RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 GNAI3P08754 354 aa24.75■■□□□ 1.55
HPS4-213ENST00000483631 RASA3Q14644 834 aa24.75■■□□□ 1.55
HPS4-213ENST00000483631 MCOLN1Q9GZU1 580 aa24.75■■□□□ 1.55
HPS4-213ENST00000483631 LRRFIP2Q9Y608 721 aaKnown RBP24.75■■□□□ 1.55
HPS4-213ENST00000483631 AOX1Q06278 1338 aa24.75■■□□□ 1.55
HPS4-213ENST00000483631 IL15P40933 162 aaPredicted RBP24.74■■□□□ 1.55
HPS4-213ENST00000483631 CHAF1AQ13111 956 aaPredicted RBP24.74■■□□□ 1.55
HPS4-213ENST00000483631 PRKG1Q13976 671 aa24.74■■□□□ 1.55
HPS4-213ENST00000483631 NOM1Q5C9Z4 860 aaKnown RBP24.74■■□□□ 1.55
HPS4-213ENST00000483631 SPRYD7Q5W111 196 aa24.74■■□□□ 1.55
HPS4-213ENST00000483631 COPRSQ9NQ92 184 aa24.74■■□□□ 1.55
HPS4-213ENST00000483631 CEP126Q9P2H0 1117 aa24.74■■□□□ 1.55
HPS4-213ENST00000483631 IQSEC3Q9UPP2 1182 aaPredicted RBP24.74■■□□□ 1.55
HPS4-213ENST00000483631 ZBTB48P10074 688 aaPredicted RBP24.73■■□□□ 1.55
HPS4-213ENST00000483631 IREB2P48200 963 aaKnown RBP24.73■■□□□ 1.55
HPS4-213ENST00000483631 TNNI2P48788 182 aa24.73■■□□□ 1.55
HPS4-213ENST00000483631 INHBEP58166 350 aa24.73■■□□□ 1.55
HPS4-213ENST00000483631 NBPF12Q5TAG4 269 aaPredicted RBP24.73■■□□□ 1.55
HPS4-213ENST00000483631 WDR66Q8TBY9 1149 aa24.73■■□□□ 1.55
HPS4-213ENST00000483631 TEKT1Q969V4 418 aa24.73■■□□□ 1.55
HPS4-213ENST00000483631 SLC10A4Q96EP9 437 aa24.73■■□□□ 1.55
HPS4-213ENST00000483631 MEIS3Q99687 375 aa24.73■■□□□ 1.55
HPS4-213ENST00000483631 CFHR5Q9BXR6 569 aa24.73■■□□□ 1.55
HPS4-213ENST00000483631 TDRD3Q9H7E2 651 aaKnown RBP24.73■■□□□ 1.55
HPS4-213ENST00000483631 DGKZQ13574 1117 aa24.72■■□□□ 1.55
HPS4-213ENST00000483631 ZDHHC15Q96MV8 337 aa24.72■■□□□ 1.55
HPS4-213ENST00000483631 MTX1Q13505 466 aa24.71■■□□□ 1.55
HPS4-213ENST00000483631 GRIK5Q16478 980 aa24.71■■□□□ 1.55
HPS4-213ENST00000483631 ATP2B3Q16720 1220 aa24.71■■□□□ 1.55
HPS4-213ENST00000483631 FKBP1CQ5VVH2 108 aa24.71■■□□□ 1.55
HPS4-213ENST00000483631 HHIPL2Q6UWX4 724 aa24.71■■□□□ 1.55
HPS4-213ENST00000483631 MANSC4A6NHS7 340 aaPredicted RBP24.7■■□□□ 1.54
HPS4-213ENST00000483631 ATF7IPQ6VMQ6 1270 aa24.7■■□□□ 1.54
HPS4-213ENST00000483631 ANKRD13AQ8IZ07 590 aa24.7■■□□□ 1.54
HPS4-213ENST00000483631 TEPSINQ96N21 525 aa24.7■■□□□ 1.54
HPS4-213ENST00000483631 SIL1Q9H173 461 aa24.7■■□□□ 1.54
HPS4-213ENST00000483631 GNL3LQ9NVN8 582 aaKnown RBP24.7■■□□□ 1.54
HPS4-213ENST00000483631 SEMA3EO15041 775 aa24.69■■□□□ 1.54
HPS4-213ENST00000483631 USP2O75604 605 aaPredicted RBP24.69■■□□□ 1.54
HPS4-213ENST00000483631 ALDH1A1P00352 501 aa24.69■■□□□ 1.54
HPS4-213ENST00000483631 TRIM27P14373 513 aa24.69■■□□□ 1.54
HPS4-213ENST00000483631 FAM83AQ86UY5 434 aa24.68■■□□□ 1.54
HPS4-213ENST00000483631 WNK4Q96J92 1243 aa24.68■■□□□ 1.54
HPS4-213ENST00000483631 TMOD2Q9NZR1 351 aa24.68■■□□□ 1.54
HPS4-213ENST00000483631 FZD1Q9UP38 647 aa24.68■■□□□ 1.54
HPS4-213ENST00000483631 OTOFQ9HC10 1997 aa24.67■■□□□ 1.54
HPS4-213ENST00000483631 SALL1Q9NSC2 1324 aa24.66■■□□□ 1.54
HPS4-213ENST00000483631 DIEXFQ68CQ4 756 aaKnown RBP24.66■■□□□ 1.54
HPS4-213ENST00000483631 APOBEC3HQ6NTF7 200 aaKnown RBP24.66■■□□□ 1.54
HPS4-213ENST00000483631 CTU1Q7Z7A3 348 aaKnown RBP24.66■■□□□ 1.54
HPS4-213ENST00000483631 CLMNQ96JQ2 1002 aa24.66■■□□□ 1.54
HPS4-213ENST00000483631 PA2G4Q9UQ80 394 aaKnown RBP24.66■■□□□ 1.54
HPS4-213ENST00000483631 RPAP1Q9BWH6 1393 aaPredicted RBP24.66■■□□□ 1.54
HPS4-213ENST00000483631 CCDC85CA6NKD9 419 aa24.65■■□□□ 1.54
HPS4-213ENST00000483631 TCP10L2B9ZVM9 353 aa24.65■■□□□ 1.54
HPS4-213ENST00000483631 MKRN3Q13064 507 aaKnown RBP24.65■■□□□ 1.54
HPS4-213ENST00000483631 MIER1Q8N108 512 aa24.65■■□□□ 1.54
HPS4-213ENST00000483631 HOOK2Q96ED9 719 aa24.65■■□□□ 1.54
HPS4-213ENST00000483631 DENND2AQ9ULE3 1009 aa24.65■■□□□ 1.54
HPS4-213ENST00000483631 SRGAP3O43295 1099 aa24.64■■□□□ 1.54
HPS4-213ENST00000483631 BCAR3O75815 825 aa24.64■■□□□ 1.54
HPS4-213ENST00000483631 TMEM39BQ9GZU3 492 aa24.64■■□□□ 1.54
HPS4-213ENST00000483631 PDS5AQ29RF7 1337 aaKnown RBP24.63■■□□□ 1.53
HPS4-213ENST00000483631 GPR25O00155 361 aa24.63■■□□□ 1.53
HPS4-213ENST00000483631 TBC1D8O95759 1140 aa24.63■■□□□ 1.53
HPS4-213ENST00000483631 GNAI2P04899 355 aa24.63■■□□□ 1.53
HPS4-213ENST00000483631 RGS19P49795 217 aa24.63■■□□□ 1.53
HPS4-213ENST00000483631 HNRNPUQ00839 825 aaKnown RBP eCLIP24.63■■□□□ 1.53
HPS4-213ENST00000483631 PKN2Q16513 984 aaKnown RBP24.63■■□□□ 1.53
HPS4-213ENST00000483631 AKAP2Q9Y2D5 859 aa24.63■■□□□ 1.53
HPS4-213ENST00000483631 ZKSCAN2Q63HK3 967 aa24.62■■□□□ 1.53
HPS4-213ENST00000483631 IFNL1Q8IU54 200 aa24.62■■□□□ 1.53
HPS4-213ENST00000483631 ZGPATQ8N5A5 531 aaKnown RBP24.62■■□□□ 1.53
HPS4-213ENST00000483631 ZNF296Q8WUU4 475 aaPredicted RBP24.62■■□□□ 1.53
HPS4-213ENST00000483631 FRAT1Q92837 279 aaPredicted RBP24.62■■□□□ 1.53
HPS4-213ENST00000483631 TESPA1A2RU30 521 aaPredicted RBP24.61■■□□□ 1.53
HPS4-213ENST00000483631 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.61■■□□□ 1.53
HPS4-213ENST00000483631 LDHBP07195 334 aaKnown RBP24.6■■□□□ 1.53
HPS4-213ENST00000483631 PHKA1P46020 1223 aa24.6■■□□□ 1.53
HPS4-213ENST00000483631 MAP3K9P80192 1104 aa24.6■■□□□ 1.53
HPS4-213ENST00000483631 CCDC102BQ68D86 513 aa24.6■■□□□ 1.53
HPS4-213ENST00000483631 OTUD7BQ6GQQ9 843 aa24.6■■□□□ 1.53
HPS4-213ENST00000483631 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.6■■□□□ 1.53
HPS4-213ENST00000483631 CDAN1Q8IWY9 1227 aa24.6■■□□□ 1.53
HPS4-213ENST00000483631 DAGLAQ9Y4D2 1042 aa24.59■■□□□ 1.53
HPS4-213ENST00000483631 FKTNO75072 461 aa24.58■■□□□ 1.53
HPS4-213ENST00000483631 PRDX5P30044 214 aa24.58■■□□□ 1.53
HPS4-213ENST00000483631 GJA5P36382 358 aa24.58■■□□□ 1.53
HPS4-213ENST00000483631 CSADQ9Y600 493 aa24.58■■□□□ 1.53
HPS4-213ENST00000483631 MYH2Q9UKX2 1941 aa24.58■■□□□ 1.53
HPS4-213ENST00000483631 A0A1B0GUL7 405 aa24.57■■□□□ 1.52
HPS4-213ENST00000483631 CACNB3P54284 484 aa24.57■■□□□ 1.52
HPS4-213ENST00000483631 MVPQ14764 893 aaKnown RBP24.57■■□□□ 1.52
HPS4-213ENST00000483631 DCAF15Q66K64 600 aa24.57■■□□□ 1.52
HPS4-213ENST00000483631 FAM151AQ8WW52 585 aa24.57■■□□□ 1.52
HPS4-213ENST00000483631 CLUAP1Q96AJ1 413 aa24.57■■□□□ 1.52
HPS4-213ENST00000483631 OPTNQ96CV9 577 aa24.57■■□□□ 1.52
HPS4-213ENST00000483631 ELP3Q9H9T3 547 aa24.57■■□□□ 1.52
HPS4-213ENST00000483631 IGF2BP3O00425 579 aaKnown RBP eCLIP24.56■■□□□ 1.52
HPS4-213ENST00000483631 ADORA1P30542 326 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms