RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 MS4A4AQ96JQ5 239 aa9.38□□□□□ -0.91
CSDE1-206ENST00000483030 TDRD3Q9H7E2 651 aaKnown RBP9.38□□□□□ -0.91
CSDE1-206ENST00000483030 TTF2Q9UNY4 1162 aaKnown RBP9.38□□□□□ -0.91
CSDE1-206ENST00000483030 FAM205AQ6ZU69 1335 aa9.37□□□□□ -0.91
CSDE1-206ENST00000483030 FANCIQ9NVI1 1328 aa9.37□□□□□ -0.91
CSDE1-206ENST00000483030 TCP10L2B9ZVM9 353 aa9.37□□□□□ -0.91
CSDE1-206ENST00000483030 HIBADHP31937 336 aaKnown RBP9.37□□□□□ -0.91
CSDE1-206ENST00000483030 GYG1P46976 350 aa9.37□□□□□ -0.91
CSDE1-206ENST00000483030 EXOSC9Q06265 439 aaKnown RBP9.37□□□□□ -0.91
CSDE1-206ENST00000483030 TNFAIP1Q13829 316 aa9.37□□□□□ -0.91
CSDE1-206ENST00000483030 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.37□□□□□ -0.91
CSDE1-206ENST00000483030 DZIP1LQ8IYY4 767 aaKnown RBP9.37□□□□□ -0.91
CSDE1-206ENST00000483030 BRI3BPQ8WY22 251 aa9.37□□□□□ -0.91
CSDE1-206ENST00000483030 TEPSINQ96N21 525 aa9.37□□□□□ -0.91
CSDE1-206ENST00000483030 TMEM106CQ9BVX2 250 aa9.37□□□□□ -0.91
CSDE1-206ENST00000483030 SALL2Q9Y467 1007 aaPredicted RBP9.37□□□□□ -0.91
CSDE1-206ENST00000483030 CCL15-CCL14A0A0B4J2E2 113 aa9.36□□□□□ -0.91
CSDE1-206ENST00000483030 GRM8O00222 908 aa9.36□□□□□ -0.91
CSDE1-206ENST00000483030 MAP3K9P80192 1104 aa9.36□□□□□ -0.91
CSDE1-206ENST00000483030 UBE4AQ14139 1066 aa9.36□□□□□ -0.91
CSDE1-206ENST00000483030 TAF1CQ15572 869 aaPredicted RBP9.36□□□□□ -0.91
CSDE1-206ENST00000483030 CCL15Q16663 113 aa9.36□□□□□ -0.91
CSDE1-206ENST00000483030 FAM84BQ96KN1 310 aaPredicted RBP9.36□□□□□ -0.91
CSDE1-206ENST00000483030 TMEM39BQ9GZU3 492 aa9.36□□□□□ -0.91
CSDE1-206ENST00000483030 ZFYVE28Q9HCC9 887 aa9.36□□□□□ -0.91
CSDE1-206ENST00000483030 C9orf78Q9NZ63 289 aaPredicted RBP9.36□□□□□ -0.91
CSDE1-206ENST00000483030 SERPINA10Q9UK55 444 aa9.36□□□□□ -0.91
CSDE1-206ENST00000483030 MYCP01106 439 aaPredicted RBP9.35□□□□□ -0.91
CSDE1-206ENST00000483030 CRKP46108 304 aa9.35□□□□□ -0.91
CSDE1-206ENST00000483030 GTF2A2P52657 109 aa9.35□□□□□ -0.91
CSDE1-206ENST00000483030 VGLL4Q14135 290 aa9.35□□□□□ -0.91
CSDE1-206ENST00000483030 ARHGEF6Q15052 776 aa9.35□□□□□ -0.91
CSDE1-206ENST00000483030 GRIK5Q16478 980 aa9.35□□□□□ -0.91
CSDE1-206ENST00000483030 SLC4A8Q2Y0W8 1093 aa9.35□□□□□ -0.91
CSDE1-206ENST00000483030 SLC9C1Q4G0N8 1177 aa9.35□□□□□ -0.91
CSDE1-206ENST00000483030 NBPF11Q86T75 865 aa9.35□□□□□ -0.91
CSDE1-206ENST00000483030 FAM43AQ8N2R8 423 aa9.35□□□□□ -0.91
CSDE1-206ENST00000483030 ZNF333Q96JL9 665 aa9.35□□□□□ -0.91
CSDE1-206ENST00000483030 PUS3Q9BZE2 481 aaKnown RBP9.35□□□□□ -0.91
CSDE1-206ENST00000483030 TAOK2Q9UL54 1235 aa9.35□□□□□ -0.91
CSDE1-206ENST00000483030 IQSEC3Q9UPP2 1182 aaPredicted RBP9.35□□□□□ -0.91
CSDE1-206ENST00000483030 CSADQ9Y600 493 aa9.35□□□□□ -0.91
CSDE1-206ENST00000483030 PTCH2Q9Y6C5 1203 aa9.35□□□□□ -0.91
CSDE1-206ENST00000483030 ZNF646O15015 1829 aaPredicted RBP9.35□□□□□ -0.91
CSDE1-206ENST00000483030 SPEF2Q9C093 1822 aa9.34□□□□□ -0.91
CSDE1-206ENST00000483030 TNNI2P48788 182 aa9.34□□□□□ -0.91
CSDE1-206ENST00000483030 CHAF1AQ13111 956 aaPredicted RBP9.34□□□□□ -0.91
CSDE1-206ENST00000483030 SLC4A10Q6U841 1118 aa9.34□□□□□ -0.91
CSDE1-206ENST00000483030 WDR63Q8IWG1 891 aa9.34□□□□□ -0.91
CSDE1-206ENST00000483030 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.34□□□□□ -0.91
CSDE1-206ENST00000483030 OTUD5Q96G74 571 aa9.34□□□□□ -0.91
CSDE1-206ENST00000483030 RIPOR2Q9Y4F9 1068 aa9.34□□□□□ -0.91
CSDE1-206ENST00000483030 FRAT2O75474 233 aaPredicted RBP9.33□□□□□ -0.92
CSDE1-206ENST00000483030 ALDH1L1O75891 902 aa9.33□□□□□ -0.92
CSDE1-206ENST00000483030 CACNB3P54284 484 aa9.33□□□□□ -0.92
CSDE1-206ENST00000483030 FBXO33Q7Z6M2 555 aa9.33□□□□□ -0.92
CSDE1-206ENST00000483030 VPS37DQ86XT2 251 aa9.33□□□□□ -0.92
CSDE1-206ENST00000483030 KAZALD1Q96I82 304 aa9.33□□□□□ -0.92
CSDE1-206ENST00000483030 SUCLG2Q96I99 432 aa9.33□□□□□ -0.92
CSDE1-206ENST00000483030 ARHGAP39Q9C0H5 1083 aa9.33□□□□□ -0.92
CSDE1-206ENST00000483030 SPDYE5A6NIY4 337 aa9.32□□□□□ -0.92
CSDE1-206ENST00000483030 TLR2O60603 784 aa9.32□□□□□ -0.92
CSDE1-206ENST00000483030 WDHD1O75717 1129 aaPredicted RBP9.32□□□□□ -0.92
CSDE1-206ENST00000483030 ECM2O94769 699 aaPredicted RBP9.32□□□□□ -0.92
CSDE1-206ENST00000483030 NBPF7P0C2Y1 421 aaPredicted RBP9.32□□□□□ -0.92
CSDE1-206ENST00000483030 CETPP11597 493 aa9.32□□□□□ -0.92
CSDE1-206ENST00000483030 FXR1P51114 621 aaKnown RBP eCLIP9.32□□□□□ -0.926e-6■■■□□ 17.1
CSDE1-206ENST00000483030 HDLBPQ00341 1268 aaKnown RBP9.32□□□□□ -0.92
CSDE1-206ENST00000483030 KIF22Q14807 665 aa9.32□□□□□ -0.92
CSDE1-206ENST00000483030 ERO1BQ86YB8 467 aa9.32□□□□□ -0.92
CSDE1-206ENST00000483030 SH3TC2Q8TF17 1288 aa9.32□□□□□ -0.92
CSDE1-206ENST00000483030 ZKSCAN4Q969J2 545 aaPredicted RBP9.32□□□□□ -0.92
CSDE1-206ENST00000483030 TEKT1Q969V4 418 aa9.32□□□□□ -0.92
CSDE1-206ENST00000483030 WRNIP1Q96S55 665 aa9.32□□□□□ -0.92
CSDE1-206ENST00000483030 SRCIN1Q9C0H9 1055 aa9.32□□□□□ -0.92
CSDE1-206ENST00000483030 MRS2Q9HD23 443 aa9.32□□□□□ -0.92
CSDE1-206ENST00000483030 FBXO3Q9UK99 471 aa9.32□□□□□ -0.92
CSDE1-206ENST00000483030 COLQQ9Y215 455 aaPredicted RBP9.32□□□□□ -0.92
CSDE1-206ENST00000483030 SNCAIPQ9Y6H5 919 aa9.32□□□□□ -0.92
CSDE1-206ENST00000483030 MYH3P11055 1940 aa9.32□□□□□ -0.92
CSDE1-206ENST00000483030 MROH5Q6ZUA9 1318 aa9.31□□□□□ -0.92
CSDE1-206ENST00000483030 KIAA0100Q14667 2235 aaKnown RBP9.31□□□□□ -0.92
CSDE1-206ENST00000483030 BTBD19C9JJ37 291 aa9.31□□□□□ -0.92
CSDE1-206ENST00000483030 IRF6O14896 467 aa9.31□□□□□ -0.92
CSDE1-206ENST00000483030 BCAMP50895 628 aa9.31□□□□□ -0.92
CSDE1-206ENST00000483030 LACTBP83111 547 aaPredicted RBP9.31□□□□□ -0.92
CSDE1-206ENST00000483030 LRRC24Q50LG9 513 aa9.31□□□□□ -0.92
CSDE1-206ENST00000483030 CAVIN4Q5BKX8 364 aa9.31□□□□□ -0.92
CSDE1-206ENST00000483030 METTL24Q5JXM2 366 aa9.31□□□□□ -0.92
CSDE1-206ENST00000483030 MIGA2Q7L4E1 593 aa9.31□□□□□ -0.92
CSDE1-206ENST00000483030 TBC1D22AQ8WUA7 517 aa9.31□□□□□ -0.92
CSDE1-206ENST00000483030 TMOD2Q9NZR1 351 aa9.31□□□□□ -0.92
CSDE1-206ENST00000483030 HTTP42858 3142 aa9.31□□□□□ -0.92
CSDE1-206ENST00000483030 H0YGN5 161 aa9.3□□□□□ -0.92
CSDE1-206ENST00000483030 PPIL2Q13356 520 aa9.3□□□□□ -0.92
CSDE1-206ENST00000483030 SNAPC2Q13487 334 aa9.3□□□□□ -0.92
CSDE1-206ENST00000483030 APOBEC3HQ6NTF7 200 aaKnown RBP9.3□□□□□ -0.92
CSDE1-206ENST00000483030 FAM83AQ86UY5 434 aa9.3□□□□□ -0.92
CSDE1-206ENST00000483030 ZDHHC15Q96MV8 337 aa9.3□□□□□ -0.92
CSDE1-206ENST00000483030 MRIQ9BWK5 157 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms