.79■□□□□ 0.28
SMAD9-204ENST00000483941 NIM1KQ8IY84 436 aa16.79■□□□□ 0.28
SMAD9-204ENST00000483941 EDC3Q96F86 508 aaKnown RBP16.79■□□□□ 0.28
SMAD9-204ENST00000483941 SLC9C2Q5TAH2 1124 aa16.78■□□□□ 0.28
SMAD9-204ENST00000483941 ERICH6Q7L0X2 663 aa16.78■□□□□ 0.28
SMAD9-204ENST00000483941 SAPCD2Q86UD0 394 aa16.78■□□□□ 0.28
SMAD9-204ENST00000483941 IL27Q8NEV9 243 aa16.78■□□□□ 0.28
SMAD9-204ENST00000483941 APPBP2Q92624 585 aa16.78■□□□□ 0.28
SMAD9-204ENST00000483941 C22orf23Q9BZE7 217 aa16.78■□□□□ 0.28
SMAD9-204ENST00000483941 ANTXR1Q9H6X2 564 aa16.78■□□□□ 0.28
SMAD9-204ENST00000483941 ANO2Q9NQ90 1003 aa16.78■□□□□ 0.28
SMAD9-204ENST00000483941 ADARB2Q9NS39 739 aaKnown RBP16.78■□□□□ 0.28
SMAD9-204ENST00000483941 SUGT1Q9Y2Z0 365 aa16.78■□□□□ 0.28
SMAD9-204ENST00000483941 A0A1B0GUL6 1792 aa16.78■□□□□ 0.28
SMAD9-204ENST00000483941 CELF2O95319 508 aaKnown RBP16.77■□□□□ 0.28
SMAD9-204ENST00000483941 KLRK1P26718 216 aa16.77■□□□□ 0.28
SMAD9-204ENST00000483941 NMIQ13287 307 aaPredicted RBP16.77■□□□□ 0.28
SMAD9-204ENST00000483941 ZMYM1Q5SVZ6 1142 aa16.77■□□□□ 0.28
SMAD9-204ENST00000483941 TXNRD3Q86VQ6 643 aa16.77■□□□□ 0.28
SMAD9-204ENST00000483941 SLF2Q8IX21 1173 aa16.77■□□□□ 0.28
SMAD9-204ENST00000483941 GPRC5DQ9NZD1 345 aa16.77■□□□□ 0.28
SMAD9-204ENST00000483941 ABCF2Q9UG63 623 aa16.77■□□□□ 0.28
SMAD9-204ENST00000483941 NDUFB9Q9Y6M9 179 aa16.77■□□□□ 0.28
SMAD9-204ENST00000483941 AK9Q5TCS8 1911 aa16.76■□□□□ 0.27
SMAD9-204ENST00000483941 WTIPA6NIX2 430 aaPredicted RBP16.76■□□□□ 0.27
SMAD9-204ENST00000483941 RIMBP2O15034 1052 aa16.76■□□□□ 0.27
SMAD9-204ENST00000483941 PPIP5K2O43314 1243 aa16.76■□□□□ 0.27
SMAD9-204ENST00000483941 SEC24BO95487 1268 aa16.76■□□□□ 0.27
SMAD9-204ENST00000483941 ADD2P35612 726 aa16.76■□□□□ 0.27
SMAD9-204ENST00000483941 GSTO1P78417 241 aa16.76■□□□□ 0.27
SMAD9-204ENST00000483941 KIAA2012Q0VF49 1180 aa16.76■□□□□ 0.27
SMAD9-204ENST00000483941 CHAF1AQ13111 956 aaPredicted RBP16.76■□□□□ 0.27
SMAD9-204ENST00000483941 DGKZQ13574 1117 aa16.76■□□□□ 0.27
SMAD9-204ENST00000483941 PI16Q6UXB8 463 aa16.76■□□□□ 0.27
SMAD9-204ENST00000483941 SLC51AQ86UW1 340 aa16.76■□□□□ 0.27
SMAD9-204ENST00000483941 HHIPL1Q96JK4 782 aa16.76■□□□□ 0.27
SMAD9-204ENST00000483941 PIH1D3Q9NQM4 214 aaKnown RBP16.76■□□□□ 0.27
SMAD9-204ENST00000483941 RAI14Q9P0K7 980 aa16.76■□□□□ 0.27
SMAD9-204ENST00000483941 IQSEC3Q9UPP2 1182 aaPredicted RBP16.76■□□□□ 0.27
SMAD9-204ENST00000483941 FAM205AQ6ZU69 1335 aa16.75■□□□□ 0.27
SMAD9-204ENST00000483941 CERS3Q8IU89 383 aa16.75■□□□□ 0.27
SMAD9-204ENST00000483941 TBC1D32Q96NH3 1257 aa16.75■□□□□ 0.27
SMAD9-204ENST00000483941 USP26Q9BXU7 913 aa16.75■□□□□ 0.27
SMAD9-204ENST00000483941 DUOX1Q9NRD9 1551 aa16.74■□□□□ 0.27
SMAD9-204ENST00000483941 LDHBP07195 334 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 1047.2 ms